Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00838 ATGAGCTTGAAGAAAAGGGCACTTTCCATTAACATTGAAGAGGCTGCTGTGGACTTCTTCAACCACCTCTTGCAGGAGAAGCCTAGGATTCCAGTCTTTATTCCTTTGATTCTGATTGCTTGGGCAATTGAGAGATGGGTCTTCTCTGCCTCCACTTGGGTTCCTCTTGCACTTGCTGTGTGGACTACTATACAGTACGGTAGATACCAACGCAAACTGCTTGTGGAGGATTTGGATAAGAAATGGAAGCGAATCATACTGAACGTTTCGCCCATCACACCATTGGAGCACTGTGAGTGGCTGAATAAGTTGTTGACAGAAGTCTGGTCCAACTATTTTAATCCCAAGTTTTCAATAAGGATATCTGCTATAGTTGAGAAACGTTTAAAGCTCCGGAAACCAAGGCTCCTAGAAAGAGTTGAACTGCAGGAGTTTTCGCTAGGATCATGCCCCCCTAGCTTGGCTCTGCAAGGGATGCGGTGGTCAACTATTGGTGATCAGAGATTTCTGCAACTGGGTTTTGATTGGGATACAAATGAAATGAGCATTTTGTTGCTTGCTAAGCTTGCAAAGCCATTGATTGGAACTGCTCGAATTGTGATTAACAGTCTTCATATCAAGGGTGATCTTCTTGCCTCACCAATTCTAGATGGAAAAGCACTCCTGTATTCTTTTGTATCAACTCCTGAGGTGAGAATAGGAGTTGCCTTTGGAAGCGGTGGAAGCCAATCACTTCCTGCCACTGAATGGCCTGGTGTTTCTTCTTGGCTGGAAAAACTTTTTACTGACACCTTGGCTAAAACCATGGTAGAACCTCGGCGTCGTTGTTTCACTTTGCCAGCTGTTGATTTAAGGAAAAAAGCAGTTGGAGGCATTATATATATTAGAGTGATTTCAGCAAATAAACTTTCTAGGAGTTGCTTTAAGACATCTAGGAGGCAACCAAATGGTACATCCAATGGTTGTTCAGAGGATAATTTTGATGATAAGGATCTACAAACATTTGTAGAGGTAGAAATTGAGGAATTAACAAGGAGAACAGATGTCAGACTGGGTTCAACCCCCAGATGGGATGCACCATTTAATATGGTTTTACACGATAATGCAGGAACTCTACGTTTCAATCTTCACGAGAGTAGTCCCAACAACGTGAGATGTGACTACCTAGCAAGTTGTGAAATCAAGTTGAGGCATGTTGAAGATGATTCAACAATTATGTGGGCAATAGGACCTGATTCTGGAGTCATAGCAAAGCAAGCACAGTTTTGCGGAGAAGAAATTGAAATGGTTGTCCCATTTGAGGGGTCCAACTCAGGAGAGTTGAAGGTGAGCATTGTAGTAAAAGAGTGGCAATATTCTGATGGTTCACATAGTTTGAATAGTCTCCGGAGTAGCAGCTCTCAGCAGTCAATTAATGGATCACCAAATTTTCAGTTAAGAACTGGAAGGAAAATTAATGTAACTGTTGTGGAAGGAAAGGATCTTGCTGCAAAAGACAAATCTGGAAAATTTGACCCTTACATCAAATTGCAGTATGGAAAGGTTGTCCAGAAAACAAGGACTGTTCATACTCCAAATCCTGCCTGGAATCAGACGTTTGAATTCGATGAGATTGGTGGTGGGGAATACTTAAAAATAAAAGGTTTTTCTGAAGAAATTTTCGGAGATGAAAACATTGGTAGTGCACATGTGAATTTGGAAGGACTGGTTGAGGGCTCAGTCAGGGACGTATGGATCCCTCTTGAAAGAGTGCGTTCAGGAGAATTAAGACTTCAAATATCAATTAGAGCGGATGATCAAGAAGGATCGAGGGGTTCAGGTTTGGGCTTAGGAAATGGTTGGATTGAACTTGTTCTGATAGAGGGAAGGGGTCTAGTTGCTGCCGATGTCAGAGGCACAAGTGATCCATTTGTGAGGGTACACTACGGAAATTTTAAGAAAAAGACAAAGGTCATATACAAAACTCTTAACCCTCAGTGGAACCAGACCTTAGAGTTCCCTGATGATGGAAGTCAACTAATGCTTTATGTCAAGGACCACAATGCATTACTACCCACATCAAGTATAGGTGAATGTGTTGTAGAATATCAAAGGTTGCCTCCCAACCAGACCGCTGACAAGTGGATACCTCTCCAAGGGGTGAAAAGGGGTGAAATTCACATCCAAATTACTAGAAAAGTTCCAGAGATGCAGAAGAGGCAAAGTCTAGACTCTGAACCTTCCTTGAGTAAACTACACCAAATTCCTAACCAGATAAAACAGATGATGATCAAGTTCAGGTCCTTCATAGAGGATGGAAATCTTGAAGGACTCTCTGCAACATTGAGTGAGCTAGAAACTCTAGAGGATACACAAGAAGGGTATATAGTTCAGCTGGAGACTGAGCAAATGCTTCTTCTCAGCAAAATAAAGGAACTTGGCCAAGAGATCATTAATTCTTCTCCTTCCCTGAGCAGGAGATCTTATTCAATTGGAAACTGA 2481 0.4196 