Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01822 ATGCTTATCCTATATTACCCGCTACAAAACCGTTTTGGCACCGCTACCACAAAACACAGACTATTTGATAACTCATTGGGGATTTATCAAACATTTTTCTTATGCATTAATAGCGTTAAGAGTTGTAAAGAGCTAGTTTTATTACAAGCTATGTTGAGACTTTACGTGTGTGTATTGGAAGCCAAGGACCTTCCCGTGAAGGATACTTACGTGAAGCTTAGGCTGGGAAAGTTCAAGTGCAGGACAAGGATATTGAGGAACACAAGCAACCCCGTTTGGAACAAGGAGTTTGGTTTCAATGTGCATGGTGCTGAAGACATGCTTGTTGTCTCTGTTGTTAATCATGATAATATTAATGAGTGCAGAGTGACCAATGGTTCTGTGGAGTTTGTGGGTGAGGTACGGATTCCGGTAGGTTCGGTTGCTTTTGAGGATAAGCAAACGTTTTTGCCCACGTGGTTCTCTCTTGAAAGCCCCAAGAGTGGGAAGTTTTTCAATGAATATTGTGGGAAAATTCTCCTTACCGTTTCTCTTCATGGTAAAGGTCGTTCTTCTTTTATCAATCATAAGCATTCTTCAAATTCAACTATTGCGGTTGACAACTCAAGAGACTTGGAAGGTCTGCACGTTGCGTGTCAGGTACCTTGTGATAAAATGGGTGCAGGCAAACAATTGTTGAAGGCTATTGCTAATGGTCTGCATAGGATTTTCAAAAAGAAAGAAGAAAACTCAAAATCTGGTGATTCTTCAGAACTATCTACTTCATTATCTGATTATGAAGATAGTGTACAGGAAAATTCATCTCCTTGTAGCTTTGAAGAAGCCATTGCACTAATGGAATCAGGAGATGACAAACCAGAAATGCCTGAAAATTTGCCTGGCGGTGTTCTAGTAGATCAGATTTATTTAGTCTCTCCGAATGACCTTAATGTGTTTCTTTTTGCACCCAATTCACAGTTTAGTAAAGATATGGTTGAACTGCAGGGAACAACAAATGTGCAAGAGGGACCTTGGACATGGAAAAATGGAGACATGTCGTGTTTAACACGAGTTGTTACCTATACAAAAGCGGCTACGAAATTGATTAAGGCAGTTAATGCAATTGAGGAGCAAACCTACATTAGAGTGAGCAGAAAGGAATTTGCTATACTTGTTAGTGTAAGCACACCAGAGGTCCCATATGGAAATTCATTTAGGATTGAATTGCTTTACAAGATAATGCCAGGGGAGGCATCTTCAGGAGAGGAATCCTCCCATCTAGTTGTGTCTTGGGGAATTGTCTTCCTCCAAAGCACAATGATGAAAGGCATGATAGAAGGTGGGGCAAGACAGGGATTGAAGGAGAGTTTGGTCCAGTTCTCGGACCAACTTGCGCTGAATTTTAAGGTGCTAGATAAAGCAGATTTACCAGACAAGGAACATTTGTTGGCAACTTTGCAAACTGAAGACCAGTGGAATTGGTGGCAGACAATTACATACTTTTGGAATTTCACTGTGGCTTCCACCATTTTCATGTTTTTGTATGTGTTGGTGCATATTTTAAGGTGTGGTCCAAGTCTACCTCAGGGCTTGGAATTTAGTGGGCTTGAATTGCCAGATAGTTTTGGGGAGCTCATTACAAGTGGAATTTTAATCATCCAGTTGCAGCGTGTTTATAATATGGTGTCTCACTTTGTGCAAGCTAGATTTCAAATGGGAACTGACCATGGCCTCAAAGCCAATGGTGATGGATGGGTTCTTACTGTGGCTTTAATTGAGGGGGTTGACCTGGCCTCCTTGGAGTCCGAAGGATTGTCAGATCCCTATGTAGTTTTCACCTGTAATGGACAAACAAGGTCAAGCTCTGTCAAGCTTCAAATGCCCGATCCTCTATGGAATGAGATATTAGAGTTTGATGCTATGGAAGAACCACCATCAGTTTTACATGTGGAAGTTTTTGATTTTGATGGTCCATTCGACCAGGATGTTTCACTTGGACATGCTGAGATCAATTTTCTAAAACACACATCAACTGAGTTGGCAGATATGTGGGTCATGCTTGAAGGAAAGCTTGCCCAATCTTCTCAGTCAAAGTTGCACTTGAGAATTTTCTTGGATAACAATAATGGAGTTGAAACAATCAAGGAATATTTGGAGAAGATGGAAAAGGAAGTAGGCAAAAAATTGAATCTTAGATCACCTCAAAGGAATTCTACATTCCAGAAATTGTTTGCTTTGCCTCCGGAAGAATTTCTCATCAAAGATTTCACTTGTTACCTCAAGAGAAAAATGCCTTTACAGGGTCGGTTGTTTCTTTCAGCAAGGATTCTGGGGTTTCATGCCAATTTGTTTGGACATAAAACCAAGTTTTTCTTCCTTTGGGAAGATATTGAAGAGATACAAGTGCTTCCTCCATCATTGGCAACATTAGGAAGCCCTACATTGGTCATAATTCTGCGAAGAGGTCGGGGTCTTGATGCAAGGCATGGTGCAAAGACTCAAGATGAAGAAGGGAGACTTAGATTTCATTTTCAATCATTTGTTTCATTTAGTGCTGCCTCCAGAACAATAAAGGCCTTGTGGAGGACAAGAATACTGAACCCCTATCAGAAAGAACAAATTTCAGAAGAGCATGAAGATCAAGAAAGCTTTGTAATTCTGGAAGACTCTGCATCTATCTTAGAGGATGAAGAAAAAATGTCCAGAATTTTCTCTGCAGAACTTCCAATTAAGATGAAATCAGTGATGGGAATATTTGATGGAGGAAACCTGGAGCATAAAATTATGCAGAGAACAGGATGTATGAACTATGAAACAACATCATGGGAACAAGTAAAGCCTGATTTCTTCGAGAGGCATGTTTCTTACCAATTCAATCGACATGTGTCAGTTTTTGGTGGTGAAGTCACATGCACACAACAAAAATTTCCAAATACAAACACTGGAGGTTGGACTGTGATTGAAGTTATGGCTCTTCACAGTGTCCCATTTGCTGATCACTTCCATATTCATTTTAGGTATGAAATTGAGAAATCCTCTCTTGGTGACTGTGCATGCAAGTGTGATGCTTACATTGGTATTATGTGGCTCAAGAGCTCTAAGTTTCAGCAGAGGATCAACAGGAACATAACAGCCAAGTTTAACCTCCGATTGAAGGAAATATTTGAACTGGTTCAGAAAGAGATTTTGTTAATGTCTCAGAACTCTCACGGATAA 3195 0.4016 MLILYYPLQNRFGTATTKHRLFDNSLGIYQTFFLCINSVKSCKELVLLQAMLRLYVCVLEAKDLPVKDTYVKLRLGKFKCRTRILRNTSNPVWNKEFGFNVHGAEDMLVVSVVNHDNINECRVTNGSVEFVGEVRIPVGSVAFEDKQTFLPTWFSLESPKSGKFFNEYCGKILLTVSLHGKGRSSFINHKHSSNSTIAVDNSRDLEGLHVACQVPCDKMGAGKQLLKAIANGLHRIFKKKEENSKSGDSSELSTSLSDYEDSVQENSSPCSFEEAIALMESGDDKPEMPENLPGGVLVDQIYLVSPNDLNVFLFAPNSQFSKDMVELQGTTNVQEGPWTWKNGDMSCLTRVVTYTKAATKLIKAVNAIEEQTYIRVSRKEFAILVSVSTPEVPYGNSFRIELLYKIMPGEASSGEESSHLVVSWGIVFLQSTMMKGMIEGGARQGLKESLVQFSDQLALNFKVLDKADLPDKEHLLATLQTEDQWNWWQTITYFWNFTVASTIFMFLYVLVHILRCGPSLPQGLEFSGLELPDSFGELITSGILIIQLQRVYNMVSHFVQARFQMGTDHGLKANGDGWVLTVALIEGVDLASLESEGLSDPYVVFTCNGQTRSSSVKLQMPDPLWNEILEFDAMEEPPSVLHVEVFDFDGPFDQDVSLGHAEINFLKHTSTELADMWVMLEGKLAQSSQSKLHLRIFLDNNNGVETIKEYLEKMEKEVGKKLNLRSPQRNSTFQKLFALPPEEFLIKDFTCYLKRKMPLQGRLFLSARILGFHANLFGHKTKFFFLWEDIEEIQVLPPSLATLGSPTLVIILRRGRGLDARHGAKTQDEEGRLRFHFQSFVSFSAASRTIKALWRTRILNPYQKEQISEEHEDQESFVILEDSASILEDEEKMSRIFSAELPIKMKSVMGIFDGGNLEHKIMQRTGCMNYETTSWEQVKPDFFERHVSYQFNRHVSVFGGEVTCTQQKFPNTNTGGWTVIEVMALHSVPFADHFHIHFRYEIEKSSLGDCACKCDAYIGIMWLKSSKFQQRINRNITAKFNLRLKEIFELVQKEILLMSQNSHG 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01822 1064 MobiDBLite consensus disorder prediction 241 267 - -
