Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02107 ATGATGTCGTGGGCGTGTCGTTCGGAAGAGTCAGAGAGCCCCAACAACCTAATCCCGTACCTCCCAAACGACGTCGCATTGAACTGCCTAGCACGCATCCCTCGTTCCCACCACCCAACCCTCTCGCTTGTGTCGAAACCAATCCGAAGCCTCCTCTATTCCCCTCTCTTGTTCACCACGCGCTCCCTCCTCCAATGCACCCAACCCCTCCTCTACCTCACTCTCCGCTCACGCGATTCCTCCCTCCAGTGGTTCACGCTCCACCGCACAAACCCTAACCCCCTCCTTGCTCCTCTTCCTCCCATCCCCTCCCCCGCCGTTGGCTCCGCCTACGCCGTCCTTGGCCCCACCATCTACGTCCTCGGCGGCTCCATCCAAGACGTCCCCTCCTCCCACGTCTGGCTCCTCGACTGCCGCTTCCACCGCTGGCTCCGTGGTCCCCCCATGCGCGTCGCCCGCGAGTTCGCCGCCGCCGGCGTCCTCCACGGCAAGATCTACGTCCTCGGAGGCTGCGTCGCCGACACCTGGTCCCGCTCCGCCAACTGGGCAGAGGTCCTTGACCCCGCCTCGGGCCGGTGGGAGAGGGTCGCCAGTCCGACGGAGGTCCGGGAGAAGTGGATGCACGCCAGCGCCGTCGTCGGGGACCGAATCTACGCGATGGCGGACCGCGGCGGCATCGCTTTCGAGCCACGCAGCTGCGCGTGGGAGAGCGTGGGGGGAGAATTGGACCACGGGTGGAGGGGGAGGGCGTGCGTGGTGGAGGGAATