Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01400 ATGGAGAAGTGGGTGGCTTTGGTGTTGCTGTTGGTTTTGTGGAAAATAAGGGAAGGTTTTGGCGTTGAAGCTGAGGAGGTGACATATGATGGAAGATCTCTCATCATTGATGGCCAGAGAAAAATTCTCTTCTCTGGTTCAATTCATTATCCTCGAAGCACTCCTCAGATGTGGCCAGATTTGATAGCGAAAGCAAAACAAGGAGGACTAGATGTGATTCAGACCTATGTGTTTTGGAATTTACACGAGCCCCAACCCGGAATGTATGATTTCAGCGGTAGATATGACTTGGTGGGATTCATAAAGGAAATCCAAGCTCAAGGGCTGTATGTTTGCCTCAGGATTGGACCTTTCATCGAGAGTGAATGGACATACGGGGGATTCCCTTTCTGGTTACATGATGTACCTGGCATTGTCTACCGGACGGATAATGAACCATTCAAGTTCTACATGCAAAATTTTACAACAAAAATTGTGAACATGATGAAAGAAGAGGGACTATATGCTTCGCAAGGAGGCCCAATTATATTGTCACAGATTGAAAATGAATACCAAAACATCCAAAAGGCATTTGGCACAGCAGGATCACAGTATGTTCAATGGGCTGCAAAAATGGCAGTGGGCCTTGACACTGGCGTACCATGGATTATGTGCAAGCAAACTGACGCTCCTGATCCTGTGATCAACACATGCAATGGCATGAGATGCGGAGAAACTTTTACCGGACCGAATTCCCCCAATAAACCTGCATTGTGGACTGAGAACTGGACATCTTTCTATCAAGTGTATGGTGGACTGCCATACATAAGGTCTGCTGAAGATATTGCATTTCATGTCACCCTTTTTATTGCAAGAAATGGAAGCTATGTCAATTATTACATGTACCATGGAGGAACCAACTTTGGGAGAACGGGCTCAGCTTATGTTATAACAGGCTATTATGATCAAGCCCCACTTGATGAATATGGTTTGCTTAGGCAACCAAAGTGGGGACATCTCAAGCAGTTACATGAAGTAATTAAATCTTGCTCTACCACATTATTACAAGGAGTACAGAGGAACTTCACTTTAGGTCAACTTCTCGAAGTTTATGTCTTTGAAGAAGAAAAAGGAGAATGTGTTGCATTCCTTATAAACAATGATAGAGATAATAAGGCTACTGTGCAATTCCGCAACAGCTCATATGAATTGCTCCCCAAGTCCATAAGCATCTTACCAGATTGTCAAAATGTGACTTTCAGCACTGCAAATGTAAATACAACAAGCAACAGAAGGATCATAAGTCCAAAACAAAACTTTAGCTCAGTGGATGATTGGCAACAATTCCAAGATGTCATTTCAAACTTTGATAATACCTCATTAAAATCGGATTCATTACTTGAGCAAATGAATACAACCAAAGATAAATCAGATTACCTTTGGTATACTCTTAGGTTTGAATATAATTTATCTTGCAGCAAACCAACACTTAGTGTTCAGTCTGCTGCTCATGTTGCCCATGCTTTTGTGAACAACACATACATAGGAGGGGAACATGGAAATCATGATGTGAAATCATTCACCTTAGAGCTCCCGGTTACAGTAAATCAAGGGACAAACAACCTTTCTATACTCAGCGTTATGGTTGGACTTCCGGATTCAGGGGCATTTCTCGAAAGAAGGTTCGCTGGTTTAATCAGTGTGGAACTTCAGTGCAGCGAACAAGAGTCTCTTAATTTGACCAATTCTACGTGGGGTTATCAGGTTGGATTAATGGGGGAGCAATTACAAGTATATAAAGAGCAAAATAACAGTGATACTGGATGGAGTCAACTGGGGAATGTTATGGAACAAACGCTTTTTTGGTACAAGACTACATTTGACACACCAGAGGGAGATGACCCTGTTGTTTTGGACCTTAGCTCAATGGGAAAAGGTGAGGCTTGGGTAAATGGAGAAAGCATTGGTCGCTATTGGATCTTGTTTCATGATTCCAAAGGCAACCCTTCACAATCACTGTATCACGTGCCTCGGTCTTTCCTTAAAGACTCTGGAAACGTTTTGGTTTTGCTAGAGGAAGGTGGTGGGAACCCTCTTGTGGCCTCATCTGCCAATGTCAGCTACGACGGTCGCTCCCTCATTATTGATGCCCAACGGAAACTTCTTATCTCTGCCTCCATTCATTACCCACGCAGCGTTCCCGCGATGTGGCCTGGTCTTGTTCAAACAGCCAAGGAAGGAGGAGTAGATGTGATTGAAACCTATGTTTTCTGGAATGGCCATGAGCTTTCTCCAGGCAATTATTACTTTGGAGGAAGGTTTGATCTGGTCAAGTTTGCCCAGACTGTTCAGCAGGCTGGGATGTACTTGATTCTTCGAATAGGCCCATTTGTTGCTGCAGAATGGAATTTTGGTGGTGTACCGGTATGGCTGCATTATGTTCCAGGCACGGTATTCCGGACTTACAATCAGCCTTTTATGTATCATATGCAGAAGTTTACAACTTACATAGTGAACCTTATGAAACAAGAGAAGCTTTTTGCTTCACAAGGGGGTCCCATAATCTTAGCCCAGGCAAAAAATGAATATGGGTACTATGAAAATTTTTATAAGGAGGATGGTAAGAAATATGCCTTGTGGGCTGCAAAGATGGCTGTTTCTCAAAATACAGGTGTCCCTTGGATAATGTGCCAACAATGGGATGCTCCAGATCCTGTGATTGATACATGCAATTCATTCTACTGTGACCAATTTACACCCACTTCTCCAAACAGGCCCAAAATTTGGACTGAGAACTGGCCTGGATGGTTTAAAACTTTTGGGGGCAGAGATCCTCACAGGCCAGCAGAAGATGTTGCATTTTCTGTTGCTCGTTTCTTCCAGAAAGGTGGAAGTGTACATAATTACTACATGTATCATGGAGGAACAAATTTTGGGCGTACAGCAGGTGGTCCATTCATTACTACAAGTTATGACTATGATGCCCCAGTGGATGAGTATGGGTTACCTAGACTTCCTAAATGGGGACATCTTAAGGAACTTCACAGAGCTATCAAGTTATGTGAGCACGTATTGCTTAATGGTAAATCAGTTAATATCTCCCTTGGTCCTTCTGTGGAGGCTGATGTCTATACTGACTCATCAGGAGCATGTGCTGCCTTTATTTCTAACGTTGATGATAAAAATGATAAGACTGTGGAATTTCGAAATGCATCATTTCACTTGCCAGCTTGGTCGGTTAGCATTCTTCCTGATTGCAAGAATGTAGTATTCAACACAGCTAAGGTTACTTCCCAGACAAGTGTAGTTGCAATGGTTCCCGAGAGTTTGCAGCAATCAGATAAAGTTGTAAATTCTTTTAAATGGGACATAGTGAAGGAGAAGCCAGGAATCTGGGGGAAGGCAGACTTTGTCAAAAATGGTTTTGTTGATCTCATCAATACTACCAAAGATACCACTGACTACCTGTGGCATACAACAAGTATATTTGTAAGTGAAAATGAAGAGTTCTTAAAGAAGGGAAACAAACCAGTTCTTCTAATTGAATCCACGGGTCATGCTCTCCATGCTTTTGTGAATCAGGAATATGAAGGTACTGGTTCTGGAAATGGTACACATGCACCATTCACTTTTAAGAATCCCATCTCCCTCAGGGCAGGGAAAAATGAAATTGCTTTGCTATGCTTGACCGTTGGCTTACAGACAGCTGGACCATTTTATGACTTCGTAGGGGCAGGACTAACTAGTGTGAAGATCAAGGGACTGAACAATGGGACAATAGACTTGTCTTCTTATGCCTGGACTTACAAGATTGGAGTCCAAGGAGAATATCTAAGGTTATACCAGGGAAATGGGTTGAATAATGTGAACTGGACATCTACTTCAGAACCACCAAAAATGCAGCCATTGACATGGTACAAGGCTATTGTAGATGCTCCACCTGGGGATGAGCCAGTTGGATTGGATATGTTGCATATGGGAAAGGGTCTAGCCTGGTTAAATGGAGAAGAAATAGGAAGATATTGGCCTAGGAAAAGTGAATTCAAGAGTGAAGATTGTGTGAAAGAATGTGATTACAGAGGCAAATTCAATCCTGACAAATGTGACACTGGTTGTGGAGAACCTACACAGAGATGGTACCATGTTCCACGATCTTGGTTCAAGCCATCTGGAAATATTCTTGTTCTTTTTGAGGAGAAAGGTGGAGATCCAGAAAAGATCAAGTTTGTGAGACGTAAAGTATCTGGAGCTTGTGCCCTTGTTGCTGAGGATTACCCCTCTGTTGCACTCGTTTCTCAGGGTGAAGATAAAATACAGAGTAACAAAAACATTCCTTTTGCCCGTTTGGCATGCCCCGGTAACACTCGTATATCTGCTGTGAAGTTTGCTAGCTTTGGAAGCCCATCTGGGACATGTGGATCTTACCTCAAGGGAGATTGCCATGATCCCAATTCTAGCACAATTGTTGAGAAGGCGTGCCTAAACAAAAACGACTGTGTCATAAAATTAACTGAAGAGAATTTCAAAAGCAACTTGTGTCCTGGTTTATCAAGGAAACTTGCAGTGGAAGCAGTCTGTAGTTGA 