Gma04g01822 1064 Pfam GRAM domain 733 813 IPR004182 -
Gma04g01822 1064 Gene3D C2 domain 562 698 IPR035892 -
Gma04g01822 1064 PANTHER C2 AND GRAM DOMAIN-CONTAINING PROTEIN 52 1061 - -
Gma04g01822 1064 SMART gram2001c 731 797 IPR004182 -
Gma04g01822 1064 CDD C2 54 156 - -
Gma04g01822 1064 ProSiteProfiles C2 domain profile. 28 154 IPR000008 -
Gma04g01822 1064 Pfam C2 domain 53 156 IPR000008 -
Gma04g01822 1064 Pfam C2 domain 579 678 IPR000008 -
Gma04g01822 1064 CDD C2 580 680 - -
Gma04g01822 1064 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 181 IPR035892 -
Gma04g01822 1064 ProSiteProfiles VASt domain profile. 892 1055 IPR031968 -
Gma04g01822 1064 ProSiteProfiles C2 domain profile. 559 678 IPR000008 -
Gma04g01822 1064 Gene3D C2 domain 50 202 IPR035892 -
Gma04g01822 1064 PANTHER BNAA05G37250D PROTEIN 52 1061 IPR044511 -
Gma04g01822 1064 MobiDBLite consensus disorder prediction 248 267 - -
Gma04g01822 1064 Pfam VAD1 Analog of StAR-related lipid transfer domain 896 1036 IPR031968 -
Gma04g01822 1064 Pfam VAD1 Analog of StAR-related lipid transfer domain 297 445 IPR031968 -
Gma04g01822 1064 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 578 703 IPR035892 -
Gma04g01822 1064 SMART C2_3c 579 678 IPR000008 -
Gma04g01822 1064 SMART C2_3c 53 150 IPR000008 -
Gma04g01822 1064 Gene3D - 729 856 IPR011993 -
Gma04g01822 1064 ProSiteProfiles VASt domain profile. 293 465 IPR031968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01822 Gma-Chr4 48323357 48328833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01822 30 201 Lipid Metabolism Gene Families AT1G22610 29.282 1.11e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01822 - - gmx:100811103 2031.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01822 04 48323357 48328833 Gma04g01822 04 48323357 48328833 ECH
Gma04g01822 04 48323357 48328833 Gma06g01587 06 15416862 15421894 GST