Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01667 ATGTTGGAGGGTCCAACCTTTCTTGTTTCGAGGGACATACTGAGCTCTTGTGAGCAAGAGACCAGGTGGATCTACAATTCCTTCTGTGTGATGGAGCTCGCGAGCAATAAGCGTCGACTGGAACTAGAGGAAGAAGCCGTGTTGACAAAGTCATGCAAGCTTTCAGATGCTCCGGAGAAAGGGGAAACAAAGAAGAGCATCCAAGATCTTTCCCTATCAGTCAACCAAGCAAATGCTCAAAACCATTCAAGTGATCAGTCTGACTCAAGTTCACTTATCTTCCAACTTGGTCGGGACATCTCAATTAATTGTCTCCTACGATGCTCAAGGTCTGACTATGGTTCGGTTGCCTCATTGAACCAAAGTTTTCGATCTCTCATCCGAACTGGAGAGCTTTATAGGCTGAGGCGACAGATGAGTATCATAGAGCATTGGGTTTACTTCTCTTGTAATCTCCCTGAATGGGAGGCATTTGATCCAAACACCCGTCGATGGATGCGCTTGCCTAGAATGCCCTCTAATGAATGCTTTATATGTTCAGATAAGGAGTCCTTGGCTGTTGGTACGGAGCTTCTTGTCTTTGGAAAGGAAATAATGTCTCCTGTCATATACAGATATAGCATTTTAATGAATGCATGGTCATCTGGTATGGAAATGAACATTCCTAGATGCTTGTTCGGTTCTGCCAGCCTTGGAGAAATTGCCATATTAGCTGGTGGTTGTGATCCTCGTGGAAACATCTTGAGCTCAGCTGAGCTTTATAACTCAGAAACTGGAACGTGGGAGCTTCTCCCAAACATGAATAAAGCAAGGAAAATGTGTTCTGGTGTATTTATAGATGGGAAATTTTATGTCATTGGCGGGATTGGAGTAGGTAATTCAAAGCAGCTAACATGTGGTGAGGAGTTTGATCTGCAGACAAGAAAATGGCAAAAAATACCTAACATGTTCCCTGGGCGAAATGGAGGAACTGAGGCGACTGAGGTATCATCTGCTGCTGAGGCACCTCCTTTGGTTGCAGTTGTAAATAATGTATTGTATTCTGCAGATTATGCCCAACAAGAGGTAAGGAGATATGATAAAGACAATAATTTGTGGGTCACTATTGGAAGATTACCTGACCGAATAGTCTCAATGAATGGCTGGGGGTTAGCCTTTCGTGCATGTGGAAATCGCCTAATTGTTATTGGTGGGCCAAGAGCTTTAGATGGAAGGGTAATTGAGATCAATGCTTGTGTCCCAGGTGAAGGTGTGCCAGAGTGGAACCTGCTTGCTAGCAGGCAATCAGGGAGCTTTGTGTATAACTGTGCAGTGATGGGATGCTGA 1326 0.4427 MLEGPTFLVSRDILSSCEQETRWIYNSFCVMELASNKRRLELEEEAVLTKSCKLSDAPEKGETKKSIQDLSLSVNQANAQNHSSDQSDSSSLIFQLGRDISINCLLRCSRSDYGSVASLNQSFRSLIRTGELYRLRRQMSIIEHWVYFSCNLPEWEAFDPNTRRWMRLPRMPSNECFICSDKESLAVGTELLVFGKEIMSPVIYRYSILMNAWSSGMEMNIPRCLFGSASLGEIAILAGGCDPRGNILSSAELYNSETGTWELLPNMNKARKMCSGVFIDGKFYVIGGIGVGNSKQLTCGEEFDLQTRKWQKIPNMFPGRNGGTEATEVSSAAEAPPLVAVVNNVLYSADYAQQEVRRYDKDNNLWVTIGRLPDRIVSMNGWGLAFRACGNRLIVIGGPRALDGRVIEINACVPGEGVPEWNLLASRQSGSFVYNCAVMGC 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01667 441 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 441 - -
Gma04g01667 441 Gene3D - 132 413 IPR015915 GO:0005515
Gma04g01667 441 SUPERFAMILY Kelch motif 150 437 IPR015915 GO:0005515
Gma04g01667 441 Pfam Kelch motif 270 316 IPR006652 GO:0005515
Gma04g01667 441 Pfam Kelch motif 222 268 IPR006652 GO:0005515
Gma04g01667 441 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 441 - -
Gma04g01667 441 SMART kelc_smart 234 281 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01667 Gma-Chr4 45278823 45281715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01667 90 315 EF-hand Containing Proteins AT4G39560 26.957 2.20e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01667 - - gmx:100813260 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01714 06 17361137 17363760 Gma04g01667 04 45278823 45281715 ECH
Gma04g01667 04 45278823 45281715 Gma04g01667 04 45278823 45281715 ECH