Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01587 ATGTTGAGGCTTTACGTGTGTGTATTGGAAACCAAGGACCTACCCGTGAAGGATACCTACGTGACGCTAAGGCTCGGAAAGTTGAAGTGCAAGACAAGGATACTGAGGAACACGTGGAACCCCGTTTGGAACGAGGAGTTTGGTTTCAAGGTGCATGGTGCTGAAGACGTGCTTGTTGTCTCTGTTGTTGTTAATCATGATAATAATAATAAGTGCAGATCAGTGACCAATGGTTCTGTAGTGGAGTTTGTGGGTGAGGTACGGATTCCGGTTGGTTCGGTTGCTTTTGAGGATAAGCAAACGTTGCTGCCCACGTGGTTCTCTCTTGAAAGCCCCAAGAGTGGGAGGTTTTTCAATAAATATTGTGGGAAAATTCTCCTTACTGTGTCTCTTCATGGTAAAGGCCGCTCTTTTATGAATCATAAGCATTCTCCAAATTCAACTATTGCAGTTGAGAACTCAAGAGACTTGGAAGGTCTGCACTTTTTATGTCAGTCACATTGTGATAAAATGGGTGTAGGCAAACAATTGTTGAAGGATATTGCTAATGGTCTGCATAGGATTTTCAAAAAGAAAGAGGGAAACTCAAATTTTGGGGATTCTTCAGAACTATCCTCTTCATTATCTGATTATGAAGATAGTGTACACGAAAATACGTTTCCTTGTAGCTTTGAAGAATCCATTGCACTGATGGAATCAAGAGATGACAACAAACCAGAAATGCCTGAAAATTTGCCCGTCGGTATTCTAGTAGATCAGATTTATTTAGTCTCTCCGAATGACCTTAATGTGTTTCTTTTTGCACCCAATTCACAGTTTAGTAAAGATATGGCTGAACTGCAGGGAACAACAAATGTGCAAGAGGGGCCTTGGACATGGAAAAATGGAGACACATCATGTTTAACACGAGTTGTTACCTATATGAAAGCGGCTACAAAATTGATTAAGGCAGTTAATGCCATTGAGGAGCAAACCTACATTAGAGTGAGTAGAAAGGAATTTGCTATACTGGTTAGTGTAAGCACACCTGAGGTCCCATATGGGAATTCCTTTAGGATTGAATTACTTTACAAGATAATGCCAGGGGAGGTATCTTCTGGAGAGGAATCCTCCCATCTAGTTGTGTCTTGGGGAATTGTCTTCCTCCAAAGCACAATGATGAAAGGCATGATAGAAGGTGGGGCAAGACAAGGATTGAAGGAGAGTTTTAGCCAGTTCTCGGACCAACTTGCACGGAATTTTAAGGTGCTAGATAAGGCAGATTTACCAGACAAGGAACATTTGTTGGCAACTTTGCAAACAGAAGACCAGTGGTATTGGTGGCAGACAATTACATACTTTTGGAATTTCACTGTGGCTTCCACCATTTTCATGTTTTTATATGTGTTGGTGCATATTTTAAGGTGTGGTCCAAATCTGCTTCAGGGCTTGGAATTTAGTGGGCTTGAATTGCCAGATAGTTTTGGAGAGCTCATTACAAGTGGAATTTTAATCATCCAGTTGCAGCGTGTTTATAATATGGTGTCTCACTTTGTGCAAGCTAGATTTCAAATGGGAACTGACCATGGCCTCAAAGCTCATGGCGATGGATGGGTTCTTACTGTGGCTTTAATTGAGGGGGTTGACCTAGCCTCCTTGGAGTCAGAGGGATTGTCAGATCCCTATGTAGTTTTCACTTGTAATGGACAAACAAGGTCAAGCTCTGTGAAGCTTCAAACTTCTGATCCTCAATGGAATGAGATATTAGAGTTTGATGCTATGGAAGAACCACCATCAGTTCTACATGTGGAAGTTTTTGATTTTGATGGTCCATTTGACCAGGATGTTTCACTTGGACATGCTGAGATCAATTTTCTAAGACACACATCAACTGAGTTGGCAGACATGTGGGTCATGCTAGAAGGAAAGCTTGCCCAATCTTCTCAGTCAAAGTTGCACTTGAGAATTTTCTTGGATAACAATAATGGAGTTGAAACAATTAAGGAATATTTGGAGAAGATGGAAAAGGAAGTCGGCAAAAAATTGAATCTTAGATCACCTCAAAGGAATTCTACATTCCAGAAATTGTTTGCCTTGCCTCCGGAAGAATTTCTCATCAAAGATTTCACTTGTTACCTCAAGAGAAAAATGCCTTTGCAGGGTCGGCTGTTTCTTTCAGCAAGGATTCTGGGGTTTCATGCCAATTTGTTCGGACACAAAACCAAGTTTTTCTTCCTTTGGGAAGATATTGAAGAGATACAAGTGCTTCCTCCATCATTGGCAACATTAGGGAGCCCTACATTGGTCATAGTTCTGCGAAGAGGCCGAGGTCTCGACGCAAGGCATGGTGCAAAGACTCAAGATGAAGAAGGGAGACTTAGATTTCATTTTCAATCTTTTGTTTCATTTAGTGCTGCCTCCAGAGCAATAAAGGCCTTGTGGAGAACAAGAATACTGAACCCCTATCAGAAAGAACAAATTTCAGAAGAGCATGAAGATCAAGAAAGATTTGTAATCCCGGAAGACTCTGCATCTATCTTAGAGGATGAAGAAAAAATGTCCAGAATTTTCTCTGCAGAACTGCCAATCAAGATGAAATCAGTGATGGGAATTTTTGATGGAGGAAACCTGGAGCATAAAATTATGCAGAGAACAGGATGTACGAACTATGAAACAACATCATGGGAACAAGTAAAGCATGATGTCTTCGAGAGGCGTGTTTCTTACCAATTCAATCGACACGTGTCAGCTTTTGGTGGTGAAGTCACTTGCACACAACAAAAGTTTCCAAATGCAAACACTGGAGGTTGGACTGTGATTGAAGTTATGGATCTTCACGGTGTCCCATTTGCTGATCACTTCCATATTCATTTTAGGTATGAAATAGAGAAATCCTCTCTTGGTGACTGTGCTTGCAAGTGTGATGCTTACATTGGTATTATGTGGCTTAAGAGCTCGAAGTTTCAGCAGAGGATCAACAGGAACATAACTGCCAAGTTTAACCTTCGATTGAAGGAAATATTTGAACTGGTTCAGAAAGAGATTTTATTAATGTCTCAGAACTCTCATGGATAA 