LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma07g00987	ATGACACTTCTTCATTCCTTGCCCACCATGGCCAACTTCTCTTCCAACCAGATTCGCTTTCTCCTCAGCACCTTGAACGAAGTCAACTTTGACTCCATTTTCCATCAACTCTCTCAGTTTGCGGAATTTGGAACTACTGGGTGCATTTTGCTGCTTCAAACTTGCTTGGATCACTATGGCTATGCCAGAAGAGATATGAAAGACATCCAGCATGAGCCAATTCTTGGGGCAGTCATTAAGTACCTCTTGGACAAACCAAACTTCAGCACAGTGTTTTCTGAGTCGATGAAGAATATAGAAATTAATGAAAGTTTTTTAGAAAGTTTTTGCAATGGATTGCCGTTATCTTTATTGGAAAAAATTATCATCAGTCTTGCTTTATCTGATTCTGAGAATCCCGATGTCAGGCTGTGTGGCAAATTTTTTTGCATGGCTCGGATTGAGGAATTGTGTGCCAACCCTGGTTCTCTGAGTTTCCATGAGCAAATGCACAATGTTATCATGTTCCTAAAGCAGTCTGAGGGTTTTTCCAAGCATGTGGATTCCTTTATGCAGATATTGTCACTTGTGCAGTTCAAAGACACGCCACCTTTTGTCTTGACTCCATTGCTTCCTGATGAGATGCATGAGGCTGATTTTTTAAGGAATATGGAGTTGTTCCATGACAGTGGAGAAAATGATTTTGATGCTATTTTGGCAGACATACAGAAGGAAATGAACATGGGTGATATCGTGAAGGAACTAGGCTATGGATGCACGGTTGATGTCTCACAGTGCAAGGAAATATTTTCACTCTTTTTACCTTTAACTGAAAATACACTCTCTAAATTACTTGGTGCAATTGCTTGCACCCGTACTGGGCTGGAGGACAGCCAAAACACATACTTAACTTTTCGTGCAGCCCATGGATACAATGTGTCTGAGTTGCCACCACTGAACTCTTGGAATATTGATGTCTTGATTGATACACTTATGCATCTTGCACCTCATACTAATTGGGTACGCGTTATTGAAAGCCTTGATCATGAAGGGTTTTTTCTTCCTAGTGAAGAAGCGTTCTCTTTTCTCATGTCTGTATATAAACATGCCTGTAAGGAACCATTTCCTCTCCATGCCATCTGTGGGTCCATCTGGAAGAATACTGAGGGTCAGCTGTCTTTCCTTAAATATGCTGTATCAGCACCACCGGAAATTTTTACCTTTGCACACTCGGGAAGGCAGCTGGCATATGTTGATGCAATTAATGGCCACAAGCTTCAAAATGGACATGCAAATCATGCATGGCTGTGTCTTGATCTTTTAGATGTCCTCTGCCAGCTAGCTGAGAAGGGTCATGCCAGTATTGTTCGATTAATCTTTGATTATCCCCTTAAACACTGTCCTGAAGTCTTGCTTCTTGGGCTGGCACATATTAATACTGCCTACAACCTCTTGCAGCAGGAAGTATCTCTGATTGTTTTTCCCATGATTTTAAAAAGTGCTGTAGGCAGTGGGATGATTCTTCACCTTTGGCATGTTAATCCCAATCTGGTATTGAGAGGGTTTATTGATTCTCAAAACAATGATGCAGACAGTATTGTAAGAATTGTTGAAATCTGCCAGGAGCTAAAGATTCTATCATCTGTGGTGGAAATTATTCCCTATTATTATAGTATAAGGTTAGCAGCTGTTGCATCAAGAAAAGAATTTCTTGACCTTGAGAAGTGGTTGAGTAGCAACTTAACTACATACAAGGAAGCCTTTTTTGAGGAGTGCCTCAAGTTCTTAAAGGATACCCATTTTGGTGGATCGCAGAACCTTTCTGGCAAATCATTTCATCAGTCTGGTGCTGTTCTGAGTCTATATGCCGAGGCAACTGCTACCATCTTGAAGGTTCTTAAATCTCATACTGACTTGGTTGCTTCTAGACAACTTTCTGAGGAGTTGGAGAGGCTTCATATATCTATGATAGATACAAATCCAAGGCTTCAGAATGGTGGGACAGCTGATTCATCTACTTCTGATGGATATGCGGATGACATTGAAGCTGAAGCAAACTCTTACTTCCATCAAATGTTTTCTGATCAGTTAACCATTAATGCAATGGTACAGATGCTTACACGATTCAAGGAATCTTCAGTGAAGAGGGAGAAATCAATTTTTGAATGCATGATTGCAAACTTGTTTGAGGAGTATAGATTTTTCCCAAAGTATCCTGAAAGACAACTCAAAATTGCTGCAGTTCTCTTTGGTTCTGTGATCAAGCATCAGCTTGTAACTCATCTATCTTTGGGGATTGCTCTTCGTTATGTTCTTGATGCATTGCGCAAGCCTGCAGATTCTAAAATGTTTTTGTTTGGAAGTCTGGCATTGGAGCAGTTTGTGGATCGTCTTATTGAGTGGCCTCAGTATTGCAATCATATTCTTCAAATTTCCCATTTGCGCAGTACACATTCAGAAATAGTTGCTTTCATTGAGCAGGCTCTTGCCAGGATTTCCTCTGGTCATTCAGATGTTGATGGGGCGAGTCATGCTTCTGTTATTAGTAACCATCATTCTGCACAGGCTTCATTAGGGCATGTAGAGCTCAGTGGCTCTAGCGTCATACAACCTGGGCAACAACATTTGTCAATGCAGCTTCAACAACGACGTGAAAATCCGTTGGATGATCGTCTCAAAGCTTCTGTTGGTTCATCTACGGATGTAAAACCATTGTTATCTTCTCTAGGGCAATCTTCAGTACTAACACCTACTGATGCTTCTAGTACCAATAAGTTACATAGCACAGTCAGCACGTCATCAATGCTATCTTCGTCTTCTCCTGGTTTTGTTCGTCCTTCCCGTGGAACTACTTCTGCCAGGTTTGGATCTGCCTTGAACATTGAAACTTTGGTTGCTGCTGCTGAGAAAAGAGAAATTCCTATTGAGGCTCCAGGGTCAGAGGTTCAGGACAAGATATTATTTATAATTAATAATGTTTCTGCTGCTAATATTGAAGCTAAAGCAAAAGAGTTCACTGAAATTTTGAAAGAGCAGTACTATCCTTGGTTTGCACAGTATATGGTTATGAAAAGAGCGAGCATTGAGCCAAATTTCCATGACTTGTACCTGAAATTCCTGGATAAAGTTAATTCAAAGGCTTTGAACAAAGAGATTGTCCAGGCAACTTATGAAAATTGCAAGGTTCTTTTAGGATCTGAGCTCATAAAATCAAGTTCAGAGGAACGTTCTTTGCTTAAAAATTTGGGGAGCTGGCTTGGAAAGTTAACAATTGGCCGGAATCAGGTTTTGAGAGCTCGTGAAATAGACCCAAAGTCTTTGATTATGGAGGCATATGAGAAGGGGCTAATGATTGCTGTTATTCCATTTACGTCAAAGGTCCTTGAACCATGCCAAAGCAGTCTTGCATATCAACCTCCTAATCCTTGGACTATGGGCATTTTGGGATTGCTTGCTGAGATTTATTCAATGCCAAACTTGAAAATGAACCTCAAATTTGACATAGAGGTTTTATTCAAAAATCTGTGTGTTGATATGAAGGATGTCACACCAACTTCTCTCCTGAAGGATAGAAAAAGAGAAATTGAAGGAAATCCTGATTTCTCTAATAAAGATGTTGGGGCATCTCAATCACAAATAATTACTGATATAAAATCTGGCCTTGTACCTCCGGTAAATCAAGTGGAATTACCACTTGAAGTCACCAATCCATCCAACACAGGGGCTCATCCACATATACTGTCTCAGTATGGTGGTCCTCTTCATATTTCCTCGGGAGCATTGATGGAAGATGAAAAGGTTACACCTCTGGGATTGTCTGATCAACTTCCCTCTGCTCAAGGACTGTTACAAGCAAATCCTGCCCCAGCACCTTTTTCTATTAGCCAGCTTCCAACACAGATACCTAATATTGGGACTCACGTTATTATCAATCAAAAGCTCAGTGGTTTTGGGCTGCAAATGCATTTTCAGAGAGCGGTACCCATTGCAATGGACAGAGCTATCAAAGAGATAGTGTCTAGTATTGTGCAGCGTAGTGTTTCCATAGCAACACAAACAACCAAGGAGCTTGTTTTAAAGGACTATGCCATGGAATCTGATGAGACACGCATATTAAATGCGGCACACTTGATGGTTGCTAGTCTGGCTGGAAGTTTGGCTCATGTTACGTGCAAAGAACCATTACGGGCATCAATATCTGGTCAACTGAGGACTTCACTTCAGAACTTAAATATTGCTAATGAAATTTTGGAACAAGCTGTGCAACTTGTCACCAATGATAATCTTGATCTAGGCTGTGCAGTCATTGAACAGGCTGCTACTGACAAGGCAATAAACACCATCGATACAGAGATTGGTCAACAACTCTCTTTGAGAAGGAAGCATCGAGAAGGTATGGGTTCTACATTTTTTGATGCAAATTTGTATCCACAAGGTTCTATGGGTGGTGTTCCAGAGCCTCTTCGCCCCAAGCCTGGTCAGTTGTCTCTCTCACAACAACGTGTCTATGAGGACTTCGTTCGGCTTCCCTGGCAAAACCAGTCTAGCCAGAGCTCACATTCTATGTCTGCTGGTGTCGCTGTTCAATCTGGCAATACTGGTCTTACTGGCACTAATGGTTCTGTATCAGGGCAGATTAACCCTGGATACCCTGTGACCACAGGGTATGAAGGAGTATCTAGACCATTAGATGATATGACAGAATCTAATTTGGCTCCACATTTTAGTGCTTCCTCGATTAACATTAGAGCAGCTGATAGTGTTTCCCAGCACAGTATGGAGAAAGACTCTGTTGCCTCATTTCCTTCGGCTGCTTCCACCCCTGAATTGCATGCAGTGGATTCTTCTGAAGTGAAAGAATCTGGAACTTCTCCACAGCCACTAGTTACATCAGGTGCTGTGGAGCGCCTTGGAAGTAGTTTTTTGGAGCCTTCTCTCACAACAAGAGATGCCCTAGATAAATTCCAAATTGTTGCGCAAAAGTTGGAAGCTATGGTCAGCAATGATTCCAGGGATGGAGAAATACAGGGTGTCATTTCTGAGGTTCCTGAGATCATACTTAGATGTGTTAGTCGAGATGAGGCAGCTTTAGCTGTGGCTCAAAAGGTTTTCAGGGGTTTGTATGATAATGCATCAAACAATATTCATGTCTCTGCTCATCTTGCTATCCTGACTGCCATTCGTGATGTTTGCAAGCTTGCTGTCAAGGAGCTTACTAGTTGGGTAATTTACTCGGAAGAAGAAAGGAAATATAACAAAGAAATTACTGTTGGCCTCATCCGTAGTGAATTGCTAAATCTTACTGAGTACAATGTTCATATGGCCAAACTTATTGATGGAGGAAGGAACAAGGCTGCAACCGAATTTTCCATTTCCCTTCTTCAAACCCTGGTTGTCGAGGAACCTAAAGTTATTTCAGAACTTCACAATCTTGTTGATGCTTTGGCAAAGCTTGCTACAAAGCCTGGATGCCCTGAGTCATTACCACAGCTTCTTGACATGATCAAGAATCCTGGTGCTCTATCTTCTAGTAATGCTGGAAAGGAGGATAAGGCAAGACAATCAAGAGACAATAAGGGTTCTGGTCTGTTACCTGCAAACAGGGAAGAGTTCAACAGCGTCGATTCTATTGAACCAGATCCTGCTGGGTTCCGGGAGCAGGTTTCCATGTTGTTTACAGAATGGTATAGGATATGTGAACTTCCTGGTGGCTATGATACAGCTTCTACCCACTTTACATTACAATTGCATCAGAATGGGCTGCTTAAGGGGGATGATCTTACAGATCGCTTTTTCCGACTATTGATGGAACTAGCTGTTGCACATTGCTTATCCACTGAGATGATTAATTCTGGGTCACTACAGTCTCAACCGCTGCAGACAATGTCATTTCTTGCAATTGAAATTTATGCAAAGCTTGTCTTCTCAATCTTGAAGGGATCAAACAAACTCTTTCTTCTTTCCAAGATTCTGGCAGTTACTGTCAGATTCATTATAAAAGATGCAGAGGAGAAGAAGGCCTCTTTTAATCCAAGGCCACTTTTCAGATTATTCATCAACTGGCTTCTAGATCTTGGTTCACTTGAGCCTGTTACTGATGGTGCAAATCTTCAGATTTTAACTGCTTTTGCCAATGCATTTCATGCTTTGCAGCCCCTCAAAGTTCCTGCATTCAGTTTTGCATGGCTTGAGTTGATTAGTCACAGGAGCTTCATGCCTAAAATGTTGACTGGTAATGGTCAAAAAGGTTGGCCTTATATCCAAAGGTTGCTTGTAGATCTGTTCCAATTTATGGAGCCTTTTCTGAGGCATGCTGAACTTGGAGAACCGGTTCGTGTCCTCTATAAAGGAACACTTAGGGTGCTCTTAGTGCTACTTCATGACTTCCCTGAGTTTCTATGTGACTATCACTTTACCTTTTGTGATGTTATTCCTCCAAGTTGCATACAGATGAGGAATATCATTCTAAGTGCATTTCCACGTAGTATGAGGCTGCCAGATCCATCTACTCCTAATCTGAAGATTGATTTGCTTCAAGAAATAACCCAATCGCCTCGCATTCTTTCGGAGGTTGATGCAGCACTCAAAGCAAAGCAGATGAAGGTTGATGTAGATGAATACCTTAAGACAAGGCAACAGAGTTCGCCGTTTTTATCTGAACTGAAGGATAAGCTGCTTCTCTCACCCAATGAAGCAGCTTCTGCTGGGACTCGATATAATGTGCCGTTAATTAACTCACTTGTGCTATATGTTGGAATGCAGGCAATCCATCAGCTTCAGGGACGAACTCCCCATACTCAAACATCAGCAAATGCTTTCCCCTTAGCCGTATTTTCTGTTGGTGCTGCATTGGATATTTTCCAGACCCTAATTGTGGACTTGGATACTGAAGGGCGCTACCTTTTCCTAAATGCTATTGCCAACCAACTGCGTTATCCTAATACTAATACACACTACTTTTCCTTCATCCTTCTGTACTTGTTTGCTGAATCAAACCAGGAAGTTATCCAAGAACAAATTACTAGAGTCTTGTTAGAACGCCTAATTGTTAACCGTCCTCATCCCTGGGGTCTCCTCATTACTTTTATTGAGCTGATCAAGAATCCTAGGTACAATTTCTGGAACCGGAGTTTCATAAGATGTGCACCGGAGATTGAAAAACTTTTTGAATCAGTGTCAAGATCTTGTGGAGGCCCAAAACCAGTGGATGATAGCATGGTTTCGGGTTGGGTCTGA	7215	0.4159	MTLLHSLPTMANFSSNQIRFLLSTLNEVNFDSIFHQLSQFAEFGTTGCILLLQTCLDHYGYARRDMKDIQHEPILGAVIKYLLDKPNFSTVFSESMKNIEINESFLESFCNGLPLSLLEKIIISLALSDSENPDVRLCGKFFCMARIEELCANPGSLSFHEQMHNVIMFLKQSEGFSKHVDSFMQILSLVQFKDTPPFVLTPLLPDEMHEADFLRNMELFHDSGENDFDAILADIQKEMNMGDIVKELGYGCTVDVSQCKEIFSLFLPLTENTLSKLLGAIACTRTGLEDSQNTYLTFRAAHGYNVSELPPLNSWNIDVLIDTLMHLAPHTNWVRVIESLDHEGFFLPSEEAFSFLMSVYKHACKEPFPLHAICGSIWKNTEGQLSFLKYAVSAPPEIFTFAHSGRQLAYVDAINGHKLQNGHANHAWLCLDLLDVLCQLAEKGHASIVRLIFDYPLKHCPEVLLLGLAHINTAYNLLQQEVSLIVFPMILKSAVGSGMILHLWHVNPNLVLRGFIDSQNNDADSIVRIVEICQELKILSSVVEIIPYYYSIRLAAVASRKEFLDLEKWLSSNLTTYKEAFFEECLKFLKDTHFGGSQNLSGKSFHQSGAVLSLYAEATATILKVLKSHTDLVASRQLSEELERLHISMIDTNPRLQNGGTADSSTSDGYADDIEAEANSYFHQMFSDQLTINAMVQMLTRFKESSVKREKSIFECMIANLFEEYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFLFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARISSGHSDVDGASHASVISNHHSAQASLGHVELSGSSVIQPGQQHLSMQLQQRRENPLDDRLKASVGSSTDVKPLLSSLGQSSVLTPTDASSTNKLHSTVSTSSMLSSSSPGFVRPSRGTTSARFGSALNIETLVAAAEKREIPIEAPGSEVQDKILFIINNVSAANIEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLCVDMKDVTPTSLLKDRKREIEGNPDFSNKDVGASQSQIITDIKSGLVPPVNQVELPLEVTNPSNTGAHPHILSQYGGPLHISSGALMEDEKVTPLGLSDQLPSAQGLLQANPAPAPFSISQLPTQIPNIGTHVIINQKLSGFGLQMHFQRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYAMESDETRILNAAHLMVASLAGSLAHVTCKEPLRASISGQLRTSLQNLNIANEILEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTEIGQQLSLRRKHREGMGSTFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSAGVAVQSGNTGLTGTNGSVSGQINPGYPVTTGYEGVSRPLDDMTESNLAPHFSASSINIRAADSVSQHSMEKDSVASFPSAASTPELHAVDSSEVKESGTSPQPLVTSGAVERLGSSFLEPSLTTRDALDKFQIVAQKLEAMVSNDSRDGEIQGVISEVPEIILRCVSRDEAALAVAQKVFRGLYDNASNNIHVSAHLAILTAIRDVCKLAVKELTSWVIYSEEERKYNKEITