Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02050 ATGATCTATGTCAGACAAGGTGAGGTGGTGGCTGCGTTTCTCAACACTCAGAACCAGCTCTTCCAAAAGAATCTCAGGGCTGGTGATGTGTTTGTGATCCCCAAAGGCTTGTTTCACTTCTTGTTGAATCGTGGTGCACAAGTTGCAACTGTGTTCTCTGCGTTTAACAGCCAAAATCCCGGGTTGGGATCACTCACTTCTATTCCTTCTGACACCTTGGAATCGGTTGAGAAGCTTAAGAGGAAGGTTATCTCACTTTCTGAAGTAGAACTTAATGGTGTTAGTGATTTGACTTCTGCAGTGTTGGATATCATTCACACTTAA 324 0.4383 MIYVRQGEVVAAFLNTQNQLFQKNLRAGDVFVIPKGLFHFLLNRGAQVATVFSAFNSQNPGLGSLTSIPSDTLESVEKLKRKVISLSEVELNGVSDLTSAVLDIIHT 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02050 107 Pfam Cupin 1 72 IPR006045 -
Gma04g02050 107 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 1 93 - -
Gma04g02050 107 SUPERFAMILY RmlC-like cupins 2 74 IPR011051 -
Gma04g02050 107 SMART Cupin_1_3 1 85 IPR006045 -
Gma04g02050 107 Gene3D Jelly Rolls 1 94 IPR014710 -
Gma04g02050 107 PRINTS Germin signature 23 43 IPR001929 GO:0030145
Gma04g02050 107 PRINTS Germin signature 56 71 IPR001929 GO:0030145
Gma04g02050 107 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 4 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02050 Gma-Chr4 50954768 50955328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02050 2 82 Miscellaneous Gene Families AT3G05930 37.113 1.15e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02050 - - gmx:100819992 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02050 04 50954768 50955328 Gma06g01369 06 12869731 12870645 GST