Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00928 ATGTCCACTCTGCTTCACTCCGCTCCCACTTCTTCTCCTTCCTTCTCTCGGATCACCACTCCTCGTTTCGCTTTCGCTCCAATCACTGGCATCTCTCTCCGAAACGGCGTCCGTAGCAAGGCGATCGAAGCAGTGAAGTTGGAGAATGGAAGGCCGAGCGCGAGCGAGTTCGTAGTCAGCGGAAGCGGAAACGCAATTCCGAGTTACGTCGTGGCGCCAAACGCGCGTGTTCAGGATTTGGTTAACCGAAACGACACTCGCCTCCGGATATTCTCCGGCACTGCCAATCCGGCTCTTGCTCAGGAAATTGCATGCTACCTGGGCCTGGAGCTAGGAAAAATTAAGATAAAGCGTTTTGCTGATGGTGAGATATATGTCCAGCTGCAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCAAATGAGAATCTTATGGAGCTTCTCATAATGATTGATGCCTGCAGGAGGGCTTCAGCCAAAAATATTACTGCTGTCATTCCATATTTTGGATATGCCAGAGCTGATAGAAAGACCCAAGGACGTGAATCCATTGCTGCCAAGCTTGTAGCAAATTTAATTACAGAAGCAGGTGCAAATCGTGTACTTGCTTGTGACCTCCATTCTGGGCAGTCCATGGGCTATTTTGATATTCCAGTTGATCATGTGTATGGCCAGCCTGTTATACTTGATTACCTTGCCAGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCGCCAGATGTTGGTGGTGTTGCCAGAGCACGTGCTTTTGCCAAAAAATTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGCCATGGGCATAATGTTGCTGAGGTGATGAATTTGATTGGTGATGTAAGGGGAAAGGTAGCAGTTATGGTTGATGACATGATTGATACTGCTGGGACTATTGCCAAAGGTGCAGCTCTGTTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCACTACACATGCTGTTTTCAGTCCTCCTGCTATTGAGAGGTTGTCAAGTGGTTTGTTCCAAGAAGTTATCATAACTAATACAATTCCAGTGGCAGAACAGAACTATTTCCCTCAATTAACTGTCTTGTCGGTGGCAAACCTTCTGGGCGAGACTGTTTGGCGTGTTCATGATGATTGCTCAGGTGGAATTGAACCTTATTCAAGTTTGGGCATTGATTGA 1215 0.4683 MSTLLHSAPTSSPSFSRITTPRFAFAPITGISLRNGVRSKAIEAVKLENGRPSASEFVVSGSGNAIPSYVVAPNARVQDLVNRNDTRLRIFSGTANPALAQEIACYLGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVAEQNYFPQLTVLSVANLLGETVWRVHDDCSGGIEPYSSLGID 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00928 404 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE-RELATED 53 403 - -
Gma03g00928 404 Pfam Phosphoribosyl synthetase-associated domain 289 392 IPR005946 GO:0000287|GO:0004749|GO:0009165
Gma03g00928 404 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 53 403 IPR005946 GO:0000287|GO:0004749|GO:0009165
Gma03g00928 404 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 88 398 IPR037515 GO:0004749
Gma03g00928 404 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 212 227 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Gma03g00928 404 SUPERFAMILY PRTase-like 153 389 IPR029057 -
Gma03g00928 404 SMART Pribosyltran_N_2 88 204 - -
Gma03g00928 404 Gene3D - 231 374 IPR029057 -
Gma03g00928 404 CDD PRTases_typeI 247 359 IPR000836 -
Gma03g00928 404 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 88 204 IPR029099 -
Gma03g00928 404 TIGRFAM ribP_PPkin: ribose-phosphate diphosphokinase 89 391 IPR005946 GO:0000287|GO:0004749|GO:0009165
Gma03g00928 404 Gene3D - 91 389 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00928 Gma-Chr3 32287767 32295963 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00928 K00948 - gmx:100816430 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00928 03 32287767 32295963 Gma07g01120 07 14633796 14647475 GST