Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01545 ATGGGGAAGAAGACGAAGAAACCCGGCAAAGGCAAAGAGAAAACCGAGAGAAAAACCGCGAGAGCCGAAGAGAAGAAAGCTCGCAGGGAAACCAAGAAGCTCTCTCCCGAAGACGACATCGACGCCATTTTGTTGAGCATTCAAAAAGAGGAAGCTAAGAAGAAGGATGTCCAAGTCGACGACAACGTTCCCGCGCCTTCTCCTCGCTCCAACTGCTCGCTCACTGTCAATCCATTGAAGGAGACCGAGTTGATTCTCTACGGCGGCGAATTCTACAACGGAAACAAGACATTCGTGTATGGCGATCTCTTCCGGTATGATGTGGAGAAGCTGGAATGGAAATTGGTTTCCAGTCCTAACAGTCCTCCTCCTCGCAGTGCTCATCAAGCCGTTGCATGGAAGAATTATGTTTATATTTTTGGTGGTGAGTTTACATCTCCAAACCAAGAGCGGTTTCATCACTACAAGGATTTTTGGATGTTGGACCTGAAAACAAATCAGTGGGAGCAGCTTAATTTGAAAGGGTGCCCCAGTCCACGTTCAGGACATCGAATGGTATTGTACAAGCACAAGATTATTCTTTTTGGTGGCTTCTATGACACTCTTAGAGAAGTGAGGTTGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTTAAGTGGCAAGAAATAAAGCCTAAGCCCGCAGCAATGTGGCCAACTGCACGTAGTGGTTTTCAATTATTTGTTTACCAAGATGACATTTTTTTGTATGGTGGCTATTCGAAAGAAGTTTCATCTGATAAGAGCAACTCTGAGAAAGGAATTGTTCATTCAGATATGTGGTCCCTTGATCCTAAGTCTTGGGAATGGAACAAGGTTAAGAAAAGTGGAATGCCTCCTGGTCCTCGTGCTGGGTTTTCCATGTGTGTTCATAAGAGGAGGGCTCTGCTATTTGGTGGCGTTGTGGATATAGAAGTTGAAGTTGATGTAATGATGAGCTTGTTTTTGAATGAGCTTTATGGCTTTCAGTTAGACACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAGTCGACTAAAGATAAGTTAAAAAAAATAGAACAAAATTGTCCTGATGATGTTGACAAGAAGATAAATCCAGCATGTGCAACAAGAGAAGAAACTGAGGAGTCAGATGATGAAGAAAACAGCATTGATTATATATCCAAGAATATAGCGTCAAACATGTCTATTGATGATGGTGAAACACTTACCAAATCCGAAGGAAAGCCTAAGGAATCCAGTGCTAAATTGGACCTTCAAAGTTCTTTGCCTGAGGTTGTAGTGAAGCCCTGTGGACGTATTAATGCCTGCATGGCCGTTGGAAGAGATACATTATATATATATGGTGGCATGATGGAGATTAAAGATCAAGAAATCACTCTTGATGATTTGTATTCTTTGAACCTTAGCAAACTTGATGAATGGAAGTGCATTATACCGGCGTCAGAATCTGAATGGGTGGAAGCTTCagatgatgatgaagaaaatgatgatgatgaagatgaATCTGACAATGATGGTTCAACTGATGAGGATGAAGATGATGAGGAAGAGGAGGAGGAAGAGGCTCAGAATGCATCAGTTCAGGTGGTAGATGCCGTTGCTTTAATCAAAGGGGTGGGAAAGAATCTGCGGAGGAAAGAAAGGAGGTCACGGATAGAGCAGATTAGAGCTAGTCTTGGCTTGTCAGATTCACAGAGAACACCATTGCCAGGAGAATCCTTGAGGGATTTCTACAGGCGTACAAATATGTATTGGCAAATGGCAGCCCATGAACATACTCAACACACTGGAAAAGAACTCCGCAAGGATGGTTTTGATCTTGCTGAAGCTCGGTACAGGGAGCTAAAGCCTATTCTTGACGAGCTAGCTCTACTAGAAGCTGAGCAGAAAGCGGAGGAGGCCGAAGCACCAGAAACTAGTGCAAAGAAAAGAGGAAAGAAAAAAACTAGAAATTGA 1989 0.4223 MGKKTKKPGKGKEKTERKTARAEEKKARRETKKLSPEDDIDAILLSIQKEEAKKKDVQVDDNVPAPSPRSNCSLTVNPLKETELILYGGEFYNGNKTFVYGDLFRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYVYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMVLYKHKIILFGGFYDTLREVRLYYNDLFVFDLDQFKWQEIKPKPAAMWPTARSGFQLFVYQDDIFLYGGYSKEVSSDKSNSEKGIVHSDMWSLDPKSWEWNKVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDIEVEVDVMMSLFLNELYGFQLDTNRWYPLELRKEKSTKDKLKKIEQNCPDDVDKKINPACATREETEESDDEENSIDYISKNIASNMSIDDGETLTKSEGKPKESSAKLDLQSSLPEVVVKPCGRINACMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPASESEWVEASDDDEENDDDEDESDNDGSTDEDEDDEEEEEEEAQNASVQVVDAVALIKGVGKNLRRKERRSRIEQIRASLGLSDSQRTPLPGESLRDFYRRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLEAEQKAEEAEAPETSAKKRGKKKTRN 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01545 662 MobiDBLite consensus disorder prediction 1 35 - -
Gma06g01545 662 MobiDBLite consensus disorder prediction 408 430 - -
Gma06g01545 662 MobiDBLite consensus disorder prediction 493 538 - -
Gma06g01545 662 Pfam Galactose oxidase, central domain 135 187 - -
Gma06g01545 662 Coils Coil 12 32 - -
Gma06g01545 662 Pfam Galactose oxidase, central domain 448 490 - -
Gma06g01545 662 Pfam Galactose oxidase, central domain 68 122 - -
Gma06g01545 662 Gene3D - 43 368 IPR015915 GO:0005515
Gma06g01545 662 MobiDBLite consensus disorder prediction 641 662 - -
Gma06g01545 662 MobiDBLite consensus disorder prediction 12 35 - -
Gma06g01545 662 Pfam Domain of unknown function (DUF4110) 571 656 IPR025183 -
Gma06g01545 662 SUPERFAMILY Kelch motif 82 487 IPR015915 GO:0005515
Gma06g01545 662 Pfam Kelch motif 237 291 IPR011498 GO:0005515
Gma06g01545 662 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 655 - -
Gma06g01545 662 MobiDBLite consensus disorder prediction 496 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01545 Gma-Chr6 14894130 14912065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01545 91 315 Acyl Lipid Metabolism Gene Families AT3G05420 27.615 6.14e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01545 - - gmx:100807766 1180.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01545 06 14894130 14912065 Gma06g01545 06 14894130 14912065 ECH
Gma04g01867 04 48895672 48904291 Gma06g01545 06 14894130 14912065 GST