Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01877 ATGCAAGTCCTGCAAACCTCTTATCTCTTCACTTTCCCTAAACCCCTAAACCCTTCCCCTCAGCGTCTCCACCACCGTCTTCAGCCATTCCTCCACCACCGCCACCGCCGCCCCCTCACCATCTCCAAATCCTTCAGCTCCGACGAGTTCCCGGTGGATGAGACCTTCCTCGAGAACTTCGGCCCCAAGGACAAAGAAACCGAGGACGAAGCCCGCCGCCGCAACTGGATTGAGCGCGGGTGGGCCCCCTGGGAGGAAATCCTCACTCCGGAGGCCGATTTCGCCCGCAAGAGCCTCAACGAAGGCGAGGAGGTTCCCCTCCGCTCCCCGGAAGCCATCGAAGCCTTCAAAATGCTAAACCCTAACTACCGCAAGAAGAAAAGAGAGGAAATGGGACTCACCGAAGAAGAGTTCTACGCGAAGCAGTTCGAGATCAAGGGCGAGATTCCGGACCCTCTCGTGACGACGTGGGCGGGGCCGCTGGTGGTGCGCCTCGTGGCGCCGCGCGACTGGCCGCCCCGCGGGTGGTGCGTGGACCGGGAGGAGCTCGCGTTCATCCGCGAGGCGCACAGGATGCAGGCGAGGAGGGTGAGGCTGGAGGAGGTGGAGAGTGGAGTGAGGACTGACACTGATGACGCGGGCTTGGATAGGTATAAGGTGTTTCTCAAGCAGTATAAGGAGTGGGTGGAGGCTAACAAGGATAGGTTGGAAGTGGAGTCTTATAAGCAAGACCAAGATTACTACCCTGGTAGAAGGAAAAGAGGGAAGGACTACAAGGAGGGCATGTATGAGCTTCCGTTCTATTATCCTGGCCAAATTTGTGTAGGGAAGGTGACAATGTTGCATCTCTATCAAGGGGCATTTGTTGACATTGGCGGTGTACATGATGGGTGGGTTCCTATTAAGAACAATGATTGGTATTGGCTTCGCCATCACATAAAAGTGGGTATGCACGTCATTGTTGAAATTACGGCAAAGCGAGATCCTTATCGCTTCCGCTTTCCTATCGAACTTCGTCTTGTCGATCCAAATATAGATCATCTAATCTTTAACAAATTTGACTTCGCACCAATATTTCATCGTGATGAAGATACTAATGAAGATGAAATACGGCGTGACTGTGGAAGACCTCCTGTTCCTAGGAAAGATCCAGGAGACAGGCCAGAGGAAGAACCCCTATTGTCTAATCATCCATATGTCGAGAAGTTGTGGCAAATTAATGTAGCTGAGCAAATGATTTTAGATGATATGGCAATTAATCCTGATAAATATGAAGGCAAAAAGCTGTCAGATTTGGTTGATGAAGAAGATTTTGATGAACAAAATGCTGTTGAATATACAAAAGTTCAATATAAGAATACTATGCTACCACAAACTACTCTGAAAACAAGTGTCAAAGAGCTTGACTTAGAGGCTGCACTTGCTGAGCGTGAGCTCCATCTTAAACTAAGGACAGAAGCAGAGGACAGAGGTGAGAAATACAAAATTACCAAACTGAGGCGCAATGTTGAGATGGATGAGTATGACTACATGCATTGGCGTAGATCATTTGAGGAAAGAGAAACATTGATTAGAGACATCAGCTGTCGCAAAGTTCTTGGTCTGCCATTGGAAGAGCCAGGAAGATATATGGATGCTAGCTTTTTTGGTAAAGACCAATATGATCCTACAAGTCCTCTGTATCGTTATGACTACTGGGGGGAGCCCAAGAATTCAGAGAAGAGCATGCAAGAGCGGATGACAGATATCCATAACAAAAAAATTGTGGGCAAGGGCAATGTTTGGTACGAAATGTCTTATGAAGATTGCATCAAGCAACAGATGGAAAGTGAAGCCCAGTCTAAGGAGCAAGAAAACCATGAAGATACAAGGCAAGGCCATGCTGATGAAGATGAGGATGACAACGATGACGATGATTTTGACTTCAGTATTCTGAGCAGTTTCGGTAGTAATTTCTCAGAACAGCCTCATGTTAATGGGACCGAGTCTTCTACAATATCAAGTGGGGGCATGTTTGAGGATTGA 2025 0.48 MQVLQTSYLFTFPKPLNPSPQRLHHRLQPFLHHRHRRPLTISKSFSSDEFPVDETFLENFGPKDKETEDEARRRNWIERGWAPWEEILTPEADFARKSLNEGEEVPLRSPEAIEAFKMLNPNYRKKKREEMGLTEEEFYAKQFEIKGEIPDPLVTTWAGPLVVRLVAPRDWPPRGWCVDREELAFIREAHRMQARRVRLEEVESGVRTDTDDAGLDRYKVFLKQYKEWVEANKDRLEVESYKQDQDYYPGRRKRGKDYKEGMYELPFYYPGQICVGKVTMLHLYQGAFVDIGGVHDGWVPIKNNDWYWLRHHIKVGMHVIVEITAKRDPYRFRFPIELRLVDPNIDHLIFNKFDFAPIFHRDEDTNEDEIRRDCGRPPVPRKDPGDRPEEEPLLSNHPYVEKLWQINVAEQMILDDMAINPDKYEGKKLSDLVDEEDFDEQNAVEYTKVQYKNTMLPQTTLKTSVKELDLEAALAERELHLKLRTEAEDRGEKYKITKLRRNVEMDEYDYMHWRRSFEERETLIRDISCRKVLGLPLEEPGRYMDASFFGKDQYDPTSPLYRYDYWGEPKNSEKSMQERMTDIHNKKIVGKGNVWYEMSYEDCIKQQMESEAQSKEQENHEDTRQGHADEDEDDNDDDDFDFSILSSFGSNFSEQPHVNGTESSTISSGGMFED 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01877 674 MobiDBLite consensus disorder prediction 644 674 - -
Gma04g01877 674 MobiDBLite consensus disorder prediction 608 674 - -
Gma04g01877 674 MobiDBLite consensus disorder prediction 608 627 - -
Gma04g01877 674 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 29 660 IPR044967 GO:0000427|GO:0003723
Gma04g01877 674 MobiDBLite consensus disorder prediction 366 394 - -
Gma04g01877 674 Coils Coil 605 625 - -
Gma04g01877 674 ProSiteProfiles S1 domain profile. 271 339 IPR003029 GO:0003676
Gma04g01877 674 SUPERFAMILY Nucleic acid-binding proteins 267 326 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01877 Gma-Chr4 48990899 48998453 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01877 - - gmx:100775818 1368.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01877 04 48990899 48998453 Gma04g01877 04 48990899 48998453 ECH
Gma04g01877 04 48990899 48998453 Gma06g01534 06 14790835 14798850 GST