Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01745 ATGGGGGAGCACGTGGTTTTATCTGTTCTTGACTCTCTTATAGCACCTGCAACTTTGCAACCACAACATGATGGTGATGGTGATGCTTTAGGTTCACTCATTGAGGGTGCTACTCATGTTAATGATGTTGGGGAATGTGATACACTTgaagaagaagaagaagaagaagaagaagaagaCCTTATCAAAATGGTGGAATGTCGCATTTGCCAGGAGGATGATACCCTTCAAAATTTGGACATACCCTGTGCTTGCAGTGGAACTTTGAAGTTTGCTCATACGAAATGTGTTCAAATATGGTGCTACGAGAAGGGTGATACAATTTGTGAGATCTGCAATCAGCCATTCAAACCTGGTTATACTGCAAATTCACCTGTCTGCCATCCTGGAGATACTTCAATTGATATCAGTGATGACTGGGCAACCACTAGGAATCCTTTAGATTTGCACAATGCTCGACTTTTGGCTATTGCAGCTGTGGACTACCAAGTTCCAGAGACTGAGCACGAAGATTATGTCAATGCTGGCACTGGTGGAACCACATTGTGGCACTCTGTTGGTCTAATTTTAATGGCTCTTTTACTTCTGAGGCATGCTGCTCCCCTCTTCAATGCTGATGTGGAGAAAGCTATAGCATATTTTTATTTTTTCTTTCTTGGCGCGGCTGCTGTTATCCTTCCATGCTATCTTGTGGCCTGGATAATTCGCATAATACAGCATCAAAGGCAAAGACAACAATCAGCTGAAGAACTTGCATTTATGCTACAGGCAGAGGAACAATAA 783 0.4112 MGEHVVLSVLDSLIAPATLQPQHDGDGDALGSLIEGATHVNDVGECDTLEEEEEEEEEEDLIKMVECRICQEDDTLQNLDIPCACSGTLKFAHTKCVQIWCYEKGDTICEICNQPFKPGYTANSPVCHPGDTSIDISDDWATTRNPLDLHNARLLAIAAVDYQVPETEHEDYVNAGTGGTTLWHSVGLILMALLLLRHAAPLFNADVEKAIAYFYFFFLGAAAVILPCYLVAWIIRIIQHQRQRQQSAEELAFMLQAEEQ 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01745 260 Pfam Protein of unknown function (DUF3675) 118 235 IPR022143 -
Gma06g01745 260 SMART ringv_2 66 113 IPR011016 GO:0008270
Gma06g01745 260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 125 IPR013083 -
Gma06g01745 260 ProSiteProfiles Zinc finger RING-CH-type profile. 59 119 IPR011016 GO:0008270
Gma06g01745 260 SUPERFAMILY RING/U-box 65 117 - -
Gma06g01745 260 CDD RING_CH-C4HC3_MARCH 67 113 - -
Gma06g01745 260 PANTHER OS11G0600700 PROTEIN 1 252 - -
Gma06g01745 260 Pfam RING-variant domain 67 112 IPR011016 GO:0008270
Gma06g01745 260 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 252 IPR033275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01745 Gma-Chr6 17718901 17723050 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01745 - - gmx:100795900 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01745 06 17718901 17723050 Gma04g01641 04 44629161 44632690 ECH
Gma06g01745 06 17718901 17723050 Gma06g01745 06 17718901 17723050 ECH