Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01867 ATGGGGAAGAAGACGAAGAAACCCGGCAAAGGCAAAGAGAAAACCGAGAGAAAAACCGCGAGAGCCGAAGAGAAGAAAGCTCGCAGGGAAACCAAGAAGCTCTCTCCCGAAGACGACATCGACGCCATTTTGTTGAGCATTCAAAAAGAGGAAGCTAAGAAGAAGGAGGTTCACGTCGACGACAACGTTCCCGCGCCTTCTCCTCGCTCCAACTGCTCCCTCACCGTCAATCCATTGAAGGAGACCGAGTTGATTCTCTACGGCGGCGAATTCTACAACGGGAACAAGACATTTGTGTACGGCGATCTCTACCGGTATGATGTGGAGAAGCTGGAATGGAAATTGGTTTCAAGTCCGAATAGTCCTCCTCCTCGCAGTGCTCATCAAGCCGTTGCGTGGAAGAATTATGTTTATATTTTTGGTGGTGAGTTTACGTCTCCAAACCAAGAGCGGTTTCACCACTACAAGGATTTTTGGATGTTGGACCTGAAAACAAATCAGTGGGAGCAGCTTAATTTGAAAGGGTGCCCCAGTCCACGTTCAGGACATCGAATGGTATTGTACAAGCACAAGATTATTCTTTTTGGTGGCTTCTATGACACTCTTAGAGAAGTGAGGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTTAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCAATGTGGCCAACTGCACGTAGTGGTTTTCAATTATTTGTTTACCAAGATGACATTTTTTTGTATGGTGGCTATTCAAAAGAAGTTTCATCTGATAAGAGCAACTCTGAGAAAGGAATTGTTCATTCAGATATGTGGTCCCTTGATCCTAAAACTTGGGAATGGAACAAGGTTAAGAAAAGTGGAATGCCTCCTGGTCCTCGTGCTGGGTTTTCCATGTGTGTTCATAAGAGAAGGGCTCTGCTATTTGGTGGTGTTGTGGATATAGAAGTTGAAGGTGATGTAATGATGAGCTTGTTTTTGAATGAGCTTTATGGATTTCAGTTAGACACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAGTCGACTAAAGATAAGCTAAAAAAAATTGAACAAAATTGTCCTGATGATGTCAACAAGATAAATCCAGCATGTACAACAAGAGAAGAAACTGAGGAGTCAGAGGATGAAGAAAACAACATCGACGATATATCCAAGAATATAGCATCAAACATGTCTATCGATGATGGTGAAACACTTACCAAATCCGAAGGAAAGGCCGAGGAATCCAGTGCTAAATTGGACATTCAAAGTTCTTTGCCTGAGGTAGTGAAGCCCTGTGGACGTATTAATGCTTGCATGGCCGTTGGAAGAGATACATTATACATATATGGTGGCATGATGGAGATTAAAGATCAAGAAATCACTCTTGATGATTTGTATTCTTTGAACCTTAGCAAACTTGATGAATGGAAATGCATTATACCGGCATCTGAATCTGAATGGGTGGAAGCTTCAGAtgatgatgaagaaaatgaagatgatgatgaagatgaatccgatggtgatagtctgactgatgaggatgaagatgacgaggaagaggaGGAGGAAGAGGCTCAGAATGCATCCGTTCAGGTGGGAGATGCCGTTGCTTTAATCAAAGGGGTGGGAAAGAATTTGCGGAGGAAAGAAAGGAGGGTACGGATAGAGCAGATTAGAGCTAGTCTTGGCTTGTCAGATTCACAGAGAACACCCTCGccaggagaatccttGAAGGATTTCTACAGGCGTACAAATATGTATTGGCAAATGGCAGCCCATGAACATACTCAACACACTGGAAAAGAACTCCGCAAGGATGGTTTTGATCTTGCTGAAGCTCGGTACAGGGAGCTAAAACCTATTCTTGATGAGCTGGCTCTATTAGAAGCTGAGCAGAAAGCAGAGGAGGCCGAAGGACCAGAAACTAGTGCAAAGAAAAGAGGAAAGAAGAAAACTAGAAATTGA 1983 0.4095 MGKKTKKPGKGKEKTERKTARAEEKKARRETKKLSPEDDIDAILLSIQKEEAKKKEVHVDDNVPAPSPRSNCSLTVNPLKETELILYGGEFYNGNKTFVYGDLYRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYVYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMVLYKHKIILFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPGAMWPTARSGFQLFVYQDDIFLYGGYSKEVSSDKSNSEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDIEVEGDVMMSLFLNELYGFQLDTNRWYPLELRKEKSTKDKLKKIEQNCPDDVNKINPACTTREETEESEDEENNIDDISKNIASNMSIDDGETLTKSEGKAEESSAKLDIQSSLPEVVKPCGRINACMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPASESEWVEASDDDEENEDDDEDESDGDSLTDEDEDDEEEEEEEAQNASVQVGDAVALIKGVGKNLRRKERRVRIEQIRASLGLSDSQRTPSPGESLKDFYRRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLEAEQKAEEAEGPETSAKKRGKKKTRN 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01867 660 MobiDBLite consensus disorder prediction 1 35 - -
Gma04g01867 660 MobiDBLite consensus disorder prediction 395 409 - -
Gma04g01867 660 MobiDBLite consensus disorder prediction 493 533 - -
Gma04g01867 660 MobiDBLite consensus disorder prediction 490 538 - -
Gma04g01867 660 Coils Coil 12 32 - -
Gma04g01867 660 Coils Coil 378 398 - -
Gma04g01867 660 Pfam Galactose oxidase, central domain 68 122 - -
Gma04g01867 660 Pfam Galactose oxidase, central domain 445 487 - -
Gma04g01867 660 SUPERFAMILY Kelch motif 82 484 IPR015915 GO:0005515
Gma04g01867 660 MobiDBLite consensus disorder prediction 638 660 - -
Gma04g01867 660 MobiDBLite consensus disorder prediction 372 424 - -
Gma04g01867 660 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 653 - -
Gma04g01867 660 Pfam Domain of unknown function (DUF4110) 569 654 IPR025183 -
Gma04g01867 660 Pfam Kelch motif 235 297 - -
Gma04g01867 660 Pfam Galactose oxidase, central domain 135 187 - -
Gma04g01867 660 MobiDBLite consensus disorder prediction 12 35 - -
Gma04g01867 660 Gene3D - 42 370 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01867 Gma-Chr4 48895672 48904291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01867 91 314 Acyl Lipid Metabolism Gene Families AT3G05420 28.151 1.74e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01867 - - gmx:100818228 1181.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01867 04 48895672 48904291 Gma04g01867 04 48895672 48904291 ECH
Gma04g01867 04 48895672 48904291 Gma06g01545 06 14894130 14912065 GST