Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00268 ATGCCCCCAAGATCAGGAAAAGGGAAATCAAATAAAGCAAAGGCAGAGAAAAAGAAAAAGGAAGAGAAAGCTGCAGCAGCACCTTCTCTTGTTGACATCACTGTGGTCACCCCATATGACACACAGATTGTCTTGAAGGGTATCTCTACTGATAAGATACTTGATGTAAGAAAACTATTGGCTGTGAAGGTGGAGACATGCCATTTCACAAACTATTCTTTATCTCATGAGACCAAAGGGCAGAGATTAAATGACAGAGTGGAAGTTGTTACCCTAAAGCCATGTCTTCTAAGAATGGTTGAAGAGGATTATACAGATGAAGCCCAAGCAATTGCGCACGTGCGGAGGGTCTTGGACATTGTGGCCTGCACAACAAGGTTCGGTAGGCCCAAACGGAGCGTAGCAAGCTCAGAGTCAAGGCCCAAGAAAAATGGTAAGGCCCAACATCAGAACCAGACAAGTTTGAGCCCACCGGGGACACCGAATGGGGAATCCCGGGTCGGGTCACCGTCGTCGGAGGCGCCACCGTCGGCGATCTTGGATAACGTGGGGATGAAGGCCATTCACCCAACACCGAAGCTCTCAGATTTCTACGAGTTCTTCTCCTTCTCTCACCTCTCTCCCCCGATTTTACATTTGAAGAGATGTGAAGTGAAGGATGAAGAGGATAGGCGCAAAGGAGATTACTTTCAGCTTCAGGTTAAAATATGCAATGGGAAGGTAATAGAAGTGGTTGGTTCTGAGAAAGGGTTTTACACAGTAGGGAAGCAGTCTCTGCACAGCCACACCTTGGTTGATCTTCTCCAACAGCTCAGCCGAGCCTTTGCTACCGCATATGAATCATTGATGAAAGCCTTTTTGGAACGTAATAAGTTTGGAAATCTTCCGTATGGATTCCGAGCAAATACATGGCTTGTCCCTCCGTCTGTCGCAGAGTCTCCTTCAATCTTTCCTGCATTACCTGCTGAAGATGAAAACTGGGGTGGTAACGGTGGTGGCCAAGGAAGAAATGGTGAATTTGAGCTTAGACCATGGGCAACAGATTTTGCAATACTGGCCTCTCTTCCTTGCAAAACTGAGGAGGAGAGGGTGGTTAGAGATAGAAAAGCATTTCTGCTTCACAGTCAGTTTGTTGATACCTCAATATTTAAGGGTGTTGCGGCTATACAGCATGCCATGGAATCCAAGTTAAATACCAAGAATGAATTGAATTCTTATCCAGATTCTGTTCTGCATGAAGATCACGTGGGAGACTTATCCATTATAGTCAAACGTGATATCCAGGATGGAAATGCAAAGTACAATTCTTTACTGGATGAATCTAGCATGCATAAGGTGGATGCTCAGAAGAATTTACTCAAAGGGTTGACTGCAGATGAAAGTGTAATTGTTCATGATATGTCTTCCTTGGCTGTTGTTGTTGTACACCACTGTGGATATACTGCAACGGTAAAGGTTGTGGGTAATGTGAACACAAGGAAGCCTAAAGTTCGAGATATTGAGATAGATGATCAGCCAGATGGAGGGGCAAATGCTCTCAACATCAACAGTTTGAGGGTACTGCTTCACAAGTCGGGAGCTGAGTCATTAGAAGGGACTTTATCATCCCTGTCAAATTCGAATGACTTAGATGCTTCTAAAGTCCTTGTTCGGAAGGTGGTTCAAGAATGTATGGAAAAGATAAAGGAGGAGCCAAGTGCTTCAGAAAGGTCTATTCGATGGGAACTTGGTTCCTGTTGGATCCAGCATTTGCAAAAACAGGAAACTTCAACAGATAACAGTTCCAAAAACAAAGAAGATGGCAATGATCTTGAGCAAGCTGTTAAAGGTCTTGGAAAGCAATTTAAATTTTTGAAGAGGAGAGAGAAGAAATCCAATAATCTAGATGGTGCAGATTCTAGGGAGCAAAATGACTCTAGACTTGCAAACATGAATGATGTTGCGGATAAAGTTGAGCCAAACAATGATGACTTAAGTAACTCTAATGAATTAGAGAAACTACTTTCTGAAGAAGCATTTTTGCGTCTCAAAGAATCTGGAACTGGTCTTCACACAAAGtcagtggatgagcttatcagcatggcacacaagttttatgatgaagttgccttgccaaagctggctatggactttggatcactggaactttctccagtcgatggtcgtacactgactgactttatgcaTTTAAGAGGATTACAGATGCGATCTTTGGGTAAAGTGGTTAAACTTGCGGAGAATCTTCCACACATACAATCCCTTTGTATTCATGAGATGATCACTCGAGCTTTCAAGCATCTACTTAAAGCAGTTACTGCCTCTGTTGACAATGTAGCTGATCTATCTGCAGCCATTGCATCAACACTGAATTTCTTACTTGGTGGGTCTCGAACAGAAGATGGCGCTGACCAAATTTTGATTGATGATCATAATCTCAGAATTCAATGGTTACATCTGTTTTTGTCCAAAAGATTTGGCTGGACACTAAATGATGAATTTCAACATTTAAGGAAGTTGTCGATTCTCAGAGGGCTCTGTCACAAGGTatcagcatctcgtcgtcttgttctattttttttagatgaagtttttattaattgcacttgtttttattctcaggttggattggaattgttcccaagagattatgacatggagtccagTAAGCCCTTTGGGAAAAATGATATTATCAGCCTGGTTCCTGTTTGCAAGcatgtagggtgctcctcattagatggacgcaatttattggagtcttccaaaattgctcttgataaaggaaagcttgaggatgctgtgaattatggaacaaagGCATTAGCTAAGATGATGGCTGTTTGTGGACCCTTTCATCAAAATACTGCAAGTGCATATAGTCTTCTAGCTGTGGTTCTCTACCACACTGGAGATTTTAACCAGGCCACCATCTATCAGCAAAAGGCCTTGGATATAAATGAGAGGGAGCTAGGGCTTGACCACCCTGACACTATGAAAAGCTATGGGGATCTTTCCGTCTTTTATTATCGTCTGCAACACATTGAGTTGGCTCTGAAGTATGTTAATCGTGCTCTATTCCTTCTACATTTTACATGTGGGCTGTCTCATCCAAACACAGCAGCTACTTATATAAATGTGGCTATGATGGAAGAGGCCATGGGAAATGTTCATGTGGCACTCAGATACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGCAGATCATATACAGACTGCCGCAAGCTATCACGCCATAGCTATAGCTCTTTCATTGATGGATGCATTTTCTCTGAGTATGCAACATGAGCAAACTACACTAAAGATACTTCAAGCAAAGCTTGGATCAGAAGATCTTCGTACACAGGATGCTGCCGCGTGGCTTGAATATTTTGAATCAAAAGCCATAGAGCAGCAAGAAGCAACTAAAAATGGAACTCCAAAGCCTGATGCATCCATTGCAAGTAAAGGTCACCTTAGCGTGTCAGATCTCCTGGATTTTATTAGTCCCAACCCAAAAGGAAATGATGCTCGGAGGAAACAGAGGCGTACAAAGATACTCTCAACAAGTGATAACAACAGTCAAGAACATGATGAAGCAATAGCTGATGAGACAATTCTTTTTGATAACTCAAAAGATGCTCTAAGTATGATACAAGGCAAAATAGAAGAAACAAATGGCAAACTTGATTCTCAAGTACAGAAACAAAATGGTGATTTCACTGGGTACAGACCAGTGACAAGTGAACCTGTTTATGAGGCGTCATCTGATGAAGGTTGGCAAGAAGCCAATTCAAAAGGGCGGTCAGGAAATGCTGCTAACCGCAAGTTTGGGCACAAAAAGCGACATCATCTATCAAAGCTCAGCATTAATGGTTCAAATAATTACATTTACAGGGAAGGCAGTTCTAGGAATGAGATTACTTCGCCACCACAAAGAGGAGTTCCAAAAGTCATGTTAGACATGTCATCTCCATCTAGACAATCAAAATCTAGAAACTTAACTTTGAATGAGGATTCTGTTAATCATTCAACAAAAGCTTCTGTGTCCAAAATTTCATCTCCGGCATCTCTGAGTTCCTTGGCTTCAAAGTCTATATCTTACAAAGAAGTGGCTTTAGCACCACCAGGAACTGTTTTAAAGCCATTGTTGGAAAAGGCTGACATGGAAAGGGTTAATGCTGGAGATGAGATATGCTGCAATCCTGCTGTGACATCAATAAGTGAAGGTAGTTGCCAAAGTTCCATAACTAATACAGTTTGTCAGCATGATGAAACAGAGGAAACTCATGAAAATGAACCTCAACAAGAAAGTTCTGGATCGGAACTTGAGAAGGTTTCTGATCAGGCAAAATCTACAGCAGAAACAAATGGCAGTAAGCTTTCAGCTGCGGCCAAACCTTTCAATCCAGGAATGTTGTCCATGTCTCACCATTTAAATTCAGCTTCCTTCACAAGCATGTATGATACAGATGTTAGTCAAGGCATGCACGTGGAGACTGTGCTTCCCCCTGCTGTTGCTAGGGTCCCTTGTGGGCCTAGATCGCCTCTGTATTATAGAACCAACTATACTTTTCGCATGAAACATGGTTCTACTAAAGGTCAAACCTCTATCAGAGAAAGAAGTGGATTTGGGTCTCCAAGAATAATGAATCCACATGCGCCTGAGTTTGTTCCCAGAAATGCTTCTCAAATAGAAGCCAATGATGCCAATTCAAATGTTTCCAATGAGCATAACTCTTTGTCTGACATAGGCATGTCAGAAGAAAACAAGCTAGATGAAAATTTTGTTGAAATCAATGGGAGTTCCAACAAAAACAGTATTTCTGAATCTGAGAAGTCCGAGATAGCTAGGCAGATACTGCTCAGTTTTCTAGTGAAATCTGTCAAGGAAAATATTGATTCTGTGGATGAGTCTAAGGATGGTGAAGGAAAAATTGAGATCTTGGAAAGTTGTTCTGATGAAATAGCCAAAGACAGTGCTGTCATAAACATTATGTATGGAAATGAAGAAAAGAATAAGACAGTGCCTCATTCCAGTGATAGTGATGAGCAAGAGAAATTAGGTGTTACTGAAAAAAAGAATGGAGATGGTGAAGGGTTTATAGTTGTCTCGAAGAGGAGGAAAAACAGGCAGAAGATCACAAATGGAGTCACAGAATTGTACAACCAACAGTCCATTTGTGCTTCAGTTCGTTGA 5202 0.3891 MPPRSGKGKSNKAKAEKKKKEEKAAAAPSLVDITVVTPYDTQIVLKGISTDKILDVRKLLAVKVETCHFTNYSLSHETKGQRLNDRVEVVTLKPCLLRMVEEDYTDEAQAIAHVRRVLDIVACTTRFGRPKRSVASSESRPKKNGKAQHQNQTSLSPPGTPNGESRVGSPSSEAPPSAILDNVGMKAIHPTPKLSDFYEFFSFSHLSPPILHLKRCEVKDEEDRRKGDYFQLQVKICNGKVIEVVGSEKGFYTVGKQSLHSHTLVDLLQQLSRAFATAYESLMKAFLERNKFGNLPYGFRANTWLVPPSVAESPSIFPALPAEDENWGGNGGGQGRNGEFELRPWATDFAILASLPCKTEEERVVRDRKAFLLHSQFVDTSIFKGVAAIQHAMESKLNTKNELNSYPDSVLHEDHVGDLSIIVKRDIQDGNAKYNSLLDESSMHKVDAQKNLLKGLTADESVIVHDMSSLAVVVVHHCGYTATVKVVGNVNTRKPKVRDIEIDDQPDGGANALNINSLRVLLHKSGAESLEGTLSSLSNSNDLDASKVLVRKVVQECMEKIKEEPSASERSIRWELGSCWIQHLQKQETSTDNSSKNKEDGNDLEQAVKGLGKQFKFLKRREKKSNNLDGADSREQNDSRLANMNDVADKVEPNNDDLSNSNELEKLLSEEAFLRLKESGTGLHTKSVDELISMAHKFYDEVALPKLAMDFGSLELSPVDGRTLTDFMHLRGLQMRSLGKVVKLAENLPHIQSLCIHEMITRAFKHLLKAVTASVDNVADLSAAIASTLNFLLGGSRTEDGADQILIDDHNLRIQWLHLFLSKRFGWTLNDEFQHLRKLSILRGLCHKVSASRRLVLFFLDEVFINCTCFYSQVGLELFPRDYDMESSKPFGKNDIISLVPVCKHVGCSSLDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMAVCGPFHQNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEAMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMDAFSLSMQHEQTTLKILQAKLGSEDLRTQDAAAWLEYFESKAIEQQEATKNGTPKPDASIASKGHLSVSDLLDFISPNPKGNDARRKQRRTKILSTSDNNSQEHDEAIADETILFDNSKDALSMIQGKIEETNGKLDSQVQKQNGDFTGYRPVTSEPVYEASSDEGWQEANSKGRSGNAANRKFGHKKRHHLSKLSINGSNNYIYREGSSRNEITSPPQRGVPKVMLDMSSPSRQSKSRNLTLNEDSVNHSTKASVSKISSPASLSSLASKSISYKEVALAPPGTVLKPLLEKADMERVNAGDEICCNPAVTSISEGSCQSSITNTVCQHDETEETHENEPQQESSGSELEKVSDQAKSTAETNGSKLSAAAKPFNPGMLSMSHHLNSASFTSMYDTDVSQGMHVETVLPPAVARVPCGPRSPLYYRTNYTFRMKHGSTKGQTSIRERSGFGSPRIMNPHAPEFVPRNASQIEANDANSNVSNEHNSLSDIGMSEENKLDENFVEINGSSNKNSISESEKSEIARQILLSFLVKSVKENIDSVDESKDGEGKIEILESCSDEIAKDSAVINIMYGNEEKNKTVPHSSDSDEQEKLGVTEKKNGDGEGFIVVSKRRKNRQKITNGVTELYNQQSICASVR 1733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00268 1733 SUPERFAMILY TPR-like 920 1024 IPR011990 GO:0005515
Gma07g00268 1733 Gene3D Tetratricopeptide repeat domain 914 1158 IPR011990 GO:0005515
