Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01492 ATGGTGGCACCCATCAACATGCGGCTACAATTTCGGGGAAATTGGTGCAATGCCAACAAGGGAGGGGAGTTTTTGAAGCCAAGCTTTAATTCCTCATGCAACACTAATAATACATTGAACAATAAACGAAGATTTTCATTGCTGGTGATCACTGCAAGTTCTCAATGTAGTCCTGGGGGAATGAACACAATCAAAGGAATGAAACATGTTCCATTGGTTCATCTCGCAGCAGGCAAGTTGGCAAATGAAATTAGCAGAGAACATATTGTTACGTTGTTTCGTGGAAGGTTTGTGGAGGACAGGTTTGTATATAGGCAGACTTTCTTTGTTAGGTGCTACGAAATTGGACCAGATAAAACTATCACCATGGAGACACTCATGAATTTTCTCCAGGAAACTGCTTTAAACCATGTCTCCAGCTGTGGGGGAAGTCAGAACGGTTTTGGAGCTACTCAGGAAATGGACCTTCGCAATCTCATTTGGGTTGTTACTCGTTTTCAAGTTCAAGTACAGAGATATAGCAAATGGAGGGATGAAATTGAGGTTGAAACTTGGTTTGATGTTGCCGGAAAGAATGGAACGCGAAGAGATTGGATAGTCAGGGACCATTACACCAAAGAGATTATAGCTAAAGCAACCAGCATATGGGCAATCGTGAATCAAGAAACAAGAAGATTATGCAAGATACCTGAAGAAGTTAGACAAGAACTTGTTACTTTCTACTTTAATAGGTTTGCCATCGCCAGGGAAGAAATAGATCATCAGAAGATACAAAAGCTCACTGATGACACTGCTGAGAGTTTTCGATTTGGTGTGACTCCAGGGAGGAACGACATGGATGTTAACCAGCATGTTAACAATGTAAAATACATCACATGGATCTTAGAGAGCGTGCCAAGAGAAGTATTAGAAGATTACAAAATGACAAGCATTACTTTGGAGTTTCGGCGTGAATGTACTCAATCAGATTTGTTGGAGTCATTGATAGGTCCATCCTCCAGCGTGATTGGTGCCTCTGATAATAACTCTATCAACAGAAAACCCGGCCTGCAATATATACACCTGCTTCGTCTACAAGACAATAAAGCCGAGTTGGTCCGAGCCAGAACAGATTGGCATCTTAAGCAAAACCACGAGTGA 1140 0.4167 MVAPINMRLQFRGNWCNANKGGEFLKPSFNSSCNTNNTLNNKRRFSLLVITASSQCSPGGMNTIKGMKHVPLVHLAAGKLANEISREHIVTLFRGRFVEDRFVYRQTFFVRCYEIGPDKTITMETLMNFLQETALNHVSSCGGSQNGFGATQEMDLRNLIWVVTRFQVQVQRYSKWRDEIEVETWFDVAGKNGTRRDWIVRDHYTKEIIAKATSIWAIVNQETRRLCKIPEEVRQELVTFYFNRFAIAREEIDHQKIQKLTDDTAESFRFGVTPGRNDMDVNQHVNNVKYITWILESVPREVLEDYKMTSITLEFRRECTQSDLLESLIGPSSSVIGASDNNSINRKPGLQYIHLLRLQDNKAELVRARTDWHLKQNHE 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01492 379 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 76 377 - -
Gma06g01492 379 Pfam Acyl-ACP thioesterase 103 373 IPR002864 GO:0006633|GO:0016790
Gma06g01492 379 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 265 372 IPR029069 -
Gma06g01492 379 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 98 244 IPR029069 -
Gma06g01492 379 Gene3D Hotdog Thioesterase 95 378 - -
Gma06g01492 379 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 76 377 IPR045023 GO:0006633|GO:0016297
Gma06g01492 379 CDD 4HBT 102 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01492 Gma-Chr6 14378682 14382292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01492 95 375 Acyl Lipid Metabolism Gene Families AT1G08510 50.178 1.39e-93 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01492 K10781 - gmx:100795014 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01492 06 14378682 14382292 Gma06g01492 06 14378682 14382292 ECH
Gma04g01914 04 49442722 49446026 Gma06g01492 06 14378682 14382292 GST