Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00990 ATGGGCAAAATCCCTCCTTCGTTCCGCTCCGCAATCGCAAACCCTAACCTCCGTAACCCCTCTTCACTCTTCCGTCCCCAACCCCATCACTTCCCAAACAAACACCAACAACCTCGAAAACCCTCTAAGCAACAACAAAAACCTTCTTCTCTTCCTCTCTTCAAATCCCCAAACCTCGAAGACGCCAAAAAACTCTTCAACTCCATCGCCAACTCTTCCTCCGACCCCCGCTTCCCCAACTCCCTCCTCCACTCCTACGCCAAACTCGCCACCACCCCTTCCGATTCCATCAAATTCTTCAACCATATCACCAAAACCCTACCTTCCTTCTCCCCCGACCGCTCCACCTTCCACATCCTCCTGTCCCACGCCTCCAACAATTCCAATTTACTCTCCCCAATCCACCAAACCCTAAATTTAATGCTGGCCGCCGGGATCACCCCCGACACTGCCACCGCCGACGTCGCCGTCCGGTCCCTCTGCTCGGCCGGTCGCCTCGACCACGCCGTCGAATTGATCAAAGAATTCGCCTCCAAACACTGCCCCCCGGACACCTACACCTTCAACTTCCTCGTCAAGCACCTCTGCAAGTCCAGCACCATAACCACCGTCTATGCCTTCATCGACGAAATGCGCGAAAAATTCGACGTCAAGCCTGATCTGGTCACCTACACGATCCTCATTGACAATGTATGCAATGGGAAGAACCTGAACCTGAGGGAGGCGATGAGGCTGGTGAGTGTGCTTCACGAGGAAGGGTTTAAGCTTGATTGCTTTGTTTACAACACCATTATGAAAGGGTATTGTGTGTTGAGTAGAGGGAGTGAGGCGATTGAGGTTTATAACAAGATGAAGGAGGAAGGGGTGGAGCCTGATCTTGTTACTTACAACACTTTGATCTTCGGGCTGTCGAAGTCCGGGAGGGTGACCGAGGCGAGGAAGTTGCTGCGTGTGATGGCGGAGAAAGGCTATTTTCCTGATGAGGTGACCTATACTTCACTGATGAATGGGTTGTGTAGGAAGGGGGACGCGCTAGGGGCCCTGGCCTTGTTGGGGGAGATGGAGGCCAAGGGGTGTAGTCCGAATGCGTGCACGTATAACACGCTGCTGCACGGGTTGTGTAAGGCGAGGCTGGTGGAGAAGGCTGTCAAGTTCTACCAGGTGATCAGGGCTGGCGGTCTGAAGCTTGATACAGCTTCTTATGGGACTTTTGTCAGGGCGCTGTGTAGGGACGGGAGAATTGCAGAGGCGTATGAGGTTTTTGATTATGCTGTTGAGAGCAAGAGCTTGACGGATGTTGCTGCTTACTCGACATTGGAGAGCACGCTTAAATGGCTCAGGAAGGCGAAAGAACAAGGGCTCGCCATTTGA 1371 0.5303 MGKIPPSFRSAIANPNLRNPSSLFRPQPHHFPNKHQQPRKPSKQQQKPSSLPLFKSPNLEDAKKLFNSIANSSSDPRFPNSLLHSYAKLATTPSDSIKFFNHITKTLPSFSPDRSTFHILLSHASNNSNLLSPIHQTLNLMLAAGITPDTATADVAVRSLCSAGRLDHAVELIKEFASKHCPPDTYTFNFLVKHLCKSSTITTVYAFIDEMREKFDVKPDLVTYTILIDNVCNGKNLNLREAMRLVSVLHEEGFKLDCFVYNTIMKGYCVLSRGSEAIEVYNKMKEEGVEPDLVTYNTLIFGLSKSGRVTEARKLLRVMAEKGYFPDEVTYTSLMNGLCRKGDALGALALLGEMEAKGCSPNACTYNTLLHGLCKARLVEKAVKFYQVIRAGGLKLDTASYGTFVRALCRDGRIAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLRKAKEQGLAI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00990 456 Pfam PPR repeat 393 423 IPR002885 -
Gma07g00990 456 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 220 256 IPR002885 -
Gma07g00990 456 SUPERFAMILY HCP-like 259 426 - -
Gma07g00990 456 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 1 455 - -
Gma07g00990 456 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 455 - -
Gma07g00990 456 MobiDBLite consensus disorder prediction 1 55 - -
Gma07g00990 456 Gene3D Tetratricopeptide repeat domain 319 455 IPR011990 GO:0005515
Gma07g00990 456 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 397 431 IPR002885 -
Gma07g00990 456 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 149 183 IPR002885 -
Gma07g00990 456 Gene3D Tetratricopeptide repeat domain 80 201 IPR011990 GO:0005515
Gma07g00990 456 TIGRFAM PPR: pentatricopeptide repeat domain 364 397 IPR002885 -
Gma07g00990 456 TIGRFAM PPR: pentatricopeptide repeat domain 329 363 IPR002885 -
Gma07g00990 456 TIGRFAM PPR: pentatricopeptide repeat domain 294 328 IPR002885 -
Gma07g00990 456 TIGRFAM PPR: pentatricopeptide repeat domain 400 428 IPR002885 -
Gma07g00990 456 TIGRFAM PPR: pentatricopeptide repeat domain 157 185 IPR002885 -
Gma07g00990 456 TIGRFAM PPR: pentatricopeptide repeat domain 260 292 IPR002885 -
Gma07g00990 456 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 257 291 IPR002885 -
Gma07g00990 456 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 362 396 IPR002885 -
Gma07g00990 456 Pfam PPR repeat family 148 197 IPR002885 -
Gma07g00990 456 Pfam PPR repeat family 326 375 IPR002885 -
Gma07g00990 456 Pfam PPR repeat family 258 305 IPR002885 -
Gma07g00990 456 Gene3D Tetratricopeptide repeat domain 202 318 IPR011990 GO:0005515
Gma07g00990 456 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 327 361 IPR002885 -
Gma07g00990 456 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 292 326 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00990 Gma-Chr7 11062403 11064993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00990 239 453 Glycosyltransferase AT1G05670 33.182 1.34e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00990 - - gmx:100782321 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01112 03 36195530 36196174 Gma07g00990 07 11062403 11064993 GST