Gma07g00268 1733 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 849 IPR027523 GO:0006996
Gma07g00268 1733 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 872 1730 IPR027523 GO:0006996
Gma07g00268 1733 MobiDBLite consensus disorder prediction 1440 1464 - -
Gma07g00268 1733 ProSiteProfiles TPR repeat profile. 955 988 IPR019734 GO:0005515
Gma07g00268 1733 MobiDBLite consensus disorder prediction 146 176 - -
Gma07g00268 1733 CDD CLU-central 718 849 IPR033646 -
Gma07g00268 1733 SMART tpr_5 1039 1072 IPR019734 GO:0005515
Gma07g00268 1733 SMART tpr_5 955 988 IPR019734 GO:0005515
Gma07g00268 1733 SMART tpr_5 997 1030 IPR019734 GO:0005515
Gma07g00268 1733 MobiDBLite consensus disorder prediction 1675 1698 - -
Gma07g00268 1733 Pfam Mitochondrial function, CLU-N-term 50 121 IPR028275 -
Gma07g00268 1733 SUPERFAMILY Hypothetical protein c14orf129, hspc210 226 292 IPR023231 -
Gma07g00268 1733 MobiDBLite consensus disorder prediction 131 178 - -
Gma07g00268 1733 ProSiteProfiles Clueless (Clu) domain profile. 323 595 IPR025697 -
Gma07g00268 1733 MobiDBLite consensus disorder prediction 1424 1466 - -
Gma07g00268 1733 MobiDBLite consensus disorder prediction 1168 1200 - -
Gma07g00268 1733 MobiDBLite consensus disorder prediction 1302 1357 - -
Gma07g00268 1733 SUPERFAMILY TPR-like 992 1116 IPR011990 GO:0005515
Gma07g00268 1733 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 872 1730 - -
Gma07g00268 1733 MobiDBLite consensus disorder prediction 1227 1244 - -
Gma07g00268 1733 MobiDBLite consensus disorder prediction 1670 1698 - -
Gma07g00268 1733 MobiDBLite consensus disorder prediction 1 24 - -
Gma07g00268 1733 Pfam Translation initiation factor eIF3 subunit 135 716 850 IPR033646 -
Gma07g00268 1733 MobiDBLite consensus disorder prediction 1323 1357 - -
Gma07g00268 1733 Pfam Tetratricopeptide repeat 954 1024 - -
Gma07g00268 1733 Pfam Tetratricopeptide repeat 1038 1112 - -
Gma07g00268 1733 MobiDBLite consensus disorder prediction 1227 1285 - -
Gma07g00268 1733 MobiDBLite consensus disorder prediction 1424 1439 - -
Gma07g00268 1733 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00268 Gma-Chr7 2355490 2366016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00268 K03255 - gmx:100784276 3265.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00268 07 2355490 2366016 Gma07g00268 07 2355490 2366016 ECH
Gma07g00268 07 2355490 2366016 Gma08g01962 08 17576222 17586867 GST