Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00468 ATGGAGCTCGACCTCCGTTCATTCCTTCACTCTCCGACCTCCACCTCCTCCTCCGACGCCGACGCCGACGACGGCGCTCCTCCCCGCACCATCGATGATATTCTCAACGACTGTGACACTTCCTCTTCCTCACCCTCCCCTCCTTCTTCTCCCTCTCACTCACTCTCCAACAATTCCCGCCCTCAAAACCCCACACTCCAACAAAAACCACTCCAACCCGCACCCGATTCGTTTTCTCGGGTCAAACCCGCTGAATTCTCCGACCGCGCACGCGTTTCGCGCCCGTTCTCCTCTCTCCTGCACGGCGTCAGGTCCAATGCCAAGCCCGGCGCGGCGCTCGCCGCGGCGGCGGCGGCGTCTCGATCCGTTCCTACGCCGCACGCGGCGGCGATCATCTCCCGTAGGAAATCCGCGGCTGCGAATATTGTCGAATCGAGTTCGATCGCTGCCACCGGCGATGTTTCTTCCAAAGGCGAGTTGGGCGAGCCTAGCGAGAAATTCGATCCAGTGCCGCCGAAAATCGAGACTCCGTCTAGTGAAAGTGCTTCTGCTATTGGTGAACGTTTTGAGATTGATGCGGAAATTGTCACTgatttgaaggctggcagtgatgacattcaggtgcacactgataataataataataatgctgatgatgatgatgataatgataatgattcttctatcgtgagtgaGGAAAAGAGGGATTTAGATGAGGTTGACCGTGATCATGAGAAGGATATGAATTCTGCACCGTTTGATGACGATGATGATCGTGGGTTTGATGGAAAAGGCGATGATGAGAGAATCACTGCTACGGGTGTAGCTGTGGAAACAGAAGAAGAAGTAGTAGTGAGTAATGATATTAGTTCTATGGAAGATGTTAAGAATGAGGTGAGTGTTGGTGGTGATGATGAGGGTAGTTCCTTAGGTGATGTTGCTGAGCTAGTGGAAGAGAGGCTTGAGGAATTGGAAAACAGAAGGGCTGCTAAGAGAGCTGAGAAGAAACGGGAGTCTTCGATGAAGCCACTTGAATTGGCCGAGGAACTGGAGAAGAAGCGTGCTTCAACTGGTTTGCATTTGGAAGAGGGTGCTGCTGCCCAGCCAATGAGGCTTGAGGGCGTTCGGAGAGGGTCCACGACATTGGGATACTTTGATGTTGATGCTGGTAATGCGTTCACAAGGGCAATTTCGTCCCAAACATTCAGGCGTGAGCAAGGTTCCACCCGAGCCTTGGCAGTTCATGCTAATTACATTGCAGTAGGAATGTCAAAAGGGCTCATTGTTGTGTTTCCCAGTAAATATTCCATTCACCATGCTGACAACTCTGATGGAAAGATGATGATGCTTGCTATACAAGGTGATCGGTTGCATGCTCCAGTGACATCCATGTCTTTCAATCAACAAGGAGACCTTCTTTTAGCTGGTTATGGTGATGGCCATCTTACCCTGTGGGATGTACAGAAAGGGGTAGTGGCAAAAGTTATTAGTGGTGAACATACAGCACCAGTAGTACATACATTGTTTCTAGGACAGGATCCTCAGAATACTCGTCAATTTAAAGCAGTTACTGGTGATTGTAAGGGTCTGGTTCTCTTCCACATCATCTCAGTGGTTCCTTTGTTTAGTAGATTCTCCATCAAAACTCAGTGTCTTCTTGATGGGCAAAGTACGGGCTTGGTGCTTTCAGCTTCACCACTCCTTTTTGATGACTTCAGTGGAAGTGCTTCGCCTTATACCCAGGGAAACACCTCAGCCCCAGCCAGCAGTATAAGCAGCATGATGGGAGGTGTTGTTGGCGGAGATGCAGGTTGGAAACTCTTCAATGAAGCCCCTTCTTTGGTTGAAGAAGGTGTGGTTGTATTTGTCACCCATCAAACTGCTTTGGTGGTACGGCTGAGCCCTACGTTGCAAGTTTATGCTCAGCTCTCTAGGCCAGATGGAGTTCGGGAGGGTTCCATGCCATATACTGCATGGAAATACATGACACAAATATGTAGTTCTActgAAAATATGTCTGCAGAAGCTGTTGAAAGAGTTTCATTGCTTGCAATTGCTTGGGAACGGAAGGTTTTGGTTGCAAAGTTGGTCAAATCAGAATTAAAAGTATATGGAAGATGGTCTCTTGATGGTGCGGCTTTAGGTCTAGCATGGTTGGATGATCAGATGCTGGTAGTTCTCACTTCAAGTGGACAACTGTATTTATTTTCCAAGGATGGAACTGTGATTCACCAAACAAGTTTTTCTGTAGATGGTATTGGAGGAGATGATCTAGTCTCTTATCATACTCACTTCATCAATATATTTGGAAATCCTGAGAAAGCTTATCATAACTCTGTTGCTGTAAGAGGAGCTTCTATTTATATACTGGGCCCAACACATCTTCTTGTTTCTCGTCTTCTCCCTTGGAAAGAGCGTATTTCTGTTTTGCGGAAAGCAGGTGACTGGATGGGTGCCTTGAACATGGGAATGACTCTTTATGATGGCCATGCTCATGGAGTTGTTGACCTTCCTAGAACCTTGGATGCTGTACATGAAGCCATAATGCCCTTCTTGATGGAGTTGCTTACATCATATGTTGATGAAGTGTTCTCCTATATTTCAGTGGCATTCTGCAATCAAATTGGAAAACTGGACCAATCCAATGATTCAAATAGTAGAAGCAATTCAGTGCATTCTGAGATAAAGGAGCAATATGCCCGTGTTGGTGGAGTTGCCGTTGAATTTTGCTGTCATATCAAACGGACAGACATTCTTTTTGATGAAATTTTCAACAAGTTCGTGGATGTTCAACAGAGAGAAACATTTTTGGAGCTTCTGGAGCCCTATATTTTGAAGGACATGCTTGGATCTCTACCTCCCGAGATTATGCAAGAACTGGTAGAGTATTATAGCACCAAAGGGTGGTTACAGCGGGTTGAGCAATGTGTACTTCACATGGATATATCATCCTTGGATTTTAATCAGGTTGTCAGATTATGCCGGGAGCATGGACTATATAGTGCCCTGGTGTATGTCTTCAATAAAGGATTAGATGATTTTAGGGCACCTCTGGAGGAGTTGTTTGCTGTCTTACAAAATAGCCAAAAGGAAAGTGCTACTGCGCTTGGGTATCGAATGCTGGTTTATCTCAAGTACTGCTTTACAGGTCTTCCCTTTCCACCAGGCCGTGGAAGTATTCCTCCCTCACGTTTACCATCTCTTAGAAGAGAACTTGTAGAGTTTTTGTTAAAGGACACCTGTACTCCGAAATCACAGACAGTTTCAGACTTTGTGTACAGACGACCACACCTGAATCTTTATCTTCTCTTAAAGTTAGACACTGAAGCTACATTAGATGTCCTCAGATGTGCTTTCATGGAAGATGGAATTTCAAATGCCAGCTCATCTTCACCAGATTCAGCCAATAAACCTATAACGGAAGCAAAAAAGGAAAATGATAATGTTAACAAAACTCAAAATGCTTTGGTTCAGAACACAGTTGATGCTCTCATTCAAATAATTGATATGAATATTGTTCCCACAGATAAAACCTCTAGTAGTGGTGATGATGGGTTGATAAAAGATTGTCCTTCCAAGGACATAGGTTATTTGTTTGAGTTCATTGCATATTATGTTGCTCTCCAAAGGGCTAAGATTTCAAAGGGTGTGCTTTGTCAAATATTGGAATATTTGACATCAGATAGTCAGTTTTCAACTAATGTTTCTGTTCAAGGATCATCTCCAAAAAATAGAGAGAAGCAAGTGCTTGCACTTTTGGAAATACTTCCTGAATCAGACTGGGATGCATCATTTGTGCTAGATCTATGCGAGAGAGCAAAATATCATCAGGTAGTTTGCGGATTGATTCATAGTATCAGACATGAATATGTGGCGGCATTGGATAGTTATATGAAAGATGCAGATGAGCCTGTTCATGCTTTCTCCTTTATTAACAGAGCATTCTCACAGTTGACTGACAATGATCATGCAGCTTTTCGGTCAGCAGTCATATTTCGAATTCCTGAGTTGGTTGAACTAAGCAGGGAGGGCGCATTCCATATGGTTATCAGTCATTTTAGCAATGAAAGTTCCCGTATCATAACTGATCTTCACTGTCATCCAAGAAGTCTTTTCCTTTATTTAAAGACACTCATTGAGCTTCATTTATTTGGCACCCTAGACCTGTCTAATTTGAGAAAAGATGGTACTATGAATCCCCTTAATGGAAGGCAGGTTAAGGATCACCCACAAGGAGTCAGAGATTACTTAGAGAATATATCTAATTTCCCCAAGTACATGCGTGAAAATCCTATTCGAGTTCCTGATGATCTTAGTGAGCTTTACCTTGAGTTATTATGCAAGTATGAAGGTGGTTCAGTTCTCAAGTTTCTGGAAATGTTTGATAGCTATCGAGTTGAACATTGTTTACGCCTGTGCCAAGAATATGGCATTATAGATGCATCTGCGTTCTTATTAGAAAGGGTTGGTGATGTTGGTAGTGCTCTTTCACTTACACTTTCTGATCTATATGATAAATTTGTTGAGCTTGATACCGCTGTGGAAGCTGTAGTTTTAAACCATCGCAGAGTTGGTTCTTCACATATGGAAGTATTCAACAGTGTTTTGAAAACAAAGGAGGTAAGTGACATCCACAATTTATTGCGTGCCTGTATTGGTCTGTGTCAGCGGAACACCCCTCGTCTAAATCCTGAGGAGTCAGAGGCACATTGGTTTAAATTACTTGACTCGTTTTGTGATCCATTGATGGATTCAAATGTTGAAGAGAGAGCATATGAAAGTAAGAGTTATTTTGGAATGCTAGCTGGATCAGCAGATTCACAACAGGACAAAGACACCCATAAAAGCAGTTGGAAAATTTCAAAGTCCTGGACTGGTCATATCTTGAAAAAATTGCTATCCCAGTTCATTAAAGAGATTGTTGAGGGAATGATCGGTTTTGTTCACCTTCCAACTATCATGTCTAAACTCCTGTCTGATAATGGTAGTCAAGAATTTGGTGATTTTAAACTTACAATATTGGGAATGCTGGGAACATATGGCTTTGAAAGAAGAATTCTGGATGCTGCCAAATCATTAATAGAGGATGATTCTTTTTATACTATGAGTTTACTCAAAAAAGGGGCCTCCCATGGATACGCTCCCAGGAGTCTCGTGTGCTGTGTTTGTAATTGCCCTCTTACAAAGAACTCTGTTAGCTCTGGAATTCGGATTTTCAACTGTGGCCATGCAATTCATCTCCAATGTGAAGTTTCGGAAATTGAGGGATCGAGCAAAACATCTTCATCTGGATGCCCTGTATGCCCTGTATGCATGCCCAACCAGAAATCCCAGCAGTCTAGAAACAAATCAATCATTGCAGCAAATGGCTTGGTCAATAAATTCTCATCAAGGCCTCAATACCCCCATGGAAGTTCCATTCATCCTCATGACAGTGATTTATCAGATAATATGTATGGACAACAACAGATATCACGGTTCGAGATCTTGAGCAGCTTGCAGAAGAATCGGAGATTTATGCAAATAGAAAACTTGCCTCCATTGAAGCTTGCCCCACCTGCTGTGTACCATGAAAAGGTAAGTAAAGTGGCAAACTTTCTGACTGGCGAAAGTAGCAATAGTTCCAGTGCTATTGAGAAACAAAGTAGAAGCAAGCAAAATCGGGAGCTGAGAGTTAAGGGTTCATCAATTCGATTTCCTTTAAAATCAAGCATATTTGGCAAGGAGAAGACCAATAAGCGGTGA 5745 0.4249 MELDLRSFLHSPTSTSSSDADADDGAPPRTIDDILNDCDTSSSSPSPPSSPSHSLSNNSRPQNPTLQQKPLQPAPDSFSRVKPAEFSDRARVSRPFSSLLHGVRSNAKPGAALAAAAAASRSVPTPHAAAIISRRKSAAANIVESSSIAATGDVSSKGELGEPSEKFDPVPPKIETPSSESASAIGERFEIDAEIVTDLKAGSDDIQVHTDNNNNNADDDDDNDNDSSIVSEEKRDLDEVDRDHEKDMNSAPFDDDDDRGFDGKGDDERITATGVAVETEEEVVVSNDISSMEDVKNEVSVGGDDEGSSLGDVAELVEERLEELENRRAAKRAEKKRESSMKPLELAEELEKKRASTGLHLEEGAAAQPMRLEGVRRGSTTLGYFDVDAGNAFTRAISSQTFRREQGSTRALAVHANYIAVGMSKGLIVVFPSKYSIHHADNSDGKMMMLAIQGDRLHAPVTSMSFNQQGDLLLAGYGDGHLTLWDVQKGVVAKVISGEHTAPVVHTLFLGQDPQNTRQFKAVTGDCKGLVLFHIISVVPLFSRFSIKTQCLLDGQSTGLVLSASPLLFDDFSGSASPYTQGNTSAPASSISSMMGGVVGGDAGWKLFNEAPSLVEEGVVVFVTHQTALVVRLSPTLQVYAQLSRPDGVREGSMPYTAWKYMTQICSSTENMSAEAVERVSLLAIAWERKVLVAKLVKSELKVYGRWSLDGAALGLAWLDDQMLVVLTSSGQLYLFSKDGTVIHQTSFSVDGIGGDDLVSYHTHFINIFGNPEKAYHNSVAVRGASIYILGPTHLLVSRLLPWKERISVLRKAGDWMGALNMGMTLYDGHAHGVVDLPRTLDAVHEAIMPFLMELLTSYVDEVFSYISVAFCNQIGKLDQSNDSNSRSNSVHSEIKEQYARVGGVAVEFCCHIKRTDILFDEIFNKFVDVQQRETFLELLEPYILKDMLGSLPPEIMQELVEYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYVFNKGLDDFRAPLEELFAVLQNSQKESATALGYRMLVYLKYCFTGLPFPPGRGSIPPSRLPSLRRELVEFLLKDTCTPKSQTVSDFVYRRPHLNLYLLLKLDTEATLDVLRCAFMEDGISNASSSSPDSANKPITEAKKENDNVNKTQNALVQNTVDALIQIIDMNIVPTDKTSSSGDDGLIKDCPSKDIGYLFEFIAYYVALQRAKISKGVLCQILEYLTSDSQFSTNVSVQGSSPKNREKQVLALLEILPESDWDASFVLDLCERAKYHQVVCGLIHSIRHEYVAALDSYMKDADEPVHAFSFINRAFSQLTDNDHAAFRSAVIFRIPELVELSREGAFHMVISHFSNESSRIITDLHCHPRSLFLYLKTLIELHLFGTLDLSNLRKDGTMNPLNGRQVKDHPQGVRDYLENISNFPKYMRENPIRVPDDLSELYLELLCKYEGGSVLKFLEMFDSYRVEHCLRLCQEYGIIDASAFLLERVGDVGSALSLTLSDLYDKFVELDTAVEAVVLNHRRVGSSHMEVFNSVLKTKEVSDIHNLLRACIGLCQRNTPRLNPEESEAHWFKLLDSFCDPLMDSNVEERAYESKSYFGMLAGSADSQQDKDTHKSSWKISKSWTGHILKKLLSQFIKEIVEGMIGFVHLPTIMSKLLSDNGSQEFGDFKLTILGMLGTYGFERRILDAAKSLIEDDSFYTMSLLKKGASHGYAPRSLVCCVCNCPLTKNSVSSGIRIFNCGHAIHLQCEVSEIEGSSKTSSSGCPVCPVCMPNQKSQQSRNKSIIAANGLVNKFSSRPQYPHGSSIHPHDSDLSDNMYGQQQISRFEILSSLQKNRRFMQIENLPPLKLAPPAVYHEKVSKVANFLTGESSNSSSAIEKQSRSKQNRELRVKGSSIRFPLKSSIFGKEKTNKR 1914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00468 1914 MobiDBLite consensus disorder prediction 1 104 - -
Gma07g00468 1914 Coils Coil 314 341 - -
Gma07g00468 1914 Coils Coil 1139 1159 - -
Gma07g00468 1914 MobiDBLite consensus disorder prediction 202 275 - -
Gma07g00468 1914 MobiDBLite consensus disorder prediction 145 189 - -
Gma07g00468 1914 MobiDBLite consensus disorder prediction 228 275 - -
Gma07g00468 1914 Pfam Region in Clathrin and VPS 1436 1515 IPR000547 GO:0006886|GO:0016192
Gma07g00468 1914 PANTHER VACUOLAR PROTEIN SORTING VPS41 270 1842 IPR045111 GO:0006623
Gma07g00468 1914 Pfam Golgi CORVET complex core vacuolar protein 8 935 1119 IPR025941 -
Gma07g00468 1914 SUPERFAMILY RING/U-box 1713 1779 - -
Gma07g00468 1914 MobiDBLite consensus disorder prediction 35 74 - -
Gma07g00468 1914 MobiDBLite consensus disorder prediction 1126 1148 - -
Gma07g00468 1914 Gene3D - 377 525 IPR015943 GO:0005515
Gma07g00468 1914 ProSiteProfiles Zinc finger RING-type profile. 1720 1768 IPR001841 -
Gma07g00468 1914 CDD RING-H2 1720 1768 - -
Gma07g00468 1914 ProSitePatterns Trp-Asp (WD) repeats signature. 473 487 IPR019775 -
Gma07g00468 1914 ProSiteProfiles Trp-Asp (WD) repeats profile. 461 495 IPR001680 GO:0005515
Gma07g00468 1914 MobiDBLite consensus disorder prediction 1870 1895 - -
Gma07g00468 1914 PANTHER - 270 1842 - -
Gma07g00468 1914 SUPERFAMILY WD40 repeat-like 401 745 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00468 Gma-Chr7 4295201 4308130 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00468 K20178 - gmx:100780869 3568.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00468 07 4295201 4308130 Gma07g00468 07 4295201 4308130 ECH
Gma07g00468 07 4295201 4308130 Gma16g00163 16 1643388 1656671 GST