Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00792 atggaaggggcgagacagggtgaggtggagacagtctcgccaatgggaggggcgagacaggctgatgtgatgCTAATTCTACTGCGAACGAACTGCTCAACTCAAGGGTTAAGCGCTCAAATATTTTTTGGCGCCAAAAATTTCAACACTATGCTTAGATATTTTCACCGAATTTCCGGCGACCGGCCACCCACCACTCCGCCGGTTCAGCAGCCCAACGGCAACGTCACTGCCGCTGTCAACCAACGGCCACCGGCCGATGACGTCAGAGGAACCGACACGCCACCGGAAAAGGTGCCGCGGCGCGTTTTACCGGCAAATTTCGCGCCAAACGAGAAAGAATCTGGTCCCTCCCTGTTTGAAAGCATCATGCACAAATTTGTCAAGGTCGACGACAACGAAAGAGTTACTCAGAGGAGCCACTCATTGAATGGTAGTTTGCCTAAATCTTCTTTACCAGTGGGAATATGTGCTGATACTGATTGTAAAGTGGTGAACAAGGCAGAAGCAGCTTTTCAACCTTTGGTGAAAGTGAAAGATAATGCTGTGAATTTCAAGGAAAAGGCTAATCAAGAGAACATTGTGGTGGTTGAAACTGATGATAATGTCACTGGACCAGAAACCCCAGGGATGCTGCCTCTTGCTTCTCATGTGAAGCGAAGTCGAGAGGATGGATCCAAGTTTGGTTCGTTGCTGAATTCTGGCAAACGAGTTAGATTTCTTGACGGTTCATTGGAATTGGACATGACTAAGAAGGAAGCAGAAGTGGCTAGCAAGTTTGAATGGCTCGATCCTTCTCGAATCAGGGATGCTAATGGAAGAAGGCCGGATAATCCTTTGTATGACAGGACAACGCTTTATATTCCTCCAGAAGTTTTGGGGAAAATGTCAGCATCACAGAAACAGTATTGGAGTGTCAAATGTAAATATATGGATGTTTTGCTTTTTTTTAAAGTGGGAAAATTTTATGAGCTTTATGAAATGGATGCCGACATTGGCCATAAGGAGCTTGATTGGAAAATAACGTTAAGTGGTGTTGGAAAATGTCGGCAGGTTGGTATATCTGAAAGTGGGATTGATGATGCTGTTCTAAAGCTGGTTGCACGTGGGTATAAGGTTGGACGAGTGGAGCAATTAGAGACATCTGGAGAAGCAAAGTCTAGAGGAGCTAACTCTGTTGTTCGGAGAAAATTAGTTCAGGTACTCACTCCATCAACCAATGTGGATGGTAATATTGGTCCTGATGCTGTTCACCTTCTTGCAATAAAAGAGGAAAACAATGTCTTGGATAATGGTGCAGTTGTGTATGGATTTGCTTTTGTTGATTGTGCTCGGCTTAGATTTTGGGTTGGCTCCATAGACGACGATGCTTCCTGTTCTGCTTTGGGGGCTTTATTGGTGCAAGTGTCACCCAAGGAAGTTATATATGATAGTAGAGGTTTGTCCAAAGAAGCTCAGAAGGCACTTAGAAAATTCTCGTTGAATGGTGAGATGACACTACAGTTCACTCCAGTTCAGTCCATCACTGACTTGGTGAACAATGAAATTAGGGATTTAATTCACTCAAAGGGATACTTCAAAGGCTCGTCTCATTTGCTGGATCATGTACTGAGCAATGTGATTCATCGTGAAATCACCTTGTCTGCCCTAGGCAGGCTGATTGGTCATCTGGATAGATTGATGCTGGATGATGTCCTACAGAATGGGGATTTATATCCATACCAAGTTTACAAGGGTTGCCTCAAAATGGATGGTCCAACAATGATAAATCTAGAACTCTTTTTCAATAATGAGGATGTTTCAGGTTCATTGTACAATTGTCTTGATAAGTGTGTAACTTCATCTGGAAAGCGGCTTCTTAGGAACTGGATCTGCTGTCCATTAATAGATCCTGAAATAATTAACAAAAGGCTTGATGTAGTGGATGATCTAATGGCTAACCCAGAGATTGTGCCACATATTGCTCAACATCTTCGCAGGCTTCCAGACTTGGAACATTTGCTTGGCCGAATTAAGTCCAGCCTTCAATTATCAGGCCCTCTCTTATTGCCCCTATTGGGAAAGAAAATATTGAAGCAGAGGGTGAAAGTGTTTGGATCACTTGTGAGAGGCCTTCGGACTGCTTTGAGTTTGTTGCTTCTTCTACAGAAAGAGCAGCCTCTAATATCGTCTTTGACCAAAGTTTTTAAACTTCCAATTCTGACTGGTAGTAACGGGCTTGATCAATTTCTTGCTCAGTTTGAAGCAGCAGTAGACAGTGACTTCCCAAATTACCAGAATCACAATGTTGCAGATTCTGATGCTGAAACACTCAAAATACTTGCTGAATTATTTTTGGAGAAAGCTGCTCAGTGGTTTGAAGTTGTTCATGCCATCAATTGCATTGATGTATTAAGATCTTTTGCTGTTACTTCTACCTTTTCTTGCGGAACTATGTCTAGGCCAGTTATAGTGGCATCAAAAGGTACAAGTAAAGACAATGGCAGAACAGTGCTCAAGATGAAGGGACTATGGCATCCATTTGCCCTTGGAGACAGTGGATGTTTGCCTGTCCCCAATGATGTGATCCTTGGTGAGAATGAAGATGGGTTGTATCCTCGAACTTTGCTGCTTACTGGACCAAACATGGGTGGAAAGTCAACACTTCTGCGTTCCACCTGTCTGGCTGTTATTATGGCCCAGCTAGGCTGTTATGTGCCATGTGAAAGTTGTGTTCTCTCAGCTGTGGATATCATCTTCACACGACTTGGAGCCAAAGATAGAATCATGACAGGCGAGAGTACCTTCTTTATTGAGTGTACTGAAACGGCATCGGTGCTTCAGAATGCTACTCAAGATTCTCTTGTTATCCTTGATGAATTGGGTCGGGGAACAAGCACTTTTGATGGCTATGCCATTGCTTATGCAGTATTCCGGCATCTGATTGAAAAAGTTAACTGTCGCATGCTATTTGCCACCCACTACCATCCACTCACGAAAGAGTTTGCTTCTCATCCACGTGTTATAATGCAACACATGGCTTGTGCTTTCAATTCAAAATCGGATACCCACTCCATGCGTGATCAGGAACTAGTTTTCCTATATCGGCTTGCCTCCGGACCATGTCCAGAGAGCTACGGCTTGCAGGTGGCCCTCATGGCTGGAATCCCAGAAAAAACGGTAAACATTGCTTCTAAGTCAAGCCAGAAGATGAAAAAATCAATTGGACAAAGTTTTAGGTCAAGCGAACAGAGATCAGAGTTCTCAACCCTTCATGAAGAATGGTTGAAGACCTTGGTATCTATCTCACGCATAGAGGATTGTAACTCTTTGGATGAAGATGCTTTAGATACATTAATCTCTCTGTGGTATGAACTTAAAACTTCATTTATATCAGGCAAGTAA 3384 0.4214 MEGARQGEVETVSPMGGARQADVMLILLRTNCSTQGLSAQIFFGAKNFNTMLRYFHRISGDRPPTTPPVQQPNGNVTAAVNQRPPADDVRGTDTPPEKVPRRVLPANFAPNEKESGPSLFESIMHKFVKVDDNERVTQRSHSLNGSLPKSSLPVGICADTDCKVVNKAEAAFQPLVKVKDNAVNFKEKANQENIVVVETDDNVTGPETPGMLPLASHVKRSREDGSKFGSLLNSGKRVRFLDGSLELDMTKKEAEVASKFEWLDPSRIRDANGRRPDNPLYDRTTLYIPPEVLGKMSASQKQYWSVKCKYMDVLLFFKVGKFYELYEMDADIGHKELDWKITLSGVGKCRQVGISESGIDDAVLKLVARGYKVGRVEQLETSGEAKSRGANSVVRRKLVQVLTPSTNVDGNIGPDAVHLLAIKEENNVLDNGAVVYGFAFVDCARLRFWVGSIDDDASCSALGALLVQVSPKEVIYDSRGLSKEAQKALRKFSLNGEMTLQFTPVQSITDLVNNEIRDLIHSKGYFKGSSHLLDHVLSNVIHREITLSALGRLIGHLDRLMLDDVLQNGDLYPYQVYKGCLKMDGPTMINLELFFNNEDVSGSLYNCLDKCVTSSGKRLLRNWICCPLIDPEIINKRLDVVDDLMANPEIVPHIAQHLRRLPDLEHLLGRIKSSLQLSGPLLLPLLGKKILKQRVKVFGSLVRGLRTALSLLLLLQKEQPLISSLTKVFKLPILTGSNGLDQFLAQFEAAVDSDFPNYQNHNVADSDAETLKILAELFLEKAAQWFEVVHAINCIDVLRSFAVTSTFSCGTMSRPVIVASKGTSKDNGRTVLKMKGLWHPFALGDSGCLPVPNDVILGENEDGLYPRTLLLTGPNMGGKSTLLRSTCLAVIMAQLGCYVPCESCVLSAVDIIFTRLGAKDRIMTGESTFFIECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRMLFATHYHPLTKEFASHPRVIMQHMACAFNSKSDTHSMRDQELVFLYRLASGPCPESYGLQVALMAGIPEKTVNIASKSSQKMKKSIGQSFRSSEQRSEFSTLHEEWLKTLVSISRIEDCNSLDEDALDTLISLWYELKTSFISGK 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00792 1127 SUPERFAMILY DNA repair protein MutS, domain I 285 406 IPR016151 GO:0005524|GO:0006298|GO:0030983