MSLKKRALSINIEEAAVDFFNHLLQEKPRIPVFIPLILIAWAIERWVFSASTWVPLALAVWTTIQYGRYQRKLLVEDLDKKWKRIILNVSPITPLEHCEWLNKLLTEVWSNYFNPKFSIRISAIVEKRLKLRKPRLLERVELQEFSLGSCPPSLALQGMRWSTIGDQRFLQLGFDWDTNEMSILLLAKLAKPLIGTARIVINSLHIKGDLLASPILDGKALLYSFVSTPEVRIGVAFGSGGSQSLPATEWPGVSSWLEKLFTDTLAKTMVEPRRRCFTLPAVDLRKKAVGGIIYIRVISANKLSRSCFKTSRRQPNGTSNGCSEDNFDDKDLQTFVEVEIEELTRRTDVRLGSTPRWDAPFNMVLHDNAGTLRFNLHESSPNNVRCDYLASCEIKLRHVEDDSTIMWAIGPDSGVIAKQAQFCGEEIEMVVPFEGSNSGELKVSIVVKEWQYSDGSHSLNSLRSSSSQQSINGSPNFQLRTGRKINVTVVEGKDLAAKDKSGKFDPYIKLQYGKVVQKTRTVHTPNPAWNQTFEFDEIGGGEYLKIKGFSEEIFGDENIGSAHVNLEGLVEGSVRDVWIPLERVRSGELRLQISIRADDQEGSRGSGLGLGNGWIELVLIEGRGLVAADVRGTSDPFVRVHYGNFKKKTKVIYKTLNPQWNQTLEFPDDGSQLMLYVKDHNALLPTSSIGECVVEYQRLPPNQTADKWIPLQGVKRGEIHIQITRKVPEMQKRQSLDSEPSLSKLHQIPNQIKQMMIKFRSFIEDGNLEGLSATLSELETLEDTQEGYIVQLETEQMLLLSKIKELGQEIINSSPSLSRRSYSIGN 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00838 826 Gene3D C2 domain 288 454 IPR035892 -
Gma07g00838 826 PANTHER OS01G0128800 PROTEIN 1 818 - -
Gma07g00838 826 Gene3D C2 domain 470 597 IPR035892 -
Gma07g00838 826 Gene3D C2 domain 609 726 IPR035892 -
Gma07g00838 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 611 724 IPR035892 -
Gma07g00838 826 Pfam C2 domain 615 711 IPR000008 -
Gma07g00838 826 Pfam C2 domain 484 581 IPR000008 -
Gma07g00838 826 Pfam C2 domain 292 402 IPR000008 -
Gma07g00838 826 ProSiteProfiles C2 domain profile. 463 579 IPR000008 -
Gma07g00838 826 PANTHER PLANT SYNAPTOTAGMIN 1 818 - -
Gma07g00838 826 ProSiteProfiles C2 domain profile. 585 709 IPR000008 -
Gma07g00838 826 SMART C2_3c 484 578 IPR000008 -
Gma07g00838 826 SMART C2_3c 292 408 IPR000008 -
Gma07g00838 826 SMART C2_3c 614 708 IPR000008 -
Gma07g00838 826 CDD C2 615 711 - -
Gma07g00838 826 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 94 280 IPR031468 GO:0008289
Gma07g00838 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 328 405 IPR035892 -
Gma07g00838 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 483 595 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00838 Gma-Chr7 8922452 8929474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00838 614 723 Lipid Metabolism Gene Families AT1G51570 29.508 2.14e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00838 - - gmx:100789237 1574.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00838 07 8922452 8929474 Gma08g00402 08 3386805 3393861 ECH
Gma07g00838 07 8922452 8929474 Gma07g00838 07 8922452 8929474 ECH
Gma07g00838 07 8922452 8929474 Gma09g01698 09 42634985 42642659 GST
Gma08g00402 08 3386805 3393861 Gma07g00838 07 8922452 8929474 PCT
Gma07g00838 07 8922452 8929474 Gma08g00402 08 3386805 3393861 PCT