Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02015 ATGGAGAAGTGGGTGGCTTTGGTGTTGCTGTTGGTGTTTTGGAAAATAAGGGAAGGTTTTGGCGTTAAAGCTGAGGAGGTGACATACGATGGAAGGTCTCTCATTATTGATGGCCAAAGAAAAATTCTGTTCTCCGGTTCAATTCATTATCCTCGCAGCACTCCTCAGATGTGGCCAGATTTGATAGCGAAAGCAAAACAAGGAGGACTGGATGTGATTCAGACCTATGTGTTTTGGAATTTACACGAGCCCCAACCCGGAATGTATGATTTCAGAGGTAGATATGACTTGGTGGGATTCATAAAAGAAATCCAAGCTCAAGGGCTGTATGTTTGCCTCAGGATTGGACCTTTCATTCAGAGTGAATGGAAATACGGGGGATTTCCTTTCTGGTTGCATGATGTCCCTGGCATTGTCTACCGGACGGATAATGAATCATTCAAGTTCTACATGCAAAATTTTACGACAAAAATTGTGAACATGATGAAAGAAGAGGGCTTATATGCTTCCCAGGGAGGCCCAATTATATTGTCACAGATTGAAAATGAATACCAAAACATCCAAAAGGCATTTGGCACAGCAGGATCACAGTATGTTCAATGGGCTGCAAAAATGGCGGTGGGCCTTAACACAGGCGTTCCATGGGTTATGTGCAAGCAAACTGATGCTCCTGATCCTGTGATCAACACATGCAACGGCATGAGATGCGGAGAAACTTTTACTGGACCAAATTCCCCCAATAAACCTGCCTTGTGGACTGAGAACTGGACATCTTTCTATCAAGTGTATGGTGGACTGCCATACATAAGGTCTGCTGAAGATATTGCATTTCATGTCACCCTATTCATTGCACGAAATGGAAGCTATGTCAACTATTACATGTACCATGGAGGAACCAACTTTGGGAGAACAGCCTCTGCTTATGTTATAACAGGCTATTATGATCAAGCCCCACTTGATGAATATGGCAAGCAACCCAAGTGGGGACATCTCAAGCAGTTACATGAAGTAATCAAGTCTTGCTCTACCACATTATTACAAGGAGTGCAGAGGAACTTCTCTTTAGGTCAACTACAGGAAGGTTATGTCTTTGAAGAAGAAAAAGGAGAATGTGTTGCATTCCTTAAAAACAATGATAGAGATAATAAGGTTACTGTACAATTTCGCAACAGATCATACGAATTACTCCCCAGGTCAATAAGTATCTTACCAGATTGTCAAAATGTAGCTTTCAACACAGCAAATGTAAATACAACAAGCAACAGAAGGATCATAAGTCCTAAACAAAACTTCAGCTCATTGGATGATTGGAAGCAATTCCAAGATGTCATTCCATACTTTGATAACACCTCACTAAGATCAGATTCATTACTTGAGCAAATGAATACAACCAAAGACAAATCGGATTACCTTTGGTATACTCTTAGGTTTGAATATAATTTATCTTGCAGAAAACCAACACTTAGTGTTCAGTCTGCCGCTCATGTTGCCCATGCTTTTATAAACAACACATACATAGGAGGGGAACATGGAAATCATGATGTGAAATCATTCACCTTAGAGCTCCCGGTTACAGTAAATCAAGGGACAAACAACCTTTCTATACTCAGCGCTAtggttgggcttccggattcaggggcattTCTTGAAAGAAGGTTCGCTGGTTTAATCAGTGTGGAACTTCCGTGCAGCGAACAAGAGTCTCTTAATTTGACCAATTCCACGTGGGGATATCAGGTTGGATTACTGGGGGAGCAATTACAAGTATATAAAAAACAAAATAACAGTGATATTGGATGGAGTCAACTGGGGAATATTATGGAACAATTGCTCATTTGGTATAAGACCACATTTGATACACCAGAGGGAGATGACCCTGTTGTTTTGGACCTTAGCTCAATGGGAAAAGGTGAGGCCTGGGTAAATGAACAAAGCATCGGTCGCTATTGGATCTTGTTTCATGATTCCAAAGGCAACCCTTCACAATCACTGTATCACGTGCCTCGGTCTTTCCTTAAAGATACTGGAAACGTTTTGGTTTTGGTGGAGGAAGGTGGTGGGAACCCTCTTGTGGCCTTATCTGGGAATGTCAGCTACGACGGTCGCTCGCTTCTCATTGATGGCCAACGCAAGCTTCTTATCTCTGCTTCCATTCATTACCCACGCAGCGTTCCCGCGATGTGGCCTGGTCTCGTTCAAACAGCCAAGGAAGGAGGGGTGGATGTGATTGAAACCTATGTTTTTTGGAATGGCCATGAGCTTTCTCCAGGCAACTATTACTTTGGAGGAAGGTTTGATCTAGTCAAGTTTGCGAAGACTGTTCAGCAGGCTGGGATGTACTTGATTCTTCGAATAGGCCCATTTGTTGCTGCAGAATGGAATTTTGGTGGTGTACCGGTATGGCTGCATTATGTTCCAGGCACGGTATTCCGGACTTACAATCAGCCTTTTATGTATCATATGCAGAAGTTTACAACATACATAGTGAACCTTATGAAACAAGAGAAGCTTTTTGCTTCACAAGGGGGTCCCATAATCTTATCTCAGATAGAAAATGAATATGGGTACTATGAAAATTTTTATAAGGAGGATGGTAAGAAATATGCCTTGTGGGCTGCAAAGATGGCTGTTTCTCAAAATACAGGTGTCCCTTGGATAATGTGCCAACAATGGGATGCTCCAGATCCTGTGATTGATACATGCAATTCATTCTACTGTGACCAATTTACACCTACTTCTCCAAACAGGCCCAAAATTTGGACTGAGAACTGGCCTGGATGGTTTAAAACTTTTGGGGGAAGAGATCCTCACAGGCCAGCAGAAGATGTTGCATTTTCTGTTGCTCGTTTCTTCCAGAAAGGTGGAAGTGTACATAATTACTACATGTATCATGGAGGAACAAATTTTGGGCGTACAGCAGGTGGTCCATTCATTACTACAAGTTATGACTATGATGCCCCAGTAGATGAGTATGGGTTACCTAGACTTCCAAAATGGGGACATCTTAAGGAACTTCACAGAGCTATCAAGTTATGTGAGCACGTATTGCTTAATGGTAAATCAGTTAATATCTCCCTTGGTCCTTCTGTGGAGGCTGATGTCTATACTGACTCATCAGGAGCATGTGCGGCCTTTATTTCTAATGTTGATGATAAAAATGATAAGACAGTGGAATTTCGAAATGCATCATATCACTTGCCAGCTTGGTCAGTTAGCATTCTTCCTGATTGCAAGAATGTAGTATTCAACACAGCTAAGGTTACTTCCCAGACAAATGTAGTTGCAATGATTCCCGAGAGTTTGCAGCAATCAGATAAAGGTGTAAATTCTCTTAAATGGGACATAGTGAAGGAGAAGCCAGGAATCTGGGGGAAGGCAGACTTTGTCAAAAGTGGTTTTGTTGATCTCATCAATACTACCAAAGATACCACTGACTACCTGTGGCATACAACAAGTATATTTGTAAGTGAGAATGAAGAGTTCTTAAAGAAGGGAAGCAAACCAGTCCTTCTAATTGAATCCACAGGTCATGCTCTCCATGCTTTTGTGAACCAAGAATATCAAGGTACTGGTACTGGAAATGGTACACATTCACCATTCTCTTTTAAGAATCCCATCTCCCTGAGGGCAGGGAAAAATGAAATTGCTTTGTTGTGCTTGACCGTTGGCTTACAGACAGCAGGACCATTTTATGACTTCATAGGGGCAGGACTAACTAGTGTGAAGATCAAGGGACTGAAAAATGGGACAATAGACTTGTCTTCTTATGCCTGGACTTACAAGATTGGAGTGCAAGGAGAATATCTAAGGTTATACCAGGGAAATGGGTTGAATAAAGTGAACTGGACATCTACTTCAGAACCACAAAAAATGCAGCCATTGACATGGTACAAGGCAATTGTGGATGCTCCGCCTGGGGATGAACCAGTTGGATTGGATATGTTACATATGGGAAAGGGTCTAGCCTGGTTAAATGGAGAAGAAATAGGAAGATATTGGCCTAGGAAAAGTGAATTCAAGAGTGAAGACTGTGTGAAAGAATGCGATTACAGAGGCAAATTTAATCCTGACAAATGTGACACTGGTTGTGGAGAACCTACACAGAGATGGTACCATGTTCCACGATCTTGGTTCAAGCCATCTGGAAATATTCTTGTTCTTTTTGAGGAGAAAGGTGGAGATCCAGAAAAGATTAAGTTTGTGAGACGGAAAGTATCTGGAGCTTGTGCCCTTGTTGCTGAGGATTACCCCTCTGTTGGACTCCTTTCCCAGGGTGAAGATAAAATACAGAATAACAAAAACGTTCCTTTTGCCCATTTGACATGCCCCAGCAACACTCGTATATCTGCTGTGAAGTTTGCTAGCTTTGGAACCCCCTCTGGGTCATGTGGATCTTACCTCAAGGGAGATTGCCATGATCCCAATTCTAGCACAATTGTTGAGAAGGCATGCCTAAACAAAAACGACTGTGTCATAAAATTAACTGAAGAGAATTTCAAAACCAACTTGTGTCCTGGTTTATCAAGGAAACTTGCAGTGGAAGCAGTCTGTAGTTGA 4557 0.4161 