Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01604 ATGGCGTCAATCTGCGACACCGATATCCCTCTTCGACTACAGAACATCGACGCTCTCACCGCTTCTTACAGAAACTCTCTCCAATCACTGAGAACCACCGCACTCGAAACCGCGCGATCTCAATCCGAACTAACAGAGATTCAAGCTAAACTCAGAGAGGCTGAGGATGATTTGTGTTTTGGTTTGGTGTTGTGTTTTACTTTTCGTGCAGTTAAGACTCGGAGAGAGGCGAAGCGAATGGCGTTGAAAGCCGCGATTGATTCTGTGAAGGGAAGAATTGAAGATCTGAAGACGAGTATTCCGCAGCAGAGAACAAAAAACAAGGAATGTGCTACCGTTGTATCGCAGCACCGGCTTGGAGGCCATATCTTGGTACACAATAGGATCCTTGGTTTTCATGTTGAAGGTGGACGTGGGGTAAAATTCACCTTCAAGAATATTAATGTGGACAACCCAAATGAGGAGTTCTTTTTTACCATCCGCCTTGAAGATGACATTTATACATTGCTAAATTGTAAACCATCTGTCAAAGATACTGACGAGGTGATCCATGAATTAAACAAGACAAATGGTCTATTTAAATTTGTCAGAACAATGAGGAAAAAGTTTCAAGAAGCAGTGGCACAAGGCAGTCTATCTATGACAACAAATGAACATCAAGAATCTGCCTTTATGTCTGCATCTGCTCCAGTTTTATCAATATCAACCATTACTGAAGGAAATGAGAATCAAGATGAACCCATCAAAGGCAATGCACATCTCCAGAAACAAGTCAATCGAAGAAGGGTAAAATCTCCTGGATCTGCATCATCTGTTTGTCAATCTCCTCGTTTGAAGGTGTCAACTCAAATACTCAAGCTGTATCAGAAAGtgagtttagGTCAGGAAATGAAGCGGTGTGGGGGATGCTCACCTGCTCGGTACCTCATTTTGATGAGACATGCTGGTTCGTGTAGGGCATTAATTGCTAACAAATTGACATGTAAATTAAGACATACCCAGGTTCTGGATGTCTGA 1017 0.4218 MASICDTDIPLRLQNIDALTASYRNSLQSLRTTALETARSQSELTEIQAKLREAEDDLCFGLVLCFTFRAVKTRREAKRMALKAAIDSVKGRIEDLKTSIPQQRTKNKECATVVSQHRLGGHILVHNRILGFHVEGGRGVKFTFKNINVDNPNEEFFFTIRLEDDIYTLLNCKPSVKDTDEVIHELNKTNGLFKFVRTMRKKFQEAVAQGSLSMTTNEHQESAFMSASAPVLSISTITEGNENQDEPIKGNAHLQKQVNRRRVKSPGSASSVCQSPRLKVSTQILKLYQKVSLGQEMKRCGGCSPARYLILMRHAGSCRALIANKLTCKLRHTQVLDV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01604 338 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 5 227 IPR045143 GO:0007059|GO:0031262
Gma06g01604 338 PANTHER KINETOCHORE PROTEIN SPC25 5 227 - -
Gma06g01604 338 Gene3D Chromosome segregation protein Spc25 111 211 - -
Gma06g01604 338 Coils Coil 37 57 - -
Gma06g01604 338 Pfam Chromosome segregation protein Spc25 137 204 IPR013255 GO:0007059|GO:0031262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01604 Gma-Chr6 15635254 15640117 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01604 K11550 - gmx:100804876 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01604 06 15635254 15640117 Gma06g01604 06 15635254 15640117 ECH
Gma04g01803 04 48078151 48084845 Gma06g01604 06 15635254 15640117 GST
Gma17g00817 17 6851966 6858378 Gma06g01604 06 15635254 15640117 PCT
Gma05g00382 05 3570119 3574204 Gma06g01604 06 15635254 15640117 PCT
Gma06g01604 06 15635254 15640117 Gma17g00817 17 6851966 6858378 PCT
Gma06g01604 06 15635254 15640117 Gma05g00382 05 3570119 3574204 PCT