Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01322 ATGGCTATGGAGAACGTGGGGAGTTTAGACGCGGCCATTGAGCAATTGCTGAATGCGGAGAAGCATGCGAGGCTCGCCGGCGACGTCGCCGCCACCAGAAACGCCGTCACCGAAATTTTACGGTTGTGCTTCGAAGCGCGTGCCTGGAAAACTCTCAATGACCAGATTGCTCTCTTGTCCAAACGACGTGGCCAGCTTAAGCAGGCTGTGACAGCGATGGTCCAACAGGCTATGCAATATACTGATGAGACACCGGATCTTGAAACTCGTATAGAACTCATCAAAACCTTGAACAGTGTATCTGCAGGAAAGATATACGTCGAGATTGAGAGAGCTCGGTTGATCAAGAAACTTGCAAAAATTAAGGAAGAACAAGGACTTATAGCTGAAGCTGCTGATTTGATGCAAGAAATTGCGGTGGAAACTTTTGGCGCCATGGCTAAAACTGAGAAAATCGCATTCATTCTTGAACAAGTTCGTTTGTGTCTAGACTGCCAGGATTATGTTCGTGCACAGATACTCTCAAGAAAGATTAGTACGAGAGTGTTTGACGCTGATGTTACAAAAGAAAAGAAAAAGCCTAAAGAAGGTGATAATGTTGTTGAAGAAGCTCCTGCAGATATTCCATCTCTACCAGAGTTGAAGCGGATCTACTATGAACTAATGATTCGGTATTATTCCCATAAAAATGATTATCTTGAAATTTGCCGTTGCTACAAGGCAATATATGAGATTCCATCTGTCAAAGAAAATCTTGCCGAGTGGATTCCAATCCTGAGGAAAATATGTTGGTATTTGGTTCTATCCCCGCATGATCCAATGCAGTCAAGTCTTCTCAATTCTACCTTGGAGGATAAGAATCTGTCTGAGATTCCAAACTTTAAGTTACTGTTGAAACAGTTGGTCACTATGGAGGTTATCCAGTGGACAACTCTTTGGGATTCATACAAGGATGAGTTTGAGAATCAGAGTAACTTAGGAAAGAATTTGGGTGAAAAAGCAGCTGAAGATCTGAGGGAAAGAGTAATTGAACATAATATTATTGTTATATCAAAATACTATGGAAGGACTACTTTGAAGAGACTTGCAGAGCTTTTGTGTCTCAGTGTTCAGGAAGCTGAGAAGCATCTTTCAGATATGGTTGTGTCTAAGGCATTGGTGGCGAAGATTGATAGACCCATGGGAATAGTTTGTTTAAGAAGTTCCCTGTCACTATTAAAAGTTATAGGTGAACCCCAATATAGATGTGATTTTGGACTGAAGGTGACTTAA 1272 0.4167 MAMENVGSLDAAIEQLLNAEKHARLAGDVAATRNAVTEILRLCFEARAWKTLNDQIALLSKRRGQLKQAVTAMVQQAMQYTDETPDLETRIELIKTLNSVSAGKIYVEIERARLIKKLAKIKEEQGLIAEAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDCQDYVRAQILSRKISTRVFDADVTKEKKKPKEGDNVVEEAPADIPSLPELKRIYYELMIRYYSHKNDYLEICRCYKAIYEIPSVKENLAEWIPILRKICWYLVLSPHDPMQSSLLNSTLEDKNLSEIPNFKLLLKQLVTMEVIQWTTLWDSYKDEFENQSNLGKNLGEKAAEDLRERVIEHNIIVISKYYGRTTLKRLAELLCLSVQEAEKHLSDMVVSKALVAKIDRPMGIVCLRSSLSLLKVIGEPQYRCDFGLKVT 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01322 423 SUPERFAMILY "Winged helix" DNA-binding domain 332 401 IPR036390 -
Gma06g01322 423 SMART PINT_4 333 412 IPR000717 -
Gma06g01322 423 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12 HOMOLOG A-LIKE 3 402 - -
Gma06g01322 423 Pfam PCI domain 292 399 IPR000717 -
Gma06g01322 423 ProSiteProfiles PCI domain profile. 234 404 IPR000717 -
Gma06g01322 423 Gene3D - 331 404 IPR036388 -
Gma06g01322 423 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 333 412 - -
Gma06g01322 423 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 3 402 IPR040134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01322 Gma-Chr6 12435656 12440686 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01322 K03035 - gmx:100801382 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02089 04 51365577 51371287 Gma06g01322 06 12435656 12440686 GST