Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01533 ATGGCACCAACCTTACCTATAGAGTTTGCTGGACAGAAGGAATCCAGAAAGTACTCTCATTCACAGAATATGGGGAAATCTAGAAAATACTCCAAAGGTTATGCTACTGGCTTTGTTCCTGATTTTCGGCATGCTGTTGAGACTATTGGTGAATCAGAAGGGCTGGGTAGCTTGGGAAGGGTTGATATGGAACTGACGGCTTTGGCAGATTCTTGTGCACCAAAAAGGAAACGCCCTGGCTTGAATACCTGTGGTGGTGATTATGCTGGTAGTTTCAATGTACCATTTCGACATTTCTCATTATCCGCGATGTCAGGTTTTGAGCGAAAGGATTTGAAAGTGAGGTTAACTTGGGAACTTGAACAAGTAAGGGAATTTCAGAAGAAAATTGATGGTATGAACTCAAGTGTTGTTGGAGGATTGTCTCTCTTCAGTGACATAAGGGGCTGCAGTGCAGGGCAGAAGAGGCCTAAGCTGGAGAGCCAGCATAGTACAATGGAAGTATCAGTGCCACCTGGTAAGAAAAGGCCCGTACCAGGACATAATGGTCCCAAGTCAAAGAAAAGTATGTCTGAGCGTCTTGAACATGCAAAACCTGCTGCGCCAGTGACTTCATATGCTATGTTGATGAAATCGTGTGAGAATGTACTAAACCGATTGATGTCTCATCAATTTGCTTGGGTTTTTAACGATCCAGTTGATGTTGTTAAATTGAACATTCCAGATTATTTCACTGTCATCAAGCATCCAATGGATTTGGGTACTGTGAAGAAGAGAATAACCTCTGGCGAATATTCAAATCCCATGGATTTTGCTGCTGATGTGCGGCTGACTTTCGATAATGCAATGTTTTATAATCCAGCAGGCAATGATGTACACATCATGGCCGAGACCCTTAGTAAATTTTTTGAAACAAGGTGGAAGGCCATAGAGAAGAAAATTCCTGTTATTGATTGTGTTGCGTCCGAGCCTTCAAGACCTACTCGTGTTGAAACAGAAATTTCTGACCGAGTTCCTCCCACAAAAAAGAAGAAAATAACACCAAATGACTCTAGTGTCAAGCCAGAGCCTGTTAAAAGAATCGTTACCGTAGAAGAGAAGCAAAAATTGAGTCTAGAGTTGGAGACAATGATTGGAGAGCTGCCTGATAGCATTGTTGATTTCTTGAGAGAGCAAAGTTATAATGAAGGGCAAACCAATGATGATGAAATTGAGATCGATATTGATACTCTTAGTGATGATACCTTATTCAAACTGCGGAAGCTTCTTGATGATTACATGCTGGAGAAGCAAAAATCCCAGGCAAAAGCTGGACAATGTGAAATGGAGCTTCTGAATGAATCAGGGTTCAGCAATTCATCAATGCAACCTTGCAAAGGCAATGAACAGGTTGAGGAGGATGTGGACATTGTTGGTGGGAATGATCCTCCTATTTCCAATTATCCTTCATTAGAGATTGAAAATGATGTTACCAAGAGAAACAGTAAATGCAGTAGCTCAAGCAGCTCTAGTAGTGAATCTGGCTCTTCATCCAGTGATTCAGACTCAGTTAGTTCATCTGGTAGTGAGTTGGATATGGCTAAAACATCAGAACCTCTTAGTGCCACCAAGGAAAACATAGGATTTGGCTTGACTTCAGATCAAAACAAAGGGGATCCTGGTAATTCAGAAACTGGAAAGGATTCAACAAATGTGGGAGGCCAAGTTGAGGAGAGTTCCCAGAGTAGGCCTGTTGCTACTGAGCCAGAAAGCCATCAAGAGGGGGAGAGTGCTGCATCTAAGAGGCAAGTCTCTCCCGAAAAGCTCTACCGTGCAGCTTTATTAAGGAGCCGTTTTGCTGACACCATACTTAAAGCTCAAGAGAAAGCACTTGAAAAGGATGAAAAGCGAGATCCTGAAAAACTTAGGATTGAGCGAGAAGATCTTGAAAGGCGGCAGAAAGAAGAGAAAGCTCGGTTGCAGGCGGAGGCAAAGGCTGCAGAAGAGGCTCAGAGGAAAGCTGAAGCAGAAGCTGCAGCTGAAGCCAAAAGGAAAAGGGAACTGGAAAGAGAAGCAGCCCGCCAGGCTTTGCAAAAGATGGAGAAAACTGTTGATATCAATGAGAACAGTCAATTTTTGGAAGATCTAGAAATGCTTAGTGCTGTACATGATGAACACCTGCCAAGTTTCAAAGAAGAGACAAGCACAGATCAACCTCAAGATGGATTGGGTGGGATCAAGCTACAGGGAAATCCCTTGGAACAGCTAGGGTTGTACATGAaggatgaggatgaggaggaggatgaggaggaAGAGGATGAACTGCCTCCGAGTGGTGCTGTAGGACCATCAAATGATGTTGAAGAAGGAGAGATTGATTGA 2361 0.4248 