3054 0.4086 MLRLYVCVLETKDLPVKDTYVTLRLGKLKCKTRILRNTWNPVWNEEFGFKVHGAEDVLVVSVVVNHDNNNKCRSVTNGSVVEFVGEVRIPVGSVAFEDKQTLLPTWFSLESPKSGRFFNKYCGKILLTVSLHGKGRSFMNHKHSPNSTIAVENSRDLEGLHFLCQSHCDKMGVGKQLLKDIANGLHRIFKKKEGNSNFGDSSELSSSLSDYEDSVHENTFPCSFEESIALMESRDDNKPEMPENLPVGILVDQIYLVSPNDLNVFLFAPNSQFSKDMAELQGTTNVQEGPWTWKNGDTSCLTRVVTYMKAATKLIKAVNAIEEQTYIRVSRKEFAILVSVSTPEVPYGNSFRIELLYKIMPGEVSSGEESSHLVVSWGIVFLQSTMMKGMIEGGARQGLKESFSQFSDQLARNFKVLDKADLPDKEHLLATLQTEDQWYWWQTITYFWNFTVASTIFMFLYVLVHILRCGPNLLQGLEFSGLELPDSFGELITSGILIIQLQRVYNMVSHFVQARFQMGTDHGLKAHGDGWVLTVALIEGVDLASLESEGLSDPYVVFTCNGQTRSSSVKLQTSDPQWNEILEFDAMEEPPSVLHVEVFDFDGPFDQDVSLGHAEINFLRHTSTELADMWVMLEGKLAQSSQSKLHLRIFLDNNNGVETIKEYLEKMEKEVGKKLNLRSPQRNSTFQKLFALPPEEFLIKDFTCYLKRKMPLQGRLFLSARILGFHANLFGHKTKFFFLWEDIEEIQVLPPSLATLGSPTLVIVLRRGRGLDARHGAKTQDEEGRLRFHFQSFVSFSAASRAIKALWRTRILNPYQKEQISEEHEDQERFVIPEDSASILEDEEKMSRIFSAELPIKMKSVMGIFDGGNLEHKIMQRTGCTNYETTSWEQVKHDVFERRVSYQFNRHVSAFGGEVTCTQQKFPNANTGGWTVIEVMDLHGVPFADHFHIHFRYEIEKSSLGDCACKCDAYIGIMWLKSSKFQQRINRNITAKFNLRLKEIFELVQKEILLMSQNSHG 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01587 1017 ProSiteProfiles VASt domain profile. 845 1008 IPR031968 -
Gma06g01587 1017 CDD C2 533 633 - -
Gma06g01587 1017 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 140 IPR035892 -
Gma06g01587 1017 Gene3D - 682 809 IPR011993 -
Gma06g01587 1017 Pfam C2 domain 3 109 IPR000008 -
Gma06g01587 1017 Pfam C2 domain 532 631 IPR000008 -
Gma06g01587 1017 Gene3D C2 domain 2 133 IPR035892 -
Gma06g01587 1017 ProSiteProfiles VASt domain profile. 246 418 IPR031968 -
Gma06g01587 1017 PANTHER BNAA05G37250D PROTEIN 2 1014 IPR044511 -
Gma06g01587 1017 PANTHER C2 AND GRAM DOMAIN-CONTAINING PROTEIN 2 1014 - -
Gma06g01587 1017 Gene3D C2 domain 515 651 IPR035892 -
Gma06g01587 1017 ProSiteProfiles C2 domain profile. 512 631 IPR000008 -
Gma06g01587 1017 SMART gram2001c 684 750 IPR004182 -
Gma06g01587 1017 Pfam VAD1 Analog of StAR-related lipid transfer domain 849 989 IPR031968 -
Gma06g01587 1017 Pfam VAD1 Analog of StAR-related lipid transfer domain 250 398 IPR031968 -
Gma06g01587 1017 CDD C2 4 109 - -
Gma06g01587 1017 Pfam GRAM domain 686 766 IPR004182 -
Gma06g01587 1017 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Gma06g01587 1017 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 531 656 IPR035892 -
Gma06g01587 1017 SMART C2_3c 532 631 IPR000008 -
Gma06g01587 1017 SMART C2_3c 3 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01587 Gma-Chr6 15416862 15421894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01587 1 153 Lipid Metabolism Gene Families AT1G22610 30.247 1.21e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01587 - - gmx:100817914 2030.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01587 06 15416862 15421894 Gma06g01587 06 15416862 15421894 ECH
Gma04g01822 04 48323357 48328833 Gma06g01587 06 15416862 15421894 GST