Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01310 ATGAAGCTTTCTGTGTTCTGGTTTGCATGGGCTTTTTCTCTTCTAATTTCCATGGCTTCTGCTGCTACAGTAGAACACACTTTCATTGTTCAAAACAAGGCTGTCACACGCTTGTGCAAAGAGCGAGTGATTGTCACAGTGAATGGACTTTACCCTGGACCAAGGATAGATGTCCGAGAAGGGGACGCTGTGGTTGTTCACGTAATCAACAAGTCACCCTACAATATCACTATTCATTGGCATGGAGTGTTTCAGCTCTTTAGTGCATGGGCAGATGGTCCTGAATATATAACCCAATGCAATATTCGTCCTCAAAATAGTTATACCTATAAATTCAATGTTATACAACAAGAAGGTACATTGTGGTGGCATGCTCACTCAGGAGTTTTACGTGCCACGGTTCATGGTGCTTTCATCATTCACCCTCGTTCGGGTCTGTTTCCTTTTCCCAAACCCCACAAACAAGTACCAATAATATTAGGTGATTGGTATGACGGTAATATTGTGGATATTTATCAGCAAGTACTCCTTCTCGGGGATGTAAGGCCCTCTGCTGCCTACACCATCAATGGTTTGCCTGGTGATCTCTACAATTGCTCTAGAAATCAGATGTTCAAGCTAAAGGTAAAGCCAGGGAAGACCTACTTGCTAAGAATGATCAACGCTGCATTCAATAACAACCTTTTCGTCAAGATAGCCAACCACAGCTTCACAGTTGTTGCCATGGACGCTTCCTACATCGAACCCTATGTGACCGACATCATCACCATCGCCCCTGGCCAAACTGCTGACGTGCTCTTCAAAGCCGACCAACCCATAGGCTCATATTACATGGCAGCCTCTCCTTACGTTGTGGGCCAGCCAGAAGCCCTATTCGACACCACGACAACTCGCGGCATTGTCGCTTACGAAGGCTACACGACATCATTAAAAGACTCGAAGCCCATTGTGCCACTACTTCCACCCTTCAACGCCACACCAATTGCTCACAAATTTTTTAGCAACATCACGAGCTTGGTGGGGGGCCCACATTGGGTCCCGGTCCCACTTGAGGTGGACCAGCACATGTTCATCACCATTAACATTAACCTAGAAAGGTGTCCCAGGAATGGCACGTGTCAAGGTGTATTTGGACAGAAATTCTCCGCAAGCATGAACAATGAATCATTTGTGCACCCCGTTGGAAAAGGGTACTCTATGTTGGAAGCATCGTTTTATAATGTGAGTGGTGTGTATACTACTGATTTCCCTGACAAGCCTCCAATCATATTTGATTTCACAAACCCTAAAATTGCTTTGGATACGAAGTATTTGTTTACGCCGCCAAAATCGACCAAGGTGAAGAAACTCAAGTTCAATTCGACCGTGGAGGTTGTGTTTCAAAATACACAAATTATGAATGCGCAAAGCCACCCCATGCACCTTCATGGGTTTAGTTTCCATGTTTTGGCTCAAGATTTTGGGAATTTCAATTACACCAAAGATAAATACAAGTTTAATTTGGTGAATCCAATATTTCGCAACACGATTGCTGTGCCAGCTGGAGGATGGGCTGTTATAAGATTCAAAGCTAACAATCCAGGGATGTGGTTTGTGCATTGCCATGTGGATGATCATCAGTTATGGGGACTAGACATGGTTTTCGAGGTTGAGAATGGACCAACTCCTTCAACTTCTCTCCCTCCACCACCTGCTGATCTACCTAAATGTTAG 1713 0.4454 MKLSVFWFAWAFSLLISMASAATVEHTFIVQNKAVTRLCKERVIVTVNGLYPGPRIDVREGDAVVVHVINKSPYNITIHWHGVFQLFSAWADGPEYITQCNIRPQNSYTYKFNVIQQEGTLWWHAHSGVLRATVHGAFIIHPRSGLFPFPKPHKQVPIILGDWYDGNIVDIYQQVLLLGDVRPSAAYTINGLPGDLYNCSRNQMFKLKVKPGKTYLLRMINAAFNNNLFVKIANHSFTVVAMDASYIEPYVTDIITIAPGQTADVLFKADQPIGSYYMAASPYVVGQPEALFDTTTTRGIVAYEGYTTSLKDSKPIVPLLPPFNATPIAHKFFSNITSLVGGPHWVPVPLEVDQHMFITININLERCPRNGTCQGVFGQKFSASMNNESFVHPVGKGYSMLEASFYNVSGVYTTDFPDKPPIIFDFTNPKIALDTKYLFTPPKSTKVKKLKFNSTVEVVFQNTQIMNAQSHPMHLHGFSFHVLAQDFGNFNYTKDKYKFNLVNPIFRNTIAVPAGGWAVIRFKANNPGMWFVHCHVDDHQLWGLDMVFEVENGPTPSTSLPPPPADLPKC 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01310 570 CDD CuRO_3_LCC_plant 411 553 IPR034289 GO:0005507
Gma07g01310 570 ProSitePatterns Multicopper oxidases signature 1. 528 548 IPR033138 -
Gma07g01310 570 SUPERFAMILY Cupredoxins 15 165 IPR008972 -
Gma07g01310 570 Gene3D - 15 142 IPR008972 -
Gma07g01310 570 Pfam Multicopper oxidase 30 144 IPR011707 GO:0005507
Gma07g01310 570 Pfam Multicopper oxidase 155 305 IPR001117 -
Gma07g01310 570 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Gma07g01310 570 Gene3D - 153 342 IPR008972 -
Gma07g01310 570 Pfam Multicopper oxidase 416 552 IPR011706 GO:0005507|GO:0016491
Gma07g01310 570 SUPERFAMILY Cupredoxins 149 341 IPR008972 -
Gma07g01310 570 CDD CuRO_2_LCC_plant 156 303 IPR034285 -
Gma07g01310 570 PANTHER MULTI-COPPER OXIDASE 1 570 IPR045087 -
Gma07g01310 570 SUPERFAMILY Cupredoxins 346 570 IPR008972 -
Gma07g01310 570 TIGRFAM laccase: laccase 22 570 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gma07g01310 570 Gene3D - 369 570 IPR008972 -
Gma07g01310 570 ProSitePatterns Multicopper oxidases signature 2. 533 544 IPR002355 GO:0005507
Gma07g01310 570 PANTHER LACCASE 1 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01310 Gma-Chr7 17313187 17318307 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01310 K05909 - gmx:100815453 1146.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01781 18 49606342 49612418 Gma07g01310 07 17313187 17318307 GST
Gma07g01310 07 17313187 17318307 Gma03g00659 03 20482752 20495339 PCT