Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01120 ATGTCCACTCTGCTTCACTCCGCATCAACTTCTTCTCCTTCCTTCTCTCAGATCACCACTCCTCGTTTCGCCCCAATCACTCGTATCTCTCTCCGAAACGGCGTCCGGTGCAAGGCGATAGAAGCAGTGAATTTGGAGAATGGAAGGCCGAGCGCGAGCGAGTTCCTAGTCAGCGGAAGCGGAAACGCGATTCCGAGGTACGTCGTGGCGCCCAACACGCGTATTCAGGATTTGGTTAACCGAAACGACACTCGCCTCCGGATATTCTCCGGCACCGCCAATCCGGCGCTCGCTCAGGAAATTGCATGCTACCTGGGCCTGGAGCTAGGAAAAACTAAGATAAAGCGTTTTGCTGATGGTGAGATATATGTCCAGCTGCAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCAAATGAGAATCTTATGGAGCTTCTCATAATGATTGATGCCTGCAGGAGGGCTTCAGCCAAAAATATTACTGCTGTCATTCCGTATTTTGGATATGCCAGAGCTGATAGAAAGACTCAAGGACGTGAATCCATTGCTGCCAAGCTTGTCGCAAATTTAATTACAGAAGCAGGTGCAAATCGTGTACTTGCTTGTGACCTCCATTCTGGGCAGTCCATGGGCTATTTTGATATTCCAGTTGATCATGTGTATGGACAGTCTGTTATACTTGATTACCTTGCCAGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCACCAGATGTTGGTGGTGTTGCCAGAGCACGTGCTTTTGCTAAAAAATTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGCCATGGGCATAATGTTGCTGAGGTGATGAATTTGATTGGTGATGTAAGGGGAAAGGTAGCAGTTATGGTTGATGACATGATTGATACTGCTGGGACTATTGCCAAAGGTGCAGCTCTGTTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCACTACACATGCTGTTTTCAGTCCTCCTGCTATTGAGAGATTGTCAAGCGGTTTGTTCCAAGAAGTTATCATAACTAATACAATTCCAGTGGCAGAACAGAACTATTTCCCCCAATTAACTGTCCTGTCGGTGGCAAACCTTTTGGGCGAGACTGTTTGGCGTGTTCATGATGATTGCTCACTTATGACACTGTGGTAA 1188 0.4689 MSTLLHSASTSSPSFSQITTPRFAPITRISLRNGVRCKAIEAVNLENGRPSASEFLVSGSGNAIPRYVVAPNTRIQDLVNRNDTRLRIFSGTANPALAQEIACYLGLELGKTKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQSVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVAEQNYFPQLTVLSVANLLGETVWRVHDDCSLMTLW 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01120 395 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 86 202 IPR029099 -
Gma07g01120 395 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 210 225 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Gma07g01120 395 Gene3D - 229 372 IPR029057 -
Gma07g01120 395 Gene3D - 89 387 IPR029057 -
Gma07g01120 395 SMART Pribosyltran_N_2 86 202 - -
Gma07g01120 395 Pfam Phosphoribosyl synthetase-associated domain 287 394 IPR005946 GO:0000287|GO:0004749|GO:0009165
Gma07g01120 395 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 46 392 IPR005946 GO:0000287|GO:0004749|GO:0009165
Gma07g01120 395 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 86 395 IPR037515 GO:0004749
Gma07g01120 395 PANTHER RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 2, CHLOROPLASTIC 46 392 - -
Gma07g01120 395 TIGRFAM ribP_PPkin: ribose-phosphate diphosphokinase 87 394 IPR005946 GO:0000287|GO:0004749|GO:0009165
Gma07g01120 395 CDD PRTases_typeI 245 357 IPR000836 -
Gma07g01120 395 SUPERFAMILY PRTase-like 151 387 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01120 Gma-Chr7 14633796 14647475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01120 K00948 - gmx:100789585 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00928 03 32287767 32295963 Gma07g01120 07 14633796 14647475 GST