Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01369 ATGTTTCTTATAGGCATAGCCATTAGCCACACACATGTTTCTTTAGCAGAATGTGACAATGTGAAGGACTATTGCCCTACAATTCCTCCCCAAAAGCAAACCATATTCCTCAATGGCTTCCCCTGCGAGAACCCAAATAACACAATTGCACATGATTTCAAGAGCATGGAACTAAGCAAGCCAGGTTCAAGAGACAAGTTAGGTTCATTAGTTAAAATTGTTACAGCTTCCAAGTTTCCGGGGCTCAACGCACTCGGCCTCGCGATTGGTAGAAGTGACATTGAAGTGGATGGCCTTGTGAACCTCCACAATCATCCAAGAGCCACTGAGATGATCTATGTCAGCCAAGGTGATGTAGTCGCTGCGTTTCTTGACACTCGGAACCAGCTCTTCCAGAAGATTCTCAGGGCTGGTGATGTGTTTGTGATCCCCAAAGGGTTGTTTCACTTCTTGCTGAATCGTGGTGCACAAGTTGCAACTGTGTTCTCTGTGTTTAACAGCCAAAATCCTGGGTCAGGACCACTCACTTCCATACCTTCTGACACGTTGGAATCGGTTCAGAAGATCAAGAGGAAGGCCATTGCATCAATTACATTCTGGAGAGTCATACCATCTTGGAAGGACTTTAACCAATGGATCAGAGTCATAATCATTGTATCAGAGTTTTAG 669 0.4469 MFLIGIAISHTHVSLAECDNVKDYCPTIPPQKQTIFLNGFPCENPNNTIAHDFKSMELSKPGSRDKLGSLVKIVTASKFPGLNALGLAIGRSDIEVDGLVNLHNHPRATEMIYVSQGDVVAAFLDTRNQLFQKILRAGDVFVIPKGLFHFLLNRGAQVATVFSVFNSQNPGSGPLTSIPSDTLESVQKIKRKAIASITFWRVIPSWKDFNQWIRVIIIVSEF 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01369 222 Gene3D Jelly Rolls 16 199 IPR014710 -
Gma06g01369 222 Pfam Cupin 65 177 IPR006045 -
Gma06g01369 222 ProSitePatterns Germin family signature. 98 111 IPR019780 GO:0030145
Gma06g01369 222 PRINTS Germin signature 166 181 IPR001929 GO:0030145
Gma06g01369 222 PRINTS Germin signature 103 123 IPR001929 GO:0030145
Gma06g01369 222 PRINTS Germin signature 133 153 IPR001929 GO:0030145
Gma06g01369 222 CDD cupin_OxOx 19 171 - -
Gma06g01369 222 SUPERFAMILY RmlC-like cupins 61 191 IPR011051 -
Gma06g01369 222 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 5 197 - -
Gma06g01369 222 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 4 5 197 - -
Gma06g01369 222 SMART Cupin_1_3 70 195 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01369 Gma-Chr6 12869731 12870645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01369 11 192 Miscellaneous Gene Families AT3G05930 35.000 1.65e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01369 - - gmx:100809017 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02050 04 50954768 50955328 Gma06g01369 06 12869731 12870645 GST