MEKWVALVLLLVFWKIREGFGVKAEEVTYDGRSLIIDGQRKILFSGSIHYPRSTPQMWPDLIAKAKQGGLDVIQTYVFWNLHEPQPGMYDFRGRYDLVGFIKEIQAQGLYVCLRIGPFIQSEWKYGGFPFWLHDVPGIVYRTDNESFKFYMQNFTTKIVNMMKEEGLYASQGGPIILSQIENEYQNIQKAFGTAGSQYVQWAAKMAVGLNTGVPWVMCKQTDAPDPVINTCNGMRCGETFTGPNSPNKPALWTENWTSFYQVYGGLPYIRSAEDIAFHVTLFIARNGSYVNYYMYHGGTNFGRTASAYVITGYYDQAPLDEYGKQPKWGHLKQLHEVIKSCSTTLLQGVQRNFSLGQLQEGYVFEEEKGECVAFLKNNDRDNKVTVQFRNRSYELLPRSISILPDCQNVAFNTANVNTTSNRRIISPKQNFSSLDDWKQFQDVIPYFDNTSLRSDSLLEQMNTTKDKSDYLWYTLRFEYNLSCRKPTLSVQSAAHVAHAFINNTYIGGEHGNHDVKSFTLELPVTVNQGTNNLSILSAMVGLPDSGAFLERRFAGLISVELPCSEQESLNLTNSTWGYQVGLLGEQLQVYKKQNNSDIGWSQLGNIMEQLLIWYKTTFDTPEGDDPVVLDLSSMGKGEAWVNEQSIGRYWILFHDSKGNPSQSLYHVPRSFLKDTGNVLVLVEEGGGNPLVALSGNVSYDGRSLLIDGQRKLLISASIHYPRSVPAMWPGLVQTAKEGGVDVIETYVFWNGHELSPGNYYFGGRFDLVKFAKTVQQAGMYLILRIGPFVAAEWNFGGVPVWLHYVPGTVFRTYNQPFMYHMQKFTTYIVNLMKQEKLFASQGGPIILSQIENEYGYYENFYKEDGKKYALWAAKMAVSQNTGVPWIMCQQWDAPDPVIDTCNSFYCDQFTPTSPNRPKIWTENWPGWFKTFGGRDPHRPAEDVAFSVARFFQKGGSVHNYYMYHGGTNFGRTAGGPFITTSYDYDAPVDEYGLPRLPKWGHLKELHRAIKLCEHVLLNGKSVNISLGPSVEADVYTDSSGACAAFISNVDDKNDKTVEFRNASYHLPAWSVSILPDCKNVVFNTAKVTSQTNVVAMIPESLQQSDKGVNSLKWDIVKEKPGIWGKADFVKSGFVDLINTTKDTTDYLWHTTSIFVSENEEFLKKGSKPVLLIESTGHALHAFVNQEYQGTGTGNGTHSPFSFKNPISLRAGKNEIALLCLTVGLQTAGPFYDFIGAGLTSVKIKGLKNGTIDLSSYAWTYKIGVQGEYLRLYQGNGLNKVNWTSTSEPQKMQPLTWYKAIVDAPPGDEPVGLDMLHMGKGLAWLNGEEIGRYWPRKSEFKSEDCVKECDYRGKFNPDKCDTGCGEPTQRWYHVPRSWFKPSGNILVLFEEKGGDPEKIKFVRRKVSGACALVAEDYPSVGLLSQGEDKIQNNKNVPFAHLTCPSNTRISAVKFASFGTPSGSCGSYLKGDCHDPNSSTIVEKACLNKNDCVIKLTEENFKTNLCPGLSRKLAVEAVCS 1518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02015 1518 SUPERFAMILY (Trans)glycosidases 696 1013 IPR017853 -
Gma04g02015 1518 SUPERFAMILY Galactose-binding domain-like 400 556 IPR008979 -
Gma04g02015 1518 PRINTS Glycosyl hydrolase family 35 signature 728 746 IPR001944 GO:0004553|GO:0005975
Gma04g02015 1518 PRINTS Glycosyl hydrolase family 35 signature 956 971 IPR001944 GO:0004553|GO:0005975
Gma04g02015 1518 PRINTS Glycosyl hydrolase family 35 signature 707 724 IPR001944 GO:0004553|GO:0005975
Gma04g02015 1518 PRINTS Glycosyl hydrolase family 35 signature 840 855 IPR001944 GO:0004553|GO:0005975
Gma04g02015 1518 PRINTS Glycosyl hydrolase family 35 signature 1292 1306 IPR001944 GO:0004553|GO:0005975
Gma04g02015 1518 PRINTS Glycosyl hydrolase family 35 signature 783 802 IPR001944 GO:0004553|GO:0005975
