Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01534 ATGCAAGTCCTGCAAACCTCTTATCTCTTCACTTTCCCTAAACCCCTAAACCCTTCCCCTTCTCATTTCCACCACCGTCTTCCGCCACGCCCTCCGCCATTCTTCCACCGCCGCCCCCTCACCATTCCCAAATCCTTCAGCTCCGACGAGTTCCCGGTGGACGAGACCTTCCTGGAGAACTTCGGCCCCAAGGACAAAGAAACCGAGGACGAAGCCCGCCGCCGCAACTGGATCGAGCGCGGGTGGGCCCCATGGGAGGAAATCCTCACTCCGGAGGCCGATTTCGCGCGCAAGAGCCTCAACGAAGGCGAGGAGGTTCCCCTCCGCTCCCCGGAAGCCATCGAAGCGTTCAAAATGCTAAACCCTAACTACCGCAAGAAGAAAAGGAAGGAAATGGGACTCACCGAGGAAGAGTTCTTCGCGAAGCAGTTCGAGATCAAGGGCGAGATTCCGGAGCCTCTCGTGACGACGTGGGCGGGGCCGCTGGTGGTGCGCCTCGTGCCGCCACGCGATTGGCCGCCTCGTGGGTGGCGCGTGGACCAGGAGGAGCTCGCGTTCATCCGCGAGGCGCATAAGGTGCAGGCGAGGAGGGTGAGGCTGGAGGAGGTGGAGAGCGGAGTGAGGACTGACACTGATGACGTGGGCTTGGATAGGTATAGGGTGTTTCTCAAGCAGTATAAGGAATGGGTCGAGGCTAACAAGGATAGGTTGGAAGAGGAGTCTTATAAGCAAGACCAAGATTATTACCCCGGTAGAAGGAAAAGAGGGAAGGACTACAAGGAGGGCATGTACGAGCTTCCGTTCTATTATCCTGGCCAAATTTGTGTAGGGAAGGTGACAATGTTGCATCTCTATCAAGGGGCATTTGTTGACATTGGCGGGGTACATGATGGGTGGGTTCCTATAAAGAACAATGATTGGTATTGGCTTCGCCATCACATAAAAGTGGGTATGCACGTCATTGTTGAAATTACGGCAAAGCGAGATCCTTATCGCTTCCGCTTTCCTATCGAACTTCGTTTTGTTGATCCAAATATAGACCATCTAATCTTTAACAAATTTGACTTCCCACCAATATTTCATCGTGATGAAGATACTAATGAAGATGAAATACGGCGTGACTGTGGAAGACCTCCTGTTCCTAGGAAAGATCCAGGAGACAAACCAGAGGAAGAACCTCTATTGTCTAATCATCCATATGTCGAGAAGTTGTGGCAAATTAATGTAGCTGAGCAAATGATTTTGGATGATATGGCAATTAATCCTGATAAATATGAAGGCAAAAAACTGTCAGATTTGGTTGATGAAGAAGATTTTGATGAACAAAACGCTGTTGAGTATACAAAAGTTCAATATAAGAATACCACGCTACCACAAACTACTCTGAAAACAAGTGTCAAAGAGCTTGACTTAGAGGCTGCACTTGCTGAGCGTGAGCTCCATGTTAAACTAAGGAAGGAAGCAGCGGACAGAGGTGAGAAATACAAAATTACCAAACTGAGGCGCAATGTTGAGATGGATGAGTATGACTACATGCATTGGCGTAGATCATTTGAGGAAAGAGAAGCATTGACTAGAGACATCAGCTGTCGCAAAGCTCTTGGTCTGCCATTGGAAGAGCCAGGAAGATATATGGATGCTAGTTTTTTTGGTAAAGATCAATATGATCCTACAAGTCCTCTGTATCGTTATGACTACTGGGGGGAACCCAAGAATTCGGAGAAGAGCATGCAAGAGCGGATGACAGATCTCCATAACAAAAAAATCGTGGGCAAGGGCAATGTTTGGTACGAAATGTCATATGAAGATTGCATCCAGCAACAGATGGAAAGTGAAGCCCAGTCTAAGGAGCAAGAAAACGATGAAGATACAAGGCAAGGTCAAGCTGATGAAGATGAGGATGACGAGGATGATGATGATGATTTTGACTTCAGTATTCTGAGCAGTTTCGGTAGTAATTTCTCCGATCAGCCTCATGTTAATGGGACCGAGTCTTCTACAATATCAGGTGAGGGCATGTTTGAGGATTGA 2031 0.481 MQVLQTSYLFTFPKPLNPSPSHFHHRLPPRPPPFFHRRPLTIPKSFSSDEFPVDETFLENFGPKDKETEDEARRRNWIERGWAPWEEILTPEADFARKSLNEGEEVPLRSPEAIEAFKMLNPNYRKKKRKEMGLTEEEFFAKQFEIKGEIPEPLVTTWAGPLVVRLVPPRDWPPRGWRVDQEELAFIREAHKVQARRVRLEEVESGVRTDTDDVGLDRYRVFLKQYKEWVEANKDRLEEESYKQDQDYYPGRRKRGKDYKEGMYELPFYYPGQICVGKVTMLHLYQGAFVDIGGVHDGWVPIKNNDWYWLRHHIKVGMHVIVEITAKRDPYRFRFPIELRFVDPNIDHLIFNKFDFPPIFHRDEDTNEDEIRRDCGRPPVPRKDPGDKPEEEPLLSNHPYVEKLWQINVAEQMILDDMAINPDKYEGKKLSDLVDEEDFDEQNAVEYTKVQYKNTTLPQTTLKTSVKELDLEAALAERELHVKLRKEAADRGEKYKITKLRRNVEMDEYDYMHWRRSFEEREALTRDISCRKALGLPLEEPGRYMDASFFGKDQYDPTSPLYRYDYWGEPKNSEKSMQERMTDLHNKKIVGKGNVWYEMSYEDCIQQQMESEAQSKEQENDEDTRQGQADEDEDDEDDDDDFDFSILSSFGSNFSDQPHVNGTESSTISGEGMFED 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01534 676 Coils Coil 606 626 - -
Gma06g01534 676 MobiDBLite consensus disorder prediction 607 676 - -
Gma06g01534 676 MobiDBLite consensus disorder prediction 624 644 - -
Gma06g01534 676 MobiDBLite consensus disorder prediction 646 670 - -
Gma06g01534 676 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 36 662 IPR044967 GO:0000427|GO:0003723
Gma06g01534 676 SUPERFAMILY Nucleic acid-binding proteins 268 327 IPR012340 -
Gma06g01534 676 ProSiteProfiles S1 domain profile. 272 340 IPR003029 GO:0003676
Gma06g01534 676 MobiDBLite consensus disorder prediction 367 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01534 Gma-Chr6 14790835 14798850 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01534 - - gmx:100783002 1342.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01534 06 14790835 14798850 Gma06g01534 06 14790835 14798850 ECH
Gma04g01877 04 48990899 48998453 Gma06g01534 06 14790835 14798850 GST