Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01461 ATGGAGAACACTGGTTTGTGTGTACTATGCTTTATACTACTCCTCCTGTTGGGGTGTGTCATTTCCTCAGAATGTAAGTATATAAGATACAACACAACATCAACCATTGTTCCTGGGAAACTCAACGTTCACTTGGTCCCTCACACTCACGATGATGTTGGATGGTTGAAGACCATTGACCAGTACTATGTTGGTTCCAACAACTCAATTCAGGGGGCGTGCGTTCAAAACGTGCTCGATTCCCTGGTAACCGCATTGCTGGCAGACAAGAATCGCAAGTTCATATATGTTGAACAGGCATTTTTCCAGCGATGGTGGAGGGAGCAAAGTGATGATATCCAGAATATAGTCAAGGAGCTGGTCAACTCTGGTCAATTGGAGTTCATAAATGGTGGTTTTTGTATGCATGATGAGGCTGCTACTCATTACATTGACATGATTGATCAGACAACTCTTGGACATCAATTTATTAAAGAAGAATTTGGAGTGACTCCGAGAATAGGGTGGCAGATTGACCCATTTGGACATTCTGCAGTGCAGGCCTACTTGTTGGGGGCAGAGGTTGGATTTGACTCTCTATTCTTTGCACGGATTGATTACCAAGACAGAGCCAAGAGAAAAGATGAAAAAACTCTTGAAGTTGTGTGGCGGGGCTCCAAGAGCTTTGGTTCATCATCACAGATATTTTCTGGTGCATTCCCTGAGAATTATGAACCTCCCAGTAGTTTCTACTATGAAGTAAATGATGATTCTCCCATTGTTCAGGATGATGTCAGTTTATTTGATTACAATGTCCCTGAAAGAGTAAATGAGTTTGTGGCAGCAGCAATATCACAGGCCAATATTACGCGCACAAATCATATAATGTGGACAATGGGGACAGATTTCAAGTACCAATATGCACAAACTTGGTTCCGACAATTGGACAAGTTTATTCACTATGTTAATCAAGATGGTCGTGTTCATGCCTTATACTCAACTCCATCAATATATACTGATGCAAAACATGCTGCCAAGGAGGCCTGGCCAATCAAGACTGATGACTTCTTTCCGTATGCAGATCGTGTAAATGCCTATTGGACTGGGTATTTTACAAGCAGGCCAGCAATCAAAGGTTATGTCAGATTCATGAGTGGCTACTACTTGGCAGCAAGGCAGTTGGAATATTTTAAAGGGAAGAGTCCCTTATGTCCCAAAACTGACTCTTTGGCTGAAGCCTTGGCTATTGCTCAACATCATGACGCGGTATCTGGTACAGAAAAGCAGCATGTTGCTAATGATTATGCTAAACGACTTTCAATAGGTTACACAGAGGCTGAGAAAGTTGTTGCATTATCACTTGCTTGTTTGACAGAGGGAGCAACCAAAACAGGTTGTAAGAACCCACAGACTAAATTTCAACAGGCAAGTAGTGATTGTCCACTTCTGAACATAAGTTACTGTCCTGCATCAGAAGTTGATTTCTCAAATGGGAAAAACTTGGTAGTTGTTGTTTACAATGCTCTAGGATGGAAAAGAGAGGATATCATAAGGATTCCTGTTGTCAATGAAAATGTTGTTGTTCGGGATTCCAGTGGAAAAAACATCCAATCCCAGCTGGTGCCAATACTTGACGATTTTCGTGGTTTAAGAAACTACCACACTGTCGCATACTTGGGAGTGTCTCCAACTGCAAAACCCAAATACTGGCTTGCTTTTGCAGCAACAGTTCCCCCCATTGGTTTTAGCACTTACTATGTATCCTATGCCAAAAAAGAAGCTACTATTTCAGATAGAGATACAGCTTACCAACCAGGGAATAAGAGTGATACAATTACAGTGGGCCTAAAAAACTTGAACCTAGTTTATTCTGTGAAGGACGGGAAACTTATTCAATATATCAACAGCAGAAGCAAGGTCAATGAATCTCTAGAGCAGGCATATAAATTTTACGCTGGGTATGGAAATGATGGAACAGAAACTGCTCAGGCTTCTGGAGCATATATTTTCCGCCCTGATGGTTCACCCTCTCCCATCAAATCCAACGGGAAGTCTCCTCTCACAGTTTTTCGGGGACCAATTGTGCATGAAGTGCATCAGAAGATCAGTCCATGGATATACCAGACTACTAGACTGTACAAGGGGAAAGAACATGCTGAAGTTGAGTTCATTGTTGGACCTATACCCATTGATGATCGAGTTGGCAAAGAAATTGCAACTGAGATCAAAACAAATCTAGCAAGCAACAAAACCTTCTATACTGATTCCAATGGACGTGATTTCATTGAACGTGTTCGAGACTATAGAGAAGACTGGCACTTGGAAGTAAATCAACCTGTTGCTGGAAATTACTACCCTATCAACCTTGGAATTTACCTGAAAGATAAAAGCAAAGAGTTCTCTATATTGGTAGATAGAGCCGTGGGGGGCTCCAGCATCATAGATGGACAATTGGAGCTAATGGTTCATAGGAGGTTACTTGAGGATGATTCCAGAGGTGTTGCAGAGGCACTGAATGAAACAGTTTGCATTCATGATAACTGCACTGGGTTAACTGTGCTTGGGAAGTACTATTTCAGAATTGATCCTGTAGGAGAGGGTGCCAGATGGCGCCGATCATTTGCTCAGGAGATATACTCACCCTTGCTTTTAGCCTTCACAGAGGGTGAAGGTCACTGGGGAGATTCTCATGTCACAACCTTCTCAGCAATAGATTCCTCATACAACTTACCAGATAATGTTGCCATAATAACCCTCCAGGATCTGAGTGATGGAAGAGTTCTCCTACGGTTGGCACACTTATATGAGATTGATGAGGACAAGTATCTTTCAGTGAAGGCAACTGTAGAACTTAAAAAGGTGTTTCCCAACAAGCAGATAAACAAAATAACTGAAGTGAGCTTATCAGCAAACCAAGAAAGAGCAGAAATGGAGAGGAAGAGATTGGTTTGGCAAGTTAAAGGGTCACCTCCAGAACCCAAGGTGTGGAGGGGAGGACCAGTAGATCCAGAAAATCTAATTGTAGAACTTGCTCCAATGGAAATAAGGACTTTTATCATCAGTTTTAGGCATTAA 