MAPTLPIEFAGQKESRKYSHSQNMGKSRKYSKGYATGFVPDFRHAVETIGESEGLGSLGRVDMELTALADSCAPKRKRPGLNTCGGDYAGSFNVPFRHFSLSAMSGFERKDLKVRLTWELEQVREFQKKIDGMNSSVVGGLSLFSDIRGCSAGQKRPKLESQHSTMEVSVPPGKKRPVPGHNGPKSKKSMSERLEHAKPAAPVTSYAMLMKSCENVLNRLMSHQFAWVFNDPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGEYSNPMDFAADVRLTFDNAMFYNPAGNDVHIMAETLSKFFETRWKAIEKKIPVIDCVASEPSRPTRVETEISDRVPPTKKKKITPNDSSVKPEPVKRIVTVEEKQKLSLELETMIGELPDSIVDFLREQSYNEGQTNDDEIEIDIDTLSDDTLFKLRKLLDDYMLEKQKSQAKAGQCEMELLNESGFSNSSMQPCKGNEQVEEDVDIVGGNDPPISNYPSLEIENDVTKRNSKCSSSSSSSSESGSSSSDSDSVSSSGSELDMAKTSEPLSATKENIGFGLTSDQNKGDPGNSETGKDSTNVGGQVEESSQSRPVATEPESHQEGESAASKRQVSPEKLYRAALLRSRFADTILKAQEKALEKDEKRDPEKLRIEREDLERRQKEEKARLQAEAKAAEEAQRKAEAEAAAEAKRKRELEREAARQALQKMEKTVDINENSQFLEDLEMLSAVHDEHLPSFKEETSTDQPQDGLGGIKLQGNPLEQLGLYMKDEDEEEDEEEEDELPPSGAVGPSNDVEEGEID 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01533 786 SUPERFAMILY Bromodomain 189 315 IPR036427 GO:0005515
Gma06g01533 786 Coils Coil 639 703 - -
Gma06g01533 786 MobiDBLite consensus disorder prediction 717 786 - -
Gma06g01533 786 MobiDBLite consensus disorder prediction 154 196 - -
Gma06g01533 786 PANTHER TRANSCRIPTION FACTOR GTE10 25 765 - -
Gma06g01533 786 Gene3D - 356 434 IPR038336 -
Gma06g01533 786 ProSiteProfiles Bromodomain profile. 221 293 IPR001487 GO:0005515
Gma06g01533 786 Pfam Bromodomain 213 297 IPR001487 GO:0005515
Gma06g01533 786 ProSiteProfiles NET domain profile. 352 434 IPR027353 -
Gma06g01533 786 MobiDBLite consensus disorder prediction 334 350 - -
Gma06g01533 786 Gene3D - 187 318 IPR036427 GO:0005515
Gma06g01533 786 Pfam Bromodomain extra-terminal - transcription regulation 362 424 IPR027353 -
Gma06g01533 786 MobiDBLite consensus disorder prediction 490 581 - -
Gma06g01533 786 MobiDBLite consensus disorder prediction 334 354 - -
Gma06g01533 786 PRINTS Bromodomain signature 224 237 IPR001487 GO:0005515
Gma06g01533 786 PRINTS Bromodomain signature 240 256 IPR001487 GO:0005515
Gma06g01533 786 PRINTS Bromodomain signature 256 274 IPR001487 GO:0005515
Gma06g01533 786 PRINTS Bromodomain signature 274 293 IPR001487 GO:0005515
Gma06g01533 786 SMART bromo_6 202 312 IPR001487 GO:0005515
Gma06g01533 786 PANTHER TRANSCRIPTION FACTOR GTE8 25 765 - -
Gma06g01533 786 MobiDBLite consensus disorder prediction 753 769 - -
Gma06g01533 786 MobiDBLite consensus disorder prediction 622 687 - -
Gma06g01533 786 MobiDBLite consensus disorder prediction 490 599 - -
Gma06g01533 786 CDD Bromo_plant1 209 307 IPR037377 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01533 Gma-Chr6 14785597 14789544 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01533 - - gmx:100782458 1404.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01533 06 14785597 14789544 Gma04g01878 04 48999925 49003806 ECH
Gma06g01533 06 14785597 14789544 Gma06g01533 06 14785597 14789544 ECH
Gma04g01878 04 48999925 49003806 Gma06g01533 06 14785597 14789544 GST