Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01714 ATGAGGATATTGTTGGAGGGAGAAAAAAGCCCTGAAGCTCCAGAACCCCGTTTTGGAATTAATTCGCTTCTCTTTAATCTAAATTCGTTGATTCTTTCCGTTGACATGTTGGAGGGTCCAACCTTTCTTGTTTCGAGGGACTTACCGAGCTCATGTGAGCAAGAGACCAGGTGGATTTACAATTCCTTCTGTGTGATGGAGCTCGCGAGCAATAAGCGTCAACTGGAACTAGAGGAAGAAGCTGTGCTGACAAAGTCATGCAAGCTTTCAGATGCTCCAGAGGAAGGAGAAACGAAGATGAACTTCCAAAATCTTTCCCTATCAGTCAACCAAGCAAATGATCAAAACCATTCAAGTGATCAGTCTGACTCAAGTTCACTTATCTTCCAACTTGGTCGGGACATCTCAATTAATTGTCTCCTACGATGCTCAAGGTCTGACTATGGTTCGATTGCCTCATTGAACCAAAGTTTTCGATCTCTTGTCCGAACTGGAGAGCTTTATAGGCTGAGGCGACAGATGGGTATCATAGAGCATTGGGTTTACTTCTCTTGTAATCTCCCTGAATGGGAGGCATTCGATCCAAACACCCGTCGATGGATGCGCTTGCCTAGAATGCCCTCTAATGAATGCTTTATCTGTTCAGATAAGGAGTCATTGGCTGTTGGTACGGAGCTTCTTGTCTTTGGAAAGGAAATAATGTCTCCTGTCATATACAGATATAGCATTTTGATGAATGCGTGGTCATCTGGTATGATAATGAATGTTCCTAGATGCTTGTTTGGTTCTGCCAGCCTTGGAGAAGTTGCCATATTAGCCGGAGGTTGTGATCCACGTGGCAACATCTTGAGCTCAGCTGAGCTTTATAACTCAGAAACTGGAACGTGGGAGCTTCTCCCAAACATGAATAAAGCAAGGAAAATGTGTTCTGGTGTATTTATAGATGGGAAATTTTATGTCATTGGTGGGATTGGAGTAGGTAACTCAAAGCAGCTAACATGTGGTGAGGAGTTTGATCTGCAGACAAGAAAATGGCGAGAAATACCCAACATGTTCCCCAGGCGACATGGAGGAACTGAGGCGACTGAGGTATCGGCTGCTGCCGAGGCACCTCCTTTGGTTGCAGTTGTAAATAATGTATTGTATTCTGCTGATTATGCCCAACAAGAGGTAAGGAGATATGATAAAGACAATAATTTGTGGTTCACTATTGGAAGATTACCTGACCGAATAGTTTCAATGAATGGCTGGGGATTAGCTTTTCGCGCATGTGGAAATCGCCTAATTGTTATTGGTGGGCCAAGAGCTTTAGATGGAAGGGTAATTGAAATCAATGCTTGTGTCCCAGGTGAAGGTGTGCCAGAGTGGAACCTGCTTGCTAGCAGGCAATCGGGGAGCTTTGTGTATAACTGTGCAGTGATGGGATGCTGA 1431 0.4423 MRILLEGEKSPEAPEPRFGINSLLFNLNSLILSVDMLEGPTFLVSRDLPSSCEQETRWIYNSFCVMELASNKRQLELEEEAVLTKSCKLSDAPEEGETKMNFQNLSLSVNQANDQNHSSDQSDSSSLIFQLGRDISINCLLRCSRSDYGSIASLNQSFRSLVRTGELYRLRRQMGIIEHWVYFSCNLPEWEAFDPNTRRWMRLPRMPSNECFICSDKESLAVGTELLVFGKEIMSPVIYRYSILMNAWSSGMIMNVPRCLFGSASLGEVAILAGGCDPRGNILSSAELYNSETGTWELLPNMNKARKMCSGVFIDGKFYVIGGIGVGNSKQLTCGEEFDLQTRKWREIPNMFPRRHGGTEATEVSAAAEAPPLVAVVNNVLYSADYAQQEVRRYDKDNNLWFTIGRLPDRIVSMNGWGLAFRACGNRLIVIGGPRALDGRVIEINACVPGEGVPEWNLLASRQSGSFVYNCAVMGC 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01714 476 Gene3D - 169 448 IPR015915 GO:0005515
Gma06g01714 476 Pfam Kelch motif 305 351 IPR006652 GO:0005515
Gma06g01714 476 Pfam Kelch motif 257 303 IPR006652 GO:0005515
Gma06g01714 476 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 45 476 - -
Gma06g01714 476 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 45 476 - -
Gma06g01714 476 SMART kelc_smart 317 366 IPR006652 GO:0005515
Gma06g01714 476 SMART kelc_smart 269 316 IPR006652 GO:0005515
Gma06g01714 476 SUPERFAMILY Kelch motif 185 472 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01714 Gma-Chr6 17361137 17363760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01714 125 350 EF-hand Containing Proteins AT4G39560 27.897 9.34e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01714 - - gmx:100788507 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01714 06 17361137 17363760 Gma04g01667 04 45278823 45281715 ECH
Gma06g01714 06 17361137 17363760 Gma06g01714 06 17361137 17363760 ECH