3054 0.4194 MENTGLCVLCFILLLLLGCVISSECKYIRYNTTSTIVPGKLNVHLVPHTHDDVGWLKTIDQYYVGSNNSIQGACVQNVLDSLVTALLADKNRKFIYVEQAFFQRWWREQSDDIQNIVKELVNSGQLEFINGGFCMHDEAATHYIDMIDQTTLGHQFIKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFARIDYQDRAKRKDEKTLEVVWRGSKSFGSSSQIFSGAFPENYEPPSSFYYEVNDDSPIVQDDVSLFDYNVPERVNEFVAAAISQANITRTNHIMWTMGTDFKYQYAQTWFRQLDKFIHYVNQDGRVHALYSTPSIYTDAKHAAKEAWPIKTDDFFPYADRVNAYWTGYFTSRPAIKGYVRFMSGYYLAARQLEYFKGKSPLCPKTDSLAEALAIAQHHDAVSGTEKQHVANDYAKRLSIGYTEAEKVVALSLACLTEGATKTGCKNPQTKFQQASSDCPLLNISYCPASEVDFSNGKNLVVVVYNALGWKREDIIRIPVVNENVVVRDSSGKNIQSQLVPILDDFRGLRNYHTVAYLGVSPTAKPKYWLAFAATVPPIGFSTYYVSYAKKEATISDRDTAYQPGNKSDTITVGLKNLNLVYSVKDGKLIQYINSRSKVNESLEQAYKFYAGYGNDGTETAQASGAYIFRPDGSPSPIKSNGKSPLTVFRGPIVHEVHQKISPWIYQTTRLYKGKEHAEVEFIVGPIPIDDRVGKEIATEIKTNLASNKTFYTDSNGRDFIERVRDYREDWHLEVNQPVAGNYYPINLGIYLKDKSKEFSILVDRAVGGSSIIDGQLELMVHRRLLEDDSRGVAEALNETVCIHDNCTGLTVLGKYYFRIDPVGEGARWRRSFAQEIYSPLLLAFTEGEGHWGDSHVTTFSAIDSSYNLPDNVAIITLQDLSDGRVLLRLAHLYEIDEDKYLSVKATVELKKVFPNKQINKITEVSLSANQERAEMERKRLVWQVKGSPPEPKVWRGGPVDPENLIVELAPMEIRTFIISFRH 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01461 1017 SMART Alpha_mann_mid_2 358 432 IPR015341 GO:0004559|GO:0006013
Gma06g01461 1017 Gene3D - 482 605 IPR013780 -
Gma06g01461 1017 Gene3D Glycoside hydrolase family 38, central domain 399 456 IPR037094 GO:0004559|GO:0006013
Gma06g01461 1017 Gene3D - 606 873 - -
Gma06g01461 1017 PANTHER ALPHA-MANNOSIDASE 15 1016 - -
Gma06g01461 1017 SUPERFAMILY Families 57/38 glycoside transferase middle domain 357 451 IPR028995 -
Gma06g01461 1017 Gene3D - 891 1017 - -
Gma06g01461 1017 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 906 1012 IPR041147 -
Gma06g01461 1017 Gene3D Glycoside hydrolase 38, N terminal domain 41 321 IPR027291 -
Gma06g01461 1017 SUPERFAMILY Glycoside hydrolase/deacetylase 30 354 IPR011330 GO:0005975
Gma06g01461 1017 Pfam Alpha mannosidase middle domain 358 450 IPR015341 GO:0004559|GO:0006013
Gma06g01461 1017 Pfam Glycosyl hydrolases family 38 N-terminal domain 42 353 IPR000602 GO:0004559|GO:0006013
Gma06g01461 1017 CDD GH38N_AMII_LAM_like 41 317 - -
Gma06g01461 1017 Gene3D Glycoside hydrolase family 38, central domain 322 398 IPR037094 GO:0004559|GO:0006013
Gma06g01461 1017 SUPERFAMILY Galactose mutarotase-like 472 1015 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gma06g01461 1017 PANTHER ALPHA-MANNOSIDASE 15 1016 - -
Gma06g01461 1017 Pfam Glycosyl hydrolases family 38 C-terminal domain 611 825 IPR011682 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01461 Gma-Chr6 13961791 13970133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01461 9 929 Glycoside Hydrolase AT5G13980 69.181 0.0 1325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01461 K01191 - gmx:100802094 2030.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01461 06 13961791 13970133 Gma04g01943 04 49858389 49866861 ECH
Gma06g01461 06 13961791 13970133 Gma06g01461 06 13961791 13970133 ECH
Gma04g01943 04 49858389 49866861 Gma06g01461 06 13961791 13970133 GST