Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01803 ATGGCATCAATTTGCGACAAAGATATCCCTCTTCGACTACACAACATCGACGCTTTCATCGCTTCTTACAGAAACTCCCTCCACTCGCTCAGAGCCACCGCACTCGAAGCCGCGCGATCTCAATCCGAATTAGCCGAGGTTAAAGCTAAACTGCGAGAGGCTGAGGATGAATTGGTAAAGGCACTTGCAGTTAAGACTCGGAGAGAGGCGAAGCGAATGGCCTTGAAAGAGGCGATTGTTTCTGTGAAGGGAAGAATTGAGGATCTGAAGACGAGTATTCAGAAGCAGAGAACCCAAAACGAGGAATGTGCCACGGTTGTGTCGCATCACCGTCTTGTTTTGGAAGTGTCTGAACAGAAATCAAATGAAAGCAGTGAACATAGAGATGAAGTCCAGGAGGCCATATCTTGGTACAATAGGATCCTTGGTTTTCAGATTGAAGGTGGACGTGGGGTAAAATTCAGCTTCAAGAATATTAATGTGGACAACCCAAATGAGGAGTTCTTTTTTACCATCCGCCACGAAGATGACGTGTATACATTGCTAAATTGTAAACCATCTGTCAAAGATACTGACGAGTTGATCCATGAATTAAACAACACAAATGGGCTATTTAAATTTGTCAGAACAATGAGGAAAAAGTTTCAAGAAGTAGTGGCACAAGGCCGTTTATCTATGACAACAAATGAACATCAAGAATCTGCCTTTATCTCTGCATCTGGTCCAGTTTTATCAATATCAACCATTACTGAAGATAATGATCATCAAGATGAACCCACCAAAGGTAATGCACATCTCCAGAAACAAGTTAATCGAAGAAGGGTAAAATCAGCAATTCTATCTCCTGGATCTGCATCATCTGTCCGTCAATCTCCTCGTTTGAAGGTCAGGAAATGA 897 0.4259 MASICDKDIPLRLHNIDAFIASYRNSLHSLRATALEAARSQSELAEVKAKLREAEDELVKALAVKTRREAKRMALKEAIVSVKGRIEDLKTSIQKQRTQNEECATVVSHHRLVLEVSEQKSNESSEHRDEVQEAISWYNRILGFQIEGGRGVKFSFKNINVDNPNEEFFFTIRHEDDVYTLLNCKPSVKDTDELIHELNNTNGLFKFVRTMRKKFQEVVAQGRLSMTTNEHQESAFISASGPVLSISTITEDNDHQDEPTKGNAHLQKQVNRRRVKSAILSPGSASSVRQSPRLKVRK 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01803 298 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 5 272 IPR045143 GO:0007059|GO:0031262
Gma04g01803 298 Pfam Chromosome segregation protein Spc25 149 216 IPR013255 GO:0007059|GO:0031262
Gma04g01803 298 Coils Coil 37 64 - -
Gma04g01803 298 MobiDBLite consensus disorder prediction 252 298 - -
Gma04g01803 298 Gene3D Chromosome segregation protein Spc25 123 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01803 Gma-Chr4 48078151 48084845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01803 K11550 - gmx:100804876 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01803 04 48078151 48084845 Gma04g01803 04 48078151 48084845 ECH
Gma04g01803 04 48078151 48084845 Gma06g01604 06 15635254 15640117 GST
Gma17g00817 17 6851966 6858378 Gma04g01803 04 48078151 48084845 PCT
Gma05g00382 05 3570119 3574204 Gma04g01803 04 48078151 48084845 PCT
Gma04g01803 04 48078151 48084845 Gma17g00817 17 6851966 6858378 PCT
Gma04g01803 04 48078151 48084845 Gma05g00382 05 3570119 3574204 PCT