Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01914 ATGACATCAATGGTGGCACCCATCAACATGGGGCTACAATTTCGAGGAAATTGGTGCAATGTCAACAAGAACAAGGGAAGGGAGTTTTTGAAGCCAAACTTTAATTCCTCATGCAACACTAATATTGCATTGAACAATAAACGAAGATTTTCATTGTTGGTGACTGCAAGTTCTCAATGTAGTCCTGGGAGAATAATGGGCACAATCAATGAAATAAAACATGTTCCAATGATTCATCCTGCAGCAGGAAAGTTGGCAAATGAAAACAAACAACATACAACCCTTGTTACCTTGTTTCGTGGAAGGTTTGTGAAAGACAGGTCTGTATATAGGCAAATTTTCTTTGTCAGATCTTACGAAATTGGCCCGGATAAAACTATCACCGTGGAGACACTAATGAATTTTCTCCAGGAAACTTGTCTAAATCATATGTCCAACTGTGGGGTAACTCAAAACGATTTTGGAGCTACTCACGAAATGGACCTTCGCAAACTCATATGGGTTGTTACTCGTATTCAAGTTCAAGTACAGAGATATAGCAAATGGGGGGAGGAAATTGAGGTTGATACTTGGTTTGATATTGCCGGAAAGAATGGGATTCGGAGAGATTGGATAATCAGGGATCATTATACCAAAGAGATCATAGCAAAAGCAACTAGCACATGGACGATGATGAATAGAGAAACAAGAAGATTATCCAAGATATCTGAAGAAGTCAGACAAGAACTGGTTCCTTTCTTCTTTAATAAGCTTGCCATTGCCAGGGAAGAAATAGATCATCAGAAGATACACAAGCTCACTGACTCCACTGCTGAGAGTTTTCGATATGGAGTGACTCCAGGGTGGAACGACATGGATGTTAACCAGCATGTTAACAATGTAAAATACATCAGATGGATCTTAGAGAGTGTGCCAAGAGAAGTATTAGAAGATTATAAAATGACAAGCATGACTTTAGAGTTTCGGCGTGAATGTACTCAATCAGATTTGTTGGAATCAATGAGTAGTTCATCCTCCAACGTGACTGGTGCCTCTAATAATGACTCTGTTAACACAAAACCTGACCTGCAATATATACACCTGCTTCGTCTACAAGACACTAAAGCCGAGTTGGTCCGAGCCAGAACAGAATGGCATCTTAAGCAAAATCACAAGTGA 1158 0.3972 MTSMVAPINMGLQFRGNWCNVNKNKGREFLKPNFNSSCNTNIALNNKRRFSLLVTASSQCSPGRIMGTINEIKHVPMIHPAAGKLANENKQHTTLVTLFRGRFVKDRSVYRQIFFVRSYEIGPDKTITVETLMNFLQETCLNHMSNCGVTQNDFGATHEMDLRKLIWVVTRIQVQVQRYSKWGEEIEVDTWFDIAGKNGIRRDWIIRDHYTKEIIAKATSTWTMMNRETRRLSKISEEVRQELVPFFFNKLAIAREEIDHQKIHKLTDSTAESFRYGVTPGWNDMDVNQHVNNVKYIRWILESVPREVLEDYKMTSMTLEFRRECTQSDLLESMSSSSSNVTGASNNDSVNTKPDLQYIHLLRLQDTKAELVRARTEWHLKQNHK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01914 385 Gene3D Hotdog Thioesterase 101 384 - -
Gma04g01914 385 CDD 4HBT 116 226 - -
Gma04g01914 385 Pfam Acyl-ACP thioesterase 108 379 IPR002864 GO:0006633|GO:0016790
Gma04g01914 385 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 30 384 - -
Gma04g01914 385 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 265 378 IPR029069 -
Gma04g01914 385 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 106 252 IPR029069 -
Gma04g01914 385 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 30 384 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01914 Gma-Chr4 49442722 49446026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01914 101 381 Acyl Lipid Metabolism Gene Families AT1G08510 52.669 2.05e-99 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01914 K10781 - gmx:100791811 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01914 04 49442722 49446026 Gma04g01914 04 49442722 49446026 ECH
Gma04g01914 04 49442722 49446026 Gma06g01492 06 14378682 14382292 GST