Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00659 ATGACAATGTCGATAATAATAATAGCGATGACAATATCAATATTAGTGATAGTTGATGATTCTGGTGATGGTGGTGATAATGATAATAACGATTTCAGTGGTGTTGGTAATTACAACAACGATCATAATGACATAGTGACAATGATGGTGTTGGTGGGGGTAGAAGTAGTAACAATGTTAGAGGTGTTGACAATTACAATGTCAGAAGTGATGGTGGTGTTGAGGATAGTAATGATGCTAGTGAGTCAGAAACAAGCACTTCTCATAATTCGAAATTCCCGGTTAGGTCAAAATTGTAAGCTATTGTCGAATCCATGGGTTTTTGCTCTTGTGCTAGCTTCTTCGTTGGCTCATGCTGCGGTTGTGGAACACACTTTTAATGTGGAGGACATTACTGTGCAGCGTTTGTGTCGTCAACAATTGATCACTGCCGTTAATGGAACCCTACCAGGACCAACAATTAACGCTCGAGAGGGTGATACTATTGTCGTCCACGTATTCAACAAGTCACCCTATAATCTTACTCTTCATTGGCACGGTATTATTCAATTTTTAACTCCTTGGTCAGACGGTCCTGAATTTGTAACTCAATGCCCAATACCTTCCGGTAGCAGATACACATACAAATTTAACCTAACGGGACAAGAAGGGACTCTTTGGTGGCATGCACACTCATCATTTCTGCGTGCTACGGTCTATGGTGCTCTTTTAATTCGGCCTCGAGTTGGACACTCCTACCCTTTTCCTAAAGTATATCAAGAAGTCCCCATACTGCTTGGAGAGTGGTGGAATGCTAATGTTGTAGAGGTTGAGCACAATGCAACAGAATCCCAAACAGCGCCAATCCCCTCAGCTGCGTATACAATTAACGGTTTACCCGGCGATTCCTATAACTGCTCTGAAAATCAAATGTATCAGCTCAAAGTCAAGCAAGGAAAAACCTACTTGCTACGCATTATCAATGCTGCACTCAATGAGCAACACTTCTTCAAAATAGCAAATCACACATTCACAGTGGTAGCCATCGATGCTCTCTACACCCAACACTACAAAACTGATGTTGTAGTGCTTGCTCCAGGCCAAACCGTTGATGTCCTCTTTAGCACAAATCAACATGTGGATTCTTATTACATGGCATTCACTCCATACCATTCGGCCCCACAAATCCCAATCAACAACTCAACAACAAGAGGGCTGGTAATTTATGAGGGTGCCACATCAGTAGAAAAGCCCATATTGCCAAATCTACCGGCCCAAACCGACACACCAACGGCCCACAAGTTCTACACCAACATCACAGGGTTGGCTGGTGGACCCCACTGGGTCCCGGTGCCACGTCAGGTGGATGAGCACATGTTCATCACTTTTGGGCTTAACTTTGACCTTTGCAAAAATGTTTCAACACCAAATGGTTGCTCTGCAAGGCAACCTCCACTCTCTGCCAGCATGAACAATGAGTCATTTGTGTTGCCTCGGGGAAAAGGGTTATCAATGCTTGAAGCATTCTATAACAATGATGTTAACGGAGTGTACACTAGAGATTTTCCAAATCAGCCTCCGATTGTGTTTGACTATACCGACCCAAACATAACGAGCACTACAGAATTAGCCTTCAAAATCGCACCCAAATCAACGAAAGTGAAGACGTTGAAGTTCAATTCAACTGTTCAGATTGTACTTCAAAACACGGCCATTGTCTCTGCAGAGAACCACCCCATTCACATTCACGGCTTCAATTTCCATGTTTTGGCTCAAGGGTTCGGGAATTACAACGCCACTAGAGACGAGCCCAAGTTCAATCTTGTCAACCCTCAGATACGTAACACAATTTCTGTCCCCGTCGGAGGATGGTCCGTTGTTAGATTCCAAGCAAATAATCCAGGTGTTTGGCTTGTGCATTGCCATTTGGAAACTCATTTGCCGTGGGGGCTAGCCATGGCTTTCGAGGTTGAGAATGGGCCCACTCCTTCTTTATCAGTGCCTCCGCCTCCAGCTGATCTTCCTAGGGCTTTTGCTCTTTTTCTAGCATGTTCCTTGGCTTCTGGTGCTGTTGTGGAACACATTTTCAATGTGGAAAACATTACTGTGCAACGTTTGTGTCGTCAACAAGTGATCACTGCCGTCAATGGAACCCTGCCAGGACCAACAATTAACGCTCGAGAGGGTGACACTGTAGTCGTTCACGTATTCAACAAGTCACCCTATAATCTTACTATTCATTGGCACGGAATTTTTCAATTTTTAACACCGTGGTCAGACGGTCCTGAATTTGCAACTCAATGCCCAATAGCTTCTGGTAGCAGTTACACATACAGATTTAACCTAACTGGACAAGAAGGGACTCTTTGGTGGCATGCACACTCATCTTTTCTACGTGCTACGGTCTATGGTGCTCTTCTAATTCGGCCACGACTAGGACACTCGTACCCGTTTCCTAAAGTTTATCAAGAAATCCCTATACTAGTTGGAGAATGGTGGAATGCTAATGTTGTAGAGGTTGAGCAAAATGCAACAGAAACTCAACAGCCGCCAATTGAATCAGATGCATATACAATTAATGGTTTACCCAGCGATCTCTATAACTGCTCTCAGGATGGAACATACCAGGTCAAAGTAAAGCAAGGAAAAACCTACTTGTTGCGCATAATCAACTCTGCACTCAATAATCAACACTTTTTTGAAGTAGCCAACCATACATTAACCGTAGTTGCCATTGATGCTACCTATACCAATCACTACGACACCAAGGTTGTAGTGCTTGCTCCTGGCCAAACCGTTGATGTCCTCCTAAGAACAAACCAAAGTGTGGGTTCTTACTACATGGCCTTCACTCCATACCATTCCGCTCCACTTGTACAAATCAACGCCAACATGACTCGAGGAGTGATAATTTATGAGGGTGCCACGTCAGCAAAGCCCATCATGCCAGATCTCCCGGCCCAAACTGACACTCCAACGGCCCACAAGTTTTACACCAACATCACAGGGTTGGCCGGTGGGCCCCACTGGGTCCCAGTGCCACGTCAAGTGGATGAACACATGTTTATAACTTTTGGGCTTAGCTTTGACATATGTCGCAGTGATACAGGAGTTTGTCCTGGGCCAGTACCCTTATTTTCTGCAAACATGAACAACGAGTCCTTTGTGTTGCCACATGGCAAAGGGGTATCAATGCTTGAAGCGTTTTTCCGGAACGATGTTACTGGGGTGTACACTAGAGATTTTCCGGATCAGCCTGCGGTTGTGTTTGACTTTACCAACCCAAACATAACGTCGTCGCCAGATACACCTCGTGAATTCCTAATCGCACCTAAATCAACGAAGGTGAAGACGTTGAAGTTCAATTCAACAGTTCAGATTGTGCTTCAGAACACGGCCATCATTGCCGCTGAGAATCACCCTATTCACCTTCATGGCTTCAATTTTCATGTTTTGGCTCAAGGGTTTGGGAATTACAACGCCACTAGAGATGAACCCAAGTTCAATTTTGTGAATCCTCAAATACGTAACACAATTGCTGTGCCGGTCGGAGGATGGTCCGTCATTAGATTCCAAGCAAATAATCCAGGTGTTTGGCTTATGCATTGCCATTTGGAAACTCATTTGCCGTGGGGACTATCCACGGCTTTCGAGGTTGAAAACGGGCCTTCAATCAGAGTGCCTCCGCCACCGGCTGATCTTCCTAAGTGCTAA 3693 0.4471 MTMSIIIIAMTISILVIVDDSGDGGDNDNNDFSGVGNYNNDHNDIVTMMVLVGVEVVTMLEVLTITMSEVMVVLRIVMMLVSQKQALLIIRNSRLGQNCKLLSNPWVFALVLASSLAHAAVVEHTFNVEDITVQRLCRQQLITAVNGTLPGPTINAREGDTIVVHVFNKSPYNLTLHWHGIIQFLTPWSDGPEFVTQCPIPSGSRYTYKFNLTGQEGTLWWHAHSSFLRATVYGALLIRPRVGHSYPFPKVYQEVPILLGEWWNANVVEVEHNATESQTAPIPSAAYTINGLPGDSYNCSENQMYQLKVKQGKTYLLRIINAALNEQHFFKIANHTFTVVAIDALYTQHYKTDVVVLAPGQTVDVLFSTNQHVDSYYMAFTPYHSAPQIPINNSTTRGLVIYEGATSVEKPILPNLPAQTDTPTAHKFYTNITGLAGGPHWVPVPRQVDEHMFITFGLNFDLCKNVSTPNGCSARQPPLSASMNNESFVLPRGKGLSMLEAFYNNDVNGVYTRDFPNQPPIVFDYTDPNITSTTELAFKIAPKSTKVKTLKFNSTVQIVLQNTAIVSAENHPIHIHGFNFHVLAQGFGNYNATRDEPKFNLVNPQIRNTISVPVGGWSVVRFQANNPGVWLVHCHLETHLPWGLAMAFEVENGPTPSLSVPPPPADLPRAFALFLACSLASGAVVEHIFNVENITVQRLCRQQVITAVNGTLPGPTINAREGDTVVVHVFNKSPYNLTIHWHGIFQFLTPWSDGPEFATQCPIASGSSYTYRFNLTGQEGTLWWHAHSSFLRATVYGALLIRPRLGHSYPFPKVYQEIPILVGEWWNANVVEVEQNATETQQPPIESDAYTINGLPSDLYNCSQDGTYQVKVKQGKTYLLRIINSALNNQHFFEVANHTLTVVAIDATYTNHYDTKVVVLAPGQTVDVLLRTNQSVGSYYMAFTPYHSAPLVQINANMTRGVIIYEGATSAKPIMPDLPAQTDTPTAHKFYTNITGLAGGPHWVPVPRQVDEHMFITFGLSFDICRSDTGVCPGPVPLFSANMNNESFVLPHGKGVSMLEAFFRNDVTGVYTRDFPDQPAVVFDFTNPNITSSPDTPREFLIAPKSTKVKTLKFNSTVQIVLQNTAIIAAENHPIHLHGFNFHVLAQGFGNYNATRDEPKFNFVNPQIRNTIAVPVGGWSVIRFQANNPGVWLMHCHLETHLPWGLSTAFEVENGPSIRVPPPPADLPKC 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00659 1230 CDD CuRO_2_LCC_plant 255 402 IPR034285 -
Gma03g00659 1230 PANTHER LACCASE-7 670 1230 - -
