Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00467 ATGTCTTTCACTGCAACCAAGTTTTCACCTTCTCCTCTCCCTCTCACTTCCACCACCCCCAGATCCAATGACAAGCCTCTCTCTTTCTCCTTCGATCACTCCAAACCCAACCCTTCTTCCTCCTTCCTTGGATCCACTCGCAAGCTTCTTCGCTTCAATGCTCTCGCTAGGCCTCATGCTCACCCTCGTGCTTCTTCTTCCCCTGCTGCTGCTGTTCTTCTCGAACGAACCTCCAATCTGCTTGTCACAAAAGAGGAAGGGTTGGAACTCTATGAAGACATGATATTAGGGAGGTTTTTTGAGGACAAGTGCGCTGAGATGTATTATAGGGGCAAAATGTTTGGTTTTGTTCACTTGTACAATGGCCAAGAGGCTGTGTCAACTGGGTTCATCAAGCTTCTGAAGAAGGAAGATTCTGTAGTGAGCACCTACAGAGATCATGTTCATGCATTGAGTAAGGGGGTCCCATCTCGGCAAGTGATGAGTGAACTGTTTGGGAAGGCGACAGGGTGCTGCCGAGGTCAAGGTGGTTCAATGCATATGTTCTCAAAAGAGCACAACTTGCTTGGTGGATTTGCCTTCATTGGTGAAGGAATTCCGGTGGCCACCGGGGCTGCATTTTCGAGCAAGTACAGAAGAGAGGTGTTGAAGCAGGCAGATTGTGATCATGTGACATTGGCATTTTTTGGAGATGGGACTTGTAATAATGGGCAGTTCTATGAATGCCTGAACATGGCAGCTCTGTGGAAATTGCCAATTGTGTTTGTGGTGGAGAATAATTTGTGGGCTATTGGGATGTCGCATCTCAGGGCAACTTCAGATCCTCAGATATGGAAGAAAGGGCCGGCATTTGGAATGCCAGGGGTTCATGTAGATGGGATGGATGTTTTGAAGGTCAGAGAGGTGGCAAAGGAGGCAGTTGAAAGGGCTAGAAGAGGAGATGGACCAACTCTAGTGGAATGTGAGACCTATAGATTTAGAGGGCATTCATTGGCTGATCCCGATGAGCTTCGTGACCCTGCTGAGAAGGAACACTATGCTGGTAGGGACCCCATCACCGCATTGAAGCAATACCTTATTGAGAACAATTTAGCCAATGAGCAAGAATTGAAGGCCATAGAGAAGAAAATCGACGAGATCCTCGAGGACGCTGTTGAGTTTGCAGACAGCAGCCCTCTTCCACCCCGCAGTCAGCTTCTGGAGAATGTCTTTGCTGATCCGAAAGGCTTTGGAATCGGACCAGATGGCAGGTATAGATGTGAGGATCCAAAATTCACTGAAGGCACAGCTCATGTCTAA 1299 0.4804 MSFTATKFSPSPLPLTSTTPRSNDKPLSFSFDHSKPNPSSSFLGSTRKLLRFNALARPHAHPRASSSPAAAVLLERTSNLLVTKEEGLELYEDMILGRFFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPSRQVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFSSKYRREVLKQADCDHVTLAFFGDGTCNNGQFYECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAVERARRGDGPTLVECETYRFRGHSLADPDELRDPAEKEHYAGRDPITALKQYLIENNLANEQELKAIEKKIDEILEDAVEFADSSPLPPRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAHV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00467 432 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 84 405 IPR017597 GO:0004739|GO:0006086|GO:0043231
Gma07g00467 432 Coils Coil 363 383 - -
Gma07g00467 432 Gene3D - 58 413 - -
Gma07g00467 432 MobiDBLite consensus disorder prediction 1 42 - -
Gma07g00467 432 Pfam Dehydrogenase E1 component 94 394 IPR001017 GO:0016624
Gma07g00467 432 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 5 432 - -
Gma07g00467 432 CDD TPP_E1_PDC_ADC_BCADC 90 388 - -
Gma07g00467 432 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 5 432 - -
Gma07g00467 432 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 82 407 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00467 Gma-Chr7 4287207 4290801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00467 5 432 Acyl Lipid Metabolism Gene Families AT1G01090 78.704 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00467 K00161 - gmx:100793091 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00467 07 4287207 4290801 Gma07g00467 07 4287207 4290801 ECH
Gma07g00467 07 4287207 4290801 Gma16g00162 16 1636697 1640193 GST