4563 0.4201 MEKWVALVLLLVLWKIREGFGVEAEEVTYDGRSLIIDGQRKILFSGSIHYPRSTPQMWPDLIAKAKQGGLDVIQTYVFWNLHEPQPGMYDFSGRYDLVGFIKEIQAQGLYVCLRIGPFIESEWTYGGFPFWLHDVPGIVYRTDNEPFKFYMQNFTTKIVNMMKEEGLYASQGGPIILSQIENEYQNIQKAFGTAGSQYVQWAAKMAVGLDTGVPWIMCKQTDAPDPVINTCNGMRCGETFTGPNSPNKPALWTENWTSFYQVYGGLPYIRSAEDIAFHVTLFIARNGSYVNYYMYHGGTNFGRTGSAYVITGYYDQAPLDEYGLLRQPKWGHLKQLHEVIKSCSTTLLQGVQRNFTLGQLLEVYVFEEEKGECVAFLINNDRDNKATVQFRNSSYELLPKSISILPDCQNVTFSTANVNTTSNRRIISPKQNFSSVDDWQQFQDVISNFDNTSLKSDSLLEQMNTTKDKSDYLWYTLRFEYNLSCSKPTLSVQSAAHVAHAFVNNTYIGGEHGNHDVKSFTLELPVTVNQGTNNLSILSVMVGLPDSGAFLERRFAGLISVELQCSEQESLNLTNSTWGYQVGLMGEQLQVYKEQNNSDTGWSQLGNVMEQTLFWYKTTFDTPEGDDPVVLDLSSMGKGEAWVNGESIGRYWILFHDSKGNPSQSLYHVPRSFLKDSGNVLVLLEEGGGNPLVASSANVSYDGRSLIIDAQRKLLISASIHYPRSVPAMWPGLVQTAKEGGVDVIETYVFWNGHELSPGNYYFGGRFDLVKFAQTVQQAGMYLILRIGPFVAAEWNFGGVPVWLHYVPGTVFRTYNQPFMYHMQKFTTYIVNLMKQEKLFASQGGPIILAQAKNEYGYYENFYKEDGKKYALWAAKMAVSQNTGVPWIMCQQWDAPDPVIDTCNSFYCDQFTPTSPNRPKIWTENWPGWFKTFGGRDPHRPAEDVAFSVARFFQKGGSVHNYYMYHGGTNFGRTAGGPFITTSYDYDAPVDEYGLPRLPKWGHLKELHRAIKLCEHVLLNGKSVNISLGPSVEADVYTDSSGACAAFISNVDDKNDKTVEFRNASFHLPAWSVSILPDCKNVVFNTAKVTSQTSVVAMVPESLQQSDKVVNSFKWDIVKEKPGIWGKADFVKNGFVDLINTTKDTTDYLWHTTSIFVSENEEFLKKGNKPVLLIESTGHALHAFVNQEYEGTGSGNGTHAPFTFKNPISLRAGKNEIALLCLTVGLQTAGPFYDFVGAGLTSVKIKGLNNGTIDLSSYAWTYKIGVQGEYLRLYQGNGLNNVNWTSTSEPPKMQPLTWYKAIVDAPPGDEPVGLDMLHMGKGLAWLNGEEIGRYWPRKSEFKSEDCVKECDYRGKFNPDKCDTGCGEPTQRWYHVPRSWFKPSGNILVLFEEKGGDPEKIKFVRRKVSGACALVAEDYPSVALVSQGEDKIQSNKNIPFARLACPGNTRISAVKFASFGSPSGTCGSYLKGDCHDPNSSTIVEKACLNKNDCVIKLTEENFKSNLCPGLSRKLAVEAVCS 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01400 1520 Pfam Glycosyl hydrolases family 35 705 1010 IPR031330 -
Gma06g01400 1520 Pfam Glycosyl hydrolases family 35 33 338 IPR031330 -
Gma06g01400 1520 SUPERFAMILY Galactose-binding domain-like 1260 1418 IPR008979 -
Gma06g01400 1520 PRINTS Glycosyl hydrolase family 35 signature 709 726 IPR001944 GO:0004553|GO:0005975
Gma06g01400 1520 PRINTS Glycosyl hydrolase family 35 signature 785 804 IPR001944 GO:0004553|GO:0005975
Gma06g01400 1520 PRINTS Glycosyl hydrolase family 35 signature 921 936 IPR001944 GO:0004553|GO:0005975
Gma06g01400 1520 PRINTS Glycosyl hydrolase family 35 signature 978 994 IPR001944 GO:0004553|GO:0005975
Gma06g01400 1520 PRINTS Glycosyl hydrolase family 35 signature 1294 1308 IPR001944 GO:0004553|GO:0005975
