Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01306 ATGTGCACTAGGAGTTACTTGTATTGCATCGGTGGGCAAGGCATGTCGTGGTCCTCTGGTTCAGAATCAGAAGAGTCAGCGAGCCCCAACAACCTAATCCCGTCCCTCCCAGACGACGTCGCATTGAACTGCCTAGGACGCATCCCTCGGTCCCAGCACCCAACCCTCTCCCTGGTCTCCAAACCCATCCGCACCCTCCTCTCTTCCCCAATCCTCTTCACCACGCGAACCCTCCTCCAATGCACCCAACCCCTCCTCTACCTCACTCTCCGCTCACGCCACTCCTCTCTCCTCCAATTCTTCACGCTCCACCGCACAAACCCTAATAACCCCCTCCTCGCTCCCCTTCCCCCGATCCCCTCCCCCGCCGTCGGCTCCGCCTACGCCGTCCTCGGCCCCACCATCTACGTCCTCGGCGGCTCCATCCACGACGTCCCCTCCCCCAACGTCTGGCTCCTCGACTGCCGCTTCAACCGCTGGCTCCGCGGTCCCTCCATGCGCGTCGGCCGCGAATTCGCCGCCGCGGGAGTCCTCCACGGCAAGATCTACGTCCTCGGCGGCTGCGTCGCTGACACCTGGTCCCGCTCCGCCAATTGGGCGGAGGTCCTCGACCCCGCCACTGGCCAATGGGAGAGGGTCGCCAGTCCTACGGAGGTCCGTGAGAAGTGGATGCACGCCAGCGCCGTCGTCGGGGAGCGGATCTACGCGATGGCAGATCGCGGTGGCATCACGTACGAGCCTAGCAGCGGCGCGTGGGAGAGCGTGGGGGTAGAATTGGACCACGGGTGGAGGGGGAGGGCGTGCGTGGTGGAAGGGATTTTGTACTGCTACGATTATTTGGGGAAAATCAAAGGGTTCGATGTGGGGCGCGGGGTGTGGGAGGAGTTGAAGGGGTTGGAGAAGGGTTTGCCCAGGTTTCTGTGTGGGGCTACCATGGCTGATTTGGGTGGGAAATTGTGTGTGGTTTGGGAGTGCCAGGGGAATGAGAATGAAATGGAGATTTGGTGCGCTGAGATTGGAGTGAAGAAGAATTCGGATGGGGAATTGTGGGGTCAACTTGTTTGGTTCGGGAAGGTTCTTTCTGTTCCCAAAGGCTCTTCCATTGTCAACTGTTCTTCTGTTTCCTTGTGA 1131 0.6057 MCTRSYLYCIGGQGMSWSSGSESEESASPNNLIPSLPDDVALNCLGRIPRSQHPTLSLVSKPIRTLLSSPILFTTRTLLQCTQPLLYLTLRSRHSSLLQFFTLHRTNPNNPLLAPLPPIPSPAVGSAYAVLGPTIYVLGGSIHDVPSPNVWLLDCRFNRWLRGPSMRVGREFAAAGVLHGKIYVLGGCVADTWSRSANWAEVLDPATGQWERVASPTEVREKWMHASAVVGERIYAMADRGGITYEPSSGAWESVGVELDHGWRGRACVVEGILYCYDYLGKIKGFDVGRGVWEELKGLEKGLPRFLCGATMADLGGKLCVVWECQGNENEMEIWCAEIGVKKNSDGELWGQLVWFGKVLSVPKGSSIVNCSSVSL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01306 376 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP6 21 359 - -
Gma06g01306 376 SUPERFAMILY F-box domain 26 109 IPR036047 GO:0005515
Gma06g01306 376 Pfam Kelch motif 123 167 IPR006652 GO:0005515
Gma06g01306 376 Pfam Kelch motif 172 216 IPR006652 GO:0005515
Gma06g01306 376 SUPERFAMILY Kelch motif 86 357 IPR015915 GO:0005515
Gma06g01306 376 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 21 359 - -
Gma06g01306 376 SMART kelc_smart 181 233 IPR006652 GO:0005515
Gma06g01306 376 SMART kelc_smart 134 180 IPR006652 GO:0005515
Gma06g01306 376 Gene3D - 77 347 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01306 Gma-Chr6 12263753 12265196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01306 36 360 Miscellaneous Gene Families AT4G33900 37.784 2.60e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01306 - - gmx:100795539 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02107 04 51551280 51552492 Gma06g01306 06 12263753 12265196 GST