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVVEEPKVISELHNLVDALAKLATKPGCPESLPQLLDMIKNPGALSSSNAGKEDKARQSRDNKGSGLLPANREEFNSVDSIEPDPAGFREQVSMLFTEWYRICELPGGYDTASTHFTLQLHQNGLLKGDDLTDRFFRLLMELAVAHCLSTEMINSGSLQSQPLQTMSFLAIEIYAKLVFSILKGSNKLFLLSKILAVTVRFIIKDAEEKKASFNPRPLFRLFINWLLDLGSLEPVTDGANLQILTAFANAFHALQPLKVPAFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGEPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKVDVDEYLKTRQQSSPFLSELKDKLLLSPNEAASAGTRYNVPLINSLVLYVGMQAIHQLQGRTPHTQTSANAFPLAVFSVGAALDIFQTLIVDLDTEGRYLFLNAIANQLRYPNTNTHYFSFILLYLFAESNQEVIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDDSMVSGWV	2404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma07g00987	2404	Gene3D	-	2159	2390	-	-
	Gma07g00987	2404	MobiDBLite	consensus disorder prediction	1580	1623	-	-
	Gma07g00987	2404	MobiDBLite	consensus disorder prediction	1832	1862	-	-
	Gma07g00987	2404	Pfam	CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819	1314	1456	IPR024557	-
	Gma07g00987	2404	Pfam	CCR4-NOT transcription complex subunit 1 HEAT repeat	481	627	IPR032194	-
	Gma07g00987	2404	Pfam	CCR4-Not complex component, Not1	2016	2385	IPR007196	-
	Gma07g00987	2404	Pfam	CCR4-NOT transcription complex subunit 1 CAF1-binding domain	968	1188	IPR032191	-
	Gma07g00987	2404	PANTHER	CCR4-NOT TRANSCRIPTION COMPLEX	16	2403	IPR040398	GO:0017148\|GO:0030015
	Gma07g00987	2404	Coils	Coil	1400	1420	-	-
	Gma07g00987	2404	MobiDBLite	consensus disorder prediction	1580	1597	-	-
	Gma07g00987	2404	Gene3D	-	1866	2158	-	-
	Gma07g00987	2404	PANTHER	BNACNNG58980D PROTEIN	16	2403	-	-
	Gma07g00987	2404	Pfam	CCR4-NOT transcription complex subunit 1 TTP binding domain	655	824	IPR032193	-
	Gma07g00987	2404	Gene3D	-	940	1190	-	-
	Gma07g00987	2404	MobiDBLite	consensus disorder prediction	906	942	-	-
	Gma07g00987	2404	Gene3D	-	660	827	IPR038535	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma07g00987	Gma-Chr7	11004740	11024719	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma07g00987	K12604		-	gmx:100783935	4682.09

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma07g00987	07	11004740	11024719	Gma07g00987	07	11004740	11024719	ECH
	Gma07g00987	07	11004740	11024719	Gma03g01115	03	36243658	36258675	ECH
	Gma03g01115	03	36243658	36258675	Gma07g00987	07	11004740	11024719	GST