Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01142 ATGCAAAGCCTAGACACTTGTGTTTTCATTCTTGCCTTTATTATTTCACCATATTTATGTCATAGTGTTGGTACCAACACAATTTATAATGTGATAAACTATGGTGCTAAGGGAGATGGCAGATCAGATGATTCACAAGCCTTTTTAAGAGCATGGCAAAGCACGTGTGGAGCACAAGGAGCAGCAACTCTACTTATACCACCAAACAGAGTATTCTTGGTGTCAAGCTTAATACTAAAGGGTCCTTGCTCCGCCGCAATTCAAATTCAGCTTCGAGGGAAAATAGTTGCACCTGCGAAAGATGCTTGGGTAGGAGGATATAAGTATACTTGGATTTTGATCTCAAACATAAACGGTCTTACAATTGAAGGAAATGGAGGATTACTTGATGGCGATGGTTCCACATGGTGGGCATGCAAAAATTGTCCACGACCAGCGGTCCTTTCTTTCCAATCATGCAATCGTCTTAGTGTTAGTTACTTGAACATCATTAATAGTCCAAGAGCTCACATAGGCATAAATCAATGTCAGGGAGCCATATTCTCTAATATTAATATTCATGCTCCTGGTAATAGTCCCAACACTGATGGAATTGATATTAATTCTTCCCAAAATATCATGATAAGAGATTCCTTTATAGCATCTGGTGATGATTGTATTGCCATCACTGGTAGCTCCTCTTACATCAATGTTACTGGGATTGATTGTGGACCAGGCCATGGAATAAGGAGTTTACCATCCCAAATTATGTACATTAGAAGTAGGGTCATGGTAAATGGTTATAGTCCATTTAGGGTGAGTGTCCCAATGCTCAACTTCATCGCATTCCTAAGGAAAATTGAGTGTGAGGCTTCCAAAGCTGGAAGTGTTATAAAATTTGAGGTGCTAAGCGTGCCAGGATGA 903 0.3998 MQSLDTCVFILAFIISPYLCHSVGTNTIYNVINYGAKGDGRSDDSQAFLRAWQSTCGAQGAATLLIPPNRVFLVSSLILKGPCSAAIQIQLRGKIVAPAKDAWVGGYKYTWILISNINGLTIEGNGGLLDGDGSTWWACKNCPRPAVLSFQSCNRLSVSYLNIINSPRAHIGINQCQGAIFSNINIHAPGNSPNTDGIDINSSQNIMIRDSFIASGDDCIAITGSSSYINVTGIDCGPGHGIRSLPSQIMYIRSRVMVNGYSPFRVSVPMLNFIAFLRKIECEASKAGSVIKFEVLSVPG 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01142 300 Gene3D - 20 259 IPR012334 -
Gma07g01142 300 SUPERFAMILY Pectin lyase-like 20 242 IPR011050 -
Gma07g01142 300 PANTHER - 1 242 - -
Gma07g01142 300 Pfam Glycosyl hydrolases family 28 56 242 IPR000743 GO:0004650|GO:0005975
Gma07g01142 300 PANTHER PECTIN LYASE SUPERFAMILY PROTEIN 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01142 Gma-Chr7 15065280 15072567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g01142 24 242 Glycoside Hydrolase AT5G17200 46.364 1.78e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01142 K01184 - gmx:100801217 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00898 03 31806138 31809950 Gma07g01142 07 15065280 15072567 GST