Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00983 ATGAGGGCAAAGCAAAATTTTTTATGGTGTGTGTGGATTTTGCTTTGTGGGTCTTGTGTGGGGAGGTTTGTTGTGGAGAAGAACAATTTGAAAATCACTTCTCCAAAATCATTGAGGGGTATATATGAATGTGCCATTGGGAATTTTGGGGTCCCCAAGTATGGTGGAACCATGATTGGTTCTGTGGTGTACCCCAAGTCCAATCAGAATGGATGTAGAAACTTTGATGCCTCGTTGAGTTCCAAGCCAGGAACATTCCCCACCTTTGTTCTTGTTGATCGGGGAGATTGCTACTTCACTTTAAAGGCGTGGAATGCACAGAAAGGTGGAGCTGCAGCTATTCTTGTTGCAGATAACAGGGAAGAACCATTGATCACCATGGACACTCCTGAAGAAGGGAATGGTGCTAAAGATGATGATTATATTGAGAAGATCAGCATTCCTTCTGCCCTTATCAGCAAATCACTAGGGGATAAAATCAAGCAGGCTCTCTCTAGCGGGGCTATGGTTAATGTAAATCTTGATTGGAGAGAGGCTCTTCCACATCCTGATGAGAGAGTTGAGTATGAGTTTTGGACAAGTAGCAATGATGAGTGTGGACCAAAGTGTGAAAGTGAAATTAACTTTGTCAAGAGCTTTAAAGGTGCAGCTCAGTTACTTGAGCAGAAAGGGTTTACAAAGTTCACCCCTCACTATATAACTTGGTATTGCCCAGAAGCATTTATATTAAGCCAACAGTGCAAGTCCCAGTGCATAAATAATGGGAGGTACTGTGCACCAGATCCTGAATTACATTTCCAAAGAGGGTACAATGGTAGAGATGTTGTTATCCAAAACTTACGTCAAGCATGCTTCTTTAAAGTGGCAAATGAAAGTGGAAAGCCTTGGCAATGGTGGGACTACGTGACTGACTTTTCAATCCGCTGCCCAATGAGAGAGAATAAGTACACTGAAGAATGCTCAGATCAAGTTATTAAATCTCTTGGTGTTGATTTGAAGGAAATTAAAGATTGTGTTGGAAATCCTAGTGCAAATGCCGACAACCCTGTTCTTAATGCTGAACAGGATGCACAGATTGGCAACAACGATCGTGGGGATGTTACTATACTACCTACTCTTATTATAAACAGCAGACAATATAGAGGTAAGCTGTCAAAAGCAGCAGTACTCAAGGCAATCTGTTCAGGTTTCCAAGAGACCACTGAGCCATCAATTTGTTTAACTCCAGACATGGAAACAAATGAGTGCTTGCAAAACAATGGTGGTTGTTGGCAGGACAAAGCTGCTAACATTACTGCATGCAGGGACACTTTCAGAGGAAGAGTATGTGAATGCCCTATTATACAAAATGTGCAGTTTGTTGGGGATGGATACACCCACTGTGAAGCTACAGGCGCCTTGAGGTGTGCAATCAACAATGGAGGTTGTTGGAAGGAAACCCAAGGAAGCAGGTCCTACTCTGCTTGTATTGATGACCACACAAAAGGTTGCAAGTGTCCACCTGGATTCAGGGGTGATGGTGTCCACTCCTGTGAAGATGTGGATGAGTGCAAAGAGAAATTGGTGTGCCAGTGCCCAGAGTGCCAATGCAAAAATACCTGGGGAAGTTATGAATGCACGTGTAGTGATGATTTGTTCTACACGCGAGAAAATGACATGTGTATTGGTAAATATGCTGCTTCAGTGGCTGGTGGGGGCATTGTTTGGATGGTTATTCTGGTCTTGGGTATTGCTGGTACCAGTGGATATGCATTTTACAAGTACAGAATCCAGAGATATATGGACTCTGAGATAAGGGCAATTATGGCCCAATACATGCCCTTGGATAATCAACCGGAGATTTCTAGTCAAGCTCATGAAGATGTCTAG 1869 0.4302 MRAKQNFLWCVWILLCGSCVGRFVVEKNNLKITSPKSLRGIYECAIGNFGVPKYGGTMIGSVVYPKSNQNGCRNFDASLSSKPGTFPTFVLVDRGDCYFTLKAWNAQKGGAAAILVADNREEPLITMDTPEEGNGAKDDDYIEKISIPSALISKSLGDKIKQALSSGAMVNVNLDWREALPHPDERVEYEFWTSSNDECGPKCESEINFVKSFKGAAQLLEQKGFTKFTPHYITWYCPEAFILSQQCKSQCINNGRYCAPDPELHFQRGYNGRDVVIQNLRQACFFKVANESGKPWQWWDYVTDFSIRCPMRENKYTEECSDQVIKSLGVDLKEIKDCVGNPSANADNPVLNAEQDAQIGNNDRGDVTILPTLIINSRQYRGKLSKAAVLKAICSGFQETTEPSICLTPDMETNECLQNNGGCWQDKAANITACRDTFRGRVCECPIIQNVQFVGDGYTHCEATGALRCAINNGGCWKETQGSRSYSACIDDHTKGCKCPPGFRGDGVHSCEDVDECKEKLVCQCPECQCKNTWGSYECTCSDDLFYTRENDMCIGKYAASVAGGGIVWMVILVLGIAGTSGYAFYKYRIQRYMDSEIRAIMAQYMPLDNQPEISSQAHEDV 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00983 622 CDD PA_VSR 48 174 - -
Gma07g00983 622 SMART egfca_6 513 555 IPR001881 GO:0005509
Gma07g00983 622 CDD EGF_CA 513 541 - -
Gma07g00983 622 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 10 602 - -
Gma07g00983 622 PANTHER VACUOLAR-SORTING RECEPTOR 1 10 602 - -
Gma07g00983 622 Gene3D Laminin 468 555 - -
Gma07g00983 622 ProSitePatterns Calcium-binding EGF-like domain signature. 513 539 IPR018097 GO:0005509
Gma07g00983 622 Gene3D - 20 183 - -
Gma07g00983 622 Pfam PA domain 60 160 IPR003137 -
Gma07g00983 622 Gene3D Laminin 407 455 - -
Gma07g00983 622 SUPERFAMILY PA domain 89 169 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00983 Gma-Chr7 10970080 10975552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00983 12 622 Miscellaneous Gene Families AT3G52850 69.643 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00983 - - gmx:100815266 1322.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02504 09 50355811 50361873 Gma07g00983 07 10970080 10975552 PCT
Gma07g00983 07 10970080 10975552 Gma09g02504 09 50355811 50361873 PCT