Gma03g00659 1230 PANTHER LACCASE-7 106 669 - -
Gma03g00659 1230 Gene3D - 1037 1230 IPR008972 -
Gma03g00659 1230 Gene3D - 464 673 IPR008972 -
Gma03g00659 1230 CDD CuRO_3_LCC_plant 510 653 IPR034289 GO:0005507
Gma03g00659 1230 CDD CuRO_1_LCC_plant 687 803 IPR034288 GO:0005507
Gma03g00659 1230 Gene3D - 677 803 IPR008972 -
Gma03g00659 1230 Gene3D - 112 240 IPR008972 -
Gma03g00659 1230 CDD CuRO_3_LCC_plant 1070 1215 IPR034289 GO:0005507
Gma03g00659 1230 SUPERFAMILY Cupredoxins 441 671 IPR008972 -
Gma03g00659 1230 SUPERFAMILY Cupredoxins 811 1000 IPR008972 -
Gma03g00659 1230 ProSitePatterns Multicopper oxidases signature 1. 1190 1210 IPR033138 -
Gma03g00659 1230 Pfam Multicopper oxidase 254 404 IPR001117 -
Gma03g00659 1230 Pfam Multicopper oxidase 818 968 IPR001117 -
Gma03g00659 1230 Pfam Multicopper oxidase 691 804 IPR011707 GO:0005507
Gma03g00659 1230 Pfam Multicopper oxidase 128 241 IPR011707 GO:0005507
Gma03g00659 1230 CDD CuRO_2_LCC_plant 818 965 IPR034285 -
Gma03g00659 1230 SUPERFAMILY Cupredoxins 1003 1226 IPR008972 -
Gma03g00659 1230 SUPERFAMILY Cupredoxins 121 265 IPR008972 -
Gma03g00659 1230 SUPERFAMILY Cupredoxins 681 828 IPR008972 -
Gma03g00659 1230 SUPERFAMILY Cupredoxins 248 438 IPR008972 -
Gma03g00659 1230 ProSitePatterns Multicopper oxidases signature 1. 628 648 IPR033138 -
Gma03g00659 1230 Gene3D - 815 999 IPR008972 -
Gma03g00659 1230 Gene3D - 252 437 IPR008972 -
Gma03g00659 1230 PANTHER MULTI-COPPER OXIDASE 670 1230 IPR045087 -
Gma03g00659 1230 PANTHER MULTI-COPPER OXIDASE 106 669 IPR045087 -
Gma03g00659 1230 ProSitePatterns Multicopper oxidases signature 2. 633 644 IPR002355 GO:0005507
Gma03g00659 1230 TIGRFAM laccase: laccase 120 669 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gma03g00659 1230 TIGRFAM laccase: laccase 684 1230 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gma03g00659 1230 Pfam Multicopper oxidase 1075 1214 IPR011706 GO:0005507|GO:0016491
Gma03g00659 1230 Pfam Multicopper oxidase 515 652 IPR011706 GO:0005507|GO:0016491
Gma03g00659 1230 CDD CuRO_1_LCC_plant 124 240 IPR034288 GO:0005507
Gma03g00659 1230 ProSitePatterns Multicopper oxidases signature 2. 1195 1206 IPR002355 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00659 Gma-Chr3 20482752 20495339 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00659 K05909 K19791 gmx:100812879 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00659 03 20482752 20495339 Gma03g00659 03 20482752 20495339 ECH
Gma18g01781 18 49606342 49612418 Gma03g00659 03 20482752 20495339 PCT
Gma07g01310 07 17313187 17318307 Gma03g00659 03 20482752 20495339 PCT