Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01990 ATGCCGGAAGAGGATTTGGTGGACATCAAATTTAGGTTGTACGATGGTTCCGATATCGGACCCTTCAGGTACTCCTCCGCCGCCACCGTCGATATGCTTAAGCAAAGGATTGTCTCCGATTGGCCCAAAGGTAAAACTGTCGTGCCAAAGTCAGCTAATGAAGTGAAATTGATTAGCTCTGGTAAAATCTTGGAAAACAATAAGACTGTTGGTCAATGTAAAGTACCGTTTGGTGAGACTGCAGGGGGTGTTATAATAATGCATGTTGTTGTACAGCCATCTCTATCAAAAACTAAAGCTGATAAGAAGGTCGATGATTCGCCCAAGAAGGTTGTCTGTTCTTGTTCCATATTGTGA 357 0.4314 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPKGKTVVPKSANEVKLISSGKILENNKTVGQCKVPFGETAGGVIIMHVVVQPSLSKTKADKKVDDSPKKVVCSCSIL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01990 118 Gene3D - 1 100 - -
Gma05g01990 118 PIRSF MUB 1 118 IPR017000 -
Gma05g01990 118 CDD Ubl_MUBs_plant 6 93 - -
Gma05g01990 118 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Gma05g01990 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 118 IPR040015 -
Gma05g01990 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 116 IPR039540 -
Gma05g01990 118 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 1 118 - -
Gma05g01990 118 SUPERFAMILY Ubiquitin-like 2 96 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01990 Gma-Chr5 41252614 41257231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01990 - - gmx:100810070 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01990 05 41252614 41257231 Gma05g01990 05 41252614 41257231 ECH
Gma05g01990 05 41252614 41257231 Gma08g00096 08 820461 829552 GST