Gma06g01400 1520 PRINTS Glycosyl hydrolase family 35 signature 730 748 IPR001944 GO:0004553|GO:0005975
Gma06g01400 1520 PRINTS Glycosyl hydrolase family 35 signature 842 857 IPR001944 GO:0004553|GO:0005975
Gma06g01400 1520 PRINTS Glycosyl hydrolase family 35 signature 958 973 IPR001944 GO:0004553|GO:0005975
Gma06g01400 1520 PRINTS Glycosyl hydrolase family 35 signature 1321 1337 IPR001944 GO:0004553|GO:0005975
Gma06g01400 1520 SUPERFAMILY Galactose-binding domain-like 1073 1225 IPR008979 -
Gma06g01400 1520 Gene3D - 438 571 - -
Gma06g01400 1520 PANTHER BETA-GALACTOSIDASE 10 697 1512 - -
Gma06g01400 1520 Gene3D - 1429 1520 IPR043159 -
Gma06g01400 1520 SUPERFAMILY Galactose-binding domain-like 402 558 IPR008979 -
Gma06g01400 1520 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 172 184 IPR019801 GO:0004553|GO:0005975
Gma06g01400 1520 ProSiteProfiles SUEL-type lectin domain profile. 1438 1520 IPR000922 GO:0030246
Gma06g01400 1520 Gene3D - 1274 1411 - -
Gma06g01400 1520 Gene3D - 572 699 - -
Gma06g01400 1520 PANTHER BETA-GALACTOSIDASE RELATED 697 1512 IPR001944 GO:0004553|GO:0005975
Gma06g01400 1520 PANTHER BETA-GALACTOSIDASE RELATED 24 691 IPR001944 GO:0004553|GO:0005975
Gma06g01400 1520 SUPERFAMILY (Trans)glycosidases 698 1015 IPR017853 -
Gma06g01400 1520 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Gma06g01400 1520 Pfam Beta-sandwich domain in beta galactosidase 1018 1089 IPR041392 -
Gma06g01400 1520 Gene3D Glycosidases 24 344 - -
Gma06g01400 1520 PANTHER BETA-GALACTOSIDASE 10 24 691 - -
Gma06g01400 1520 Pfam Galactose binding lectin domain 1442 1519 IPR000922 GO:0030246
Gma06g01400 1520 SUPERFAMILY Galactose-binding domain-like 577 695 IPR008979 -
Gma06g01400 1520 Gene3D Glycosidases 700 1014 - -
Gma06g01400 1520 SUPERFAMILY (Trans)glycosidases 26 343 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01400 Gma-Chr6 13240847 13260944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01400 7 692 Glycoside Hydrolase AT5G63810 46.944 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01400 - - cqi:110735856 2257.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01400 06 13240847 13260944 Gma06g01400 06 13240847 13260944 ECH
Gma04g02015 04 50587570 50612708 Gma06g01400 06 13240847 13260944 GST