Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02483 ATGGCTTCTTCCACCATCACCTCCTCCTTCCTAACATCACCCCCTTCATCTCTCTTCAACAAATCATCATCCCCTTCCTTCCATGCCACCCCTACTCTCCGCCCCCTCGCGCCACGCGCCTCCATGTCCGCCTCAGCGCCGCCCTACGACTTCGGATCGTTCCGGTTCGATCCGATTAGAGAGTCGATTGTGTCGCGCGAGATGACCCGCAGGTACATGATCGACATGGTCACCCACGCCGACACCGACGTCGTCATCGTTGGCGCGGGCTCCGCGGGTCTCTCGTGCGCCTACGAGCTCTCCAAAAACCCCTCCATCAACATCGCCATTGTTGAGCAGTCCGTCAGCCCCGGCGGCGGCGCCTGGCTCGGCGGCCAACTCTTCTCCGCCATGGTAGTGCGTAAGCCCGCACACCTCTTCCTAGACGAGCTCAATGTGGAGTATGACGAACAAGACAACTATGTGGTGATCAAGCACGCAGCATTGTTCACATCCACCATCATGAGCAAGCTCTTGGCCAGGCCAAACGTGAAGCTCTTCAATGCCGTGGCGGCGGAGGACTTGATTGTGAAGAACGGGAGAGTTGGTGGGGTGGTGACCAACTGGGCCTTGGTTTCATTGAACCATGACACTCAATCCTGCATGGACCCCAATGTGATGGAGGCTAAGGTGGTGGTGAGTTCTTGTGGCCATGATGGACCCTTTGGAGCCACTGGGGTGAAGAGGCTCAAGAGCATTGGGTTAATTGATAGTGTGCCTGGGATGAAGGCACTTGACATGAACAAGGCTGAGGATGCCATTGTGAGGCTCACTAGGGAGGTTGTGCCTGGCATGATTGTTACTGGGATGGAAGTTGCTGAGATTGATGGTGCTCCAAGGATGGGTCCAACATTTGGAGCAATGATGATTTCAGGGCAAAAAGCAGCCCATCTGGCTTTGAGATCATTGGGACTTCCCAATGCTTTGGATTCAGTGGGAAACGTTCATCCTGAGCTTGTCCTAGCTGCTGCTGAATCCGCTGAAATTGCTGAGGCTTAA 1038 0.5511 MASSTITSSFLTSPPSSLFNKSSSPSFHATPTLRPLAPRASMSASAPPYDFGSFRFDPIRESIVSREMTRRYMIDMVTHADTDVVIVGAGSAGLSCAYELSKNPSINIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELNVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKNGRVGGVVTNWALVSLNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGLIDSVPGMKALDMNKAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRSLGLPNALDSVGNVHPELVLAAAESAEIAEA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02483 345 MobiDBLite consensus disorder prediction 1 24 - -
Gma06g02483 345 Pfam Thi4 family 65 298 - -
Gma06g02483 345 TIGRFAM TIGR00292: thiazole biosynthesis enzyme 61 315 IPR002922 -
Gma06g02483 345 Gene3D - 50 80 - -
Gma06g02483 345 PANTHER THIAMINE THIAZOLE SYNTHASE 1 345 - -
Gma06g02483 345 PANTHER THIAMINE THIAZOLE SYNTHASE, CHLOROPLASTIC 1 345 - -
Gma06g02483 345 Gene3D - 81 316 IPR036188 -
Gma06g02483 345 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 1 325 IPR027495 GO:0009228
Gma06g02483 345 SUPERFAMILY FAD/NAD(P)-binding domain 41 309 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02483 Gma-Chr6 47301820 47305939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02483 K03146 - gmx:547461 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02483 06 47301820 47305939 Gma12g01218 12 15910246 15913617 ECH
Gma06g02483 06 47301820 47305939 Gma06g02483 06 47301820 47305939 ECH