Gma04g02015 1518 PRINTS Glycosyl hydrolase family 35 signature 1319 1335 IPR001944 GO:0004553|GO:0005975
Gma04g02015 1518 PRINTS Glycosyl hydrolase family 35 signature 919 934 IPR001944 GO:0004553|GO:0005975
Gma04g02015 1518 PRINTS Glycosyl hydrolase family 35 signature 976 992 IPR001944 GO:0004553|GO:0005975
Gma04g02015 1518 PANTHER BETA-GALACTOSIDASE RELATED 24 690 IPR001944 GO:0004553|GO:0005975
Gma04g02015 1518 PANTHER BETA-GALACTOSIDASE RELATED 694 1510 IPR001944 GO:0004553|GO:0005975
Gma04g02015 1518 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 172 184 IPR019801 GO:0004553|GO:0005975
Gma04g02015 1518 ProSiteProfiles SUEL-type lectin domain profile. 1432 1518 IPR000922 GO:0030246
Gma04g02015 1518 SUPERFAMILY Galactose-binding domain-like 575 689 IPR008979 -
Gma04g02015 1518 Pfam Galactose binding lectin domain 1440 1517 IPR000922 GO:0030246
Gma04g02015 1518 Pfam Glycosyl hydrolases family 35 703 1008 IPR031330 -
Gma04g02015 1518 Pfam Glycosyl hydrolases family 35 33 336 IPR031330 -
Gma04g02015 1518 Gene3D Glycosidases 22 342 - -
Gma04g02015 1518 Gene3D Glycosidases 697 1012 - -
Gma04g02015 1518 SUPERFAMILY Galactose-binding domain-like 1258 1416 IPR008979 -
Gma04g02015 1518 Gene3D - 1268 1409 - -
Gma04g02015 1518 Gene3D - 574 696 - -
Gma04g02015 1518 Gene3D - 1428 1518 IPR043159 -
Gma04g02015 1518 Pfam Beta-sandwich domain in beta galactosidase 1016 1087 IPR041392 -
Gma04g02015 1518 Pfam Beta-sandwich domain in beta galactosidase 345 416 IPR041392 -
Gma04g02015 1518 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 842 854 IPR019801 GO:0004553|GO:0005975
Gma04g02015 1518 PANTHER BETA-GALACTOSIDASE 10 24 690 - -
Gma04g02015 1518 PANTHER BETA-GALACTOSIDASE 10 694 1510 - -
Gma04g02015 1518 SUPERFAMILY (Trans)glycosidases 26 341 IPR017853 -
Gma04g02015 1518 SUPERFAMILY Galactose-binding domain-like 1071 1222 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02015 Gma-Chr4 50587570 50612708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02015 5 690 Glycoside Hydrolase AT5G63810 46.069 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02015 - - cqi:110735856 2234.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02015 04 50587570 50612708 Gma04g02015 04 50587570 50612708 ECH
Gma04g02015 04 50587570 50612708 Gma06g01400 06 13240847 13260944 GST