Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01510 ATGGCGGCCACAGCTTCCAGAACCACCCCATTCTCTTCTCCCTCTTCCTCTTCACACCCCACCTTCCCCAAACGCATTGCTAGATCCACCCTCCCTCTCTCTCATCAAACCTTCATTAAACCCAACCACGCGCTCAAAATCAAATGTTCCATCTCCAAACCCCCCTCGCCGCCGGCCACCACCACCACTGCAGCGCCGGCAACATCAGAGCCCTTCGTGTCGCGGTTCGCCTCCGCTGAACCGCGCAAGGGCTCGGACATCCTTGTGGAGGCCCTTGAGCGGCTGGGCGTGACTAATGTCTTCGCCTACCCCGGCGGCGCGTCGATGGAGATCCACCAGGCTCTCACGCGCTCCTCCACCATCCGCAACGTCCTCCCTCGCCACGAGCAGGGCGGCATCTTCGCCGCCGAGGGCTACGCGCGCTCCTCTGGCCTCCCCGGCGTCTGCATCGCCACCTCCGGCCCCGGCGCCACCAACCTCGTCAGCGGCCTCGCCGACGCCTTAATGGACAGCGTCCCCGTCGTCGCCATCACCGGCCAGGTCCCCCGGCGCATGATTGGCACCGACGCCTTCCAAGAAACCCCCATCGTCGAAGTCACCAGATCCATCACCAAGCACAACTACCTCATCCTCGACGTCGACGACATTCCCCGCATCGTCGCCGAAGCCTTCTTCGTCGCCACCTCCGGCCGCCCCGGCCCGGTCCTCATCGACATCCCCAAAGACGTCCAACAGCAACTCGCCGTGCCTAATTGGGACGAGCCCATCAACCTCCCCGGGTACCTCGCCAGGCTTCCCAGGCCCCCCACCGAGGCCCAATTAGAGCACATTGTCAGACTCATAACCGAGGCCCAAAAGCCCGTCCTCTACGTCGGAGGTGGCAGTTTGAATTCCAGTGATGAATTGAGACGCTTTGTGGAACTGACTGGTATTCCCGTTGCTAGCACTTTAATGGGCCTTGGAACTTATCCTATTGGGGATGAATATTCCCTTCAAATGTTGGGTATGCATGGTACTGTTTATGCTAACTATGCTGTTGACAATAGTGATTTGTTGCTTGCCTTTGGGGTAAGGTTTGATGACCGTGTTACTGGGAAGCTTGAGGCTTTTGCTAGTAGGGCTAAGATTGTTCACATTGATATTGATTCTGCTGAGATTGGAAAGAATAAGCAGGCGCATGTGTCGGTTTGCGCGGATTTGAAGCTGGCCTTGCAGGGGATTAATATGATTTTGGAGAAAAAAAGAGTGGGGGGTGGTAAGCTTGATCTTGGAGGCTGGAGGGAAGAGATTAATGTGCAGAAACACAAGTTTCCATTGGGTTACAAAACATTCCAGGACGCCATTTCCCCGCAGCATGCTATTGAGGTTCTTGATGAGTTGACAAATGGGGATGCTATTGTTAGTACTGGGGTTGGGCAGCATCAAATGTGGGCTGCACAGTTTTACAAGTACAAGAGACCGAGGCAGTGGTTGACCTCGGGGGGTCTTGGAGCCATGGGTTTTGGATTGCCTGCGGCTATTGGCGCTGCTGTTGCTAACCCCGGCGCTGTTGTGGTTGACATTGATGGAGATGGTAGTTTCATCATGAATGTTCAAGAATTGGCAACTATAAGAGTGGAGAATCTTCCTGTTAAGATATTGTTGTTGAATAATCAGCATTTGGGCATGGTGGTTCAGTGGGAGGATCGGTTCTACAAGTCCAATAGAGCTCACACCTATCTTGGAGACCCGTCTAGCGAGAATGAGATATTCCCAAACATGCTCAAGTTTGCTGACGCTTGTGGGATACCGGCAGCGCGTGTGACGAAGAAGGAAGAGCTTAGAGCAGAAATTCAGAAAATGTTGGACACCCCTGGCCCCTACCTTCTTGATGTCATTGTGCCACATCAGGAGCATGTGTTGCCGATGATTCCCAGTAATGGATCCTTCAAGGATGTGATAACGGAGGGAGACGGTAGAACGAGCGGTTGGTAG 1974 0.5436 MAATASRTTPFSSPSSSSHPTFPKRIARSTLPLSHQTFIKPNHALKIKCSISKPPSPPATTTTAAPATSEPFVSRFASAEPRKGSDILVEALERLGVTNVFAYPGGASMEIHQALTRSSTIRNVLPRHEQGGIFAAEGYARSSGLPGVCIATSGPGATNLVSGLADALMDSVPVVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLILDVDDIPRIVAEAFFVATSGRPGPVLIDIPKDVQQQLAVPNWDEPINLPGYLARLPRPPTEAQLEHIVRLITEAQKPVLYVGGGSLNSSDELRRFVELTGIPVASTLMGLGTYPIGDEYSLQMLGMHGTVYANYAVDNSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQAHVSVCADLKLALQGINMILEKKRVGGGKLDLGGWREEINVQKHKFPLGYKTFQDAISPQHAIEVLDELTNGDAIVSTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPGAVVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVVQWEDRFYKSNRAHTYLGDPSSENEIFPNMLKFADACGIPAARVTKKEELRAEIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGRTSGW 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01510 657 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 470 625 IPR011766 GO:0003824|GO:0030976
Gma06g01510 657 PANTHER ACETOLACTATE SYNTHASE 49 655 - -
Gma06g01510 657 Pfam Thiamine pyrophosphate enzyme, central domain 275 405 IPR012000 GO:0000287|GO:0030976
Gma06g01510 657 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 83 648 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Gma06g01510 657 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 80 259 IPR029061 -
Gma06g01510 657 Gene3D - 72 265 - -
Gma06g01510 657 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 49 655 IPR045229 -
Gma06g01510 657 Gene3D - 440 626 - -
Gma06g01510 657 MobiDBLite consensus disorder prediction 1 24 - -
Gma06g01510 657 CDD TPP_AHAS 448 639 IPR039368 GO:0030976
Gma06g01510 657 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 447 647 IPR029061 -
Gma06g01510 657 Gene3D - 274 439 - -
Gma06g01510 657 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 83 246 IPR012001 GO:0030976
Gma06g01510 657 SUPERFAMILY DHS-like NAD/FAD-binding domain 270 438 IPR029035 -
Gma06g01510 657 CDD TPP_PYR_POX_like 86 241 - -
Gma06g01510 657 ProSitePatterns Thiamine pyrophosphate enzymes signature. 507 526 IPR000399 GO:0000287|GO:0030976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01510 Gma-Chr6 14536994 14539351 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01510 K01652 - gmx:100798203 1236.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01510 06 14536994 14539351 Gma06g01510 06 14536994 14539351 ECH
Gma04g01900 04 49269521 49271832 Gma06g01510 06 14536994 14539351 GST