Gma07g00792 1127 SUPERFAMILY DNA repair protein MutS, domain III 584 805 IPR036187 -
Gma07g00792 1127 MobiDBLite consensus disorder prediction 61 102 - -
Gma07g00792 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 829 1065 IPR027417 -
Gma07g00792 1127 SUPERFAMILY DNA repair protein MutS, domain II 419 594 IPR036678 GO:0005524|GO:0006298|GO:0030983
Gma07g00792 1127 Gene3D - 823 1112 IPR027417 -
Gma07g00792 1127 Pfam MutS domain II 419 568 IPR007860 GO:0005524|GO:0006298|GO:0030983
Gma07g00792 1127 Pfam MutS domain V 870 1064 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma07g00792 1127 SMART mutATP5 866 1062 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma07g00792 1127 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 281 1119 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Gma07g00792 1127 PANTHER DNA MISMATCH REPAIR PROTEIN MSH7 281 1119 - -
Gma07g00792 1127 Gene3D - 583 808 - -
Gma07g00792 1127 Gene3D DNA repair protein MutS, domain I 255 415 IPR016151 GO:0005524|GO:0006298|GO:0030983
Gma07g00792 1127 Pfam MutS domain I 299 409 IPR007695 GO:0005524|GO:0006298|GO:0030983
Gma07g00792 1127 Pfam MutS domain III 587 802 IPR007696 GO:0005524|GO:0006298|GO:0030983
Gma07g00792 1127 SMART DNAend 599 845 IPR007696 GO:0005524|GO:0006298|GO:0030983
Gma07g00792 1127 Gene3D MutS, connector domain 417 582 IPR036678 GO:0005524|GO:0006298|GO:0030983
Gma07g00792 1127 CDD ABC_MSH6_euk 833 1057 - -
Gma07g00792 1127 ProSitePatterns DNA mismatch repair proteins mutS family signature. 947 963 IPR000432 GO:0005524|GO:0006298|GO:0030983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00792 Gma-Chr7 8404269 8413401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00792 K08737 - gmx:100776965 2081.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00792 07 8404269 8413401 Gma07g00792 07 8404269 8413401 ECH
Gma07g00792 07 8404269 8413401 Gma09g01752 09 43130806 43139095 GST