Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00100 ATGGAGTTCCCAGACACGCGTTTGTCTCTGAGATCGAGCTTGACGTTCGGAGAGACGCTGTGCTCGGTGTTCATTCCGCTCATAGGAATAGTCGAAGCTTTGGTTTTCACATTCGCCAGTTGCTTCGATTTCCAATCTCCCAAGAAGAATAAGAAACATTCTTCTACCTTCGATGACATTCTCACCCTCGCCGAGGATTCTCCATTTAGTGTTAATGAAATCGAGGCGTTGCATGAGTTGTTCAAGAAGTTGAGTAGTTCTATCATTGATGATGGCCTCATCCACAAGGAAGAGCTCGCATTGGCACTGTTGAAGACCACCACTGGCGAGAATCTTTTCCTTGACAGGGTGTTTGATGTCTTCGATGAAAAAAGAAACGGCATTATAGAATTCGAGGAGTTTGTGCATGCTCTCAGTATCTTTCATCCTTGCACTCCTCTGGAAAAAAAAATTGATTTTGCTTTTAGATTGTATGACTTGAGACAGACCGGATATATTGAGCGAGAAGAAGTTAGGCAAATGGTTGTTGCCATTCTGTCAGAATATGGCATGGATCTGGATGAGGAAGTCCTTGATACCATTATTGATAAGGGACATCACCACACTGTTTAG 612 0.433 MEFPDTRLSLRSSLTFGETLCSVFIPLIGIVEALVFTFASCFDFQSPKKNKKHSSTFDDILTLAEDSPFSVNEIEALHELFKKLSSSIIDDGLIHKEELALALLKTTTGENLFLDRVFDVFDEKRNGIIEFEEFVHALSIFHPCTPLEKKIDFAFRLYDLRQTGYIEREEVRQMVVAILSEYGMDLDEEVLDTIIDKGHHHTV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00100 203 PRINTS Recoverin family signature 117 138 - -
Gma07g00100 203 PRINTS Recoverin family signature 164 182 - -
Gma07g00100 203 Gene3D - 60 199 - -
Gma07g00100 203 ProSiteProfiles EF-hand calcium-binding domain profile. 109 144 IPR002048 GO:0005509
Gma07g00100 203 PANTHER CALCINEURIN B 4 199 IPR045198 GO:0005509|GO:0019722|GO:0019900
Gma07g00100 203 ProSiteProfiles EF-hand calcium-binding domain profile. 146 181 IPR002048 GO:0005509
Gma07g00100 203 SUPERFAMILY EF-hand 63 196 IPR011992 -
Gma07g00100 203 SMART efh_1 113 141 IPR002048 GO:0005509
Gma07g00100 203 SMART efh_1 150 178 IPR002048 GO:0005509
Gma07g00100 203 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 4 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00100 Gma-Chr7 843903 846980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00100 9 197 EF-hand Containing Proteins AT4G33000 63.158 2.19e-79 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00100 K06268 - gmx:100801943 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00100 07 843903 846980 Gma08g01790 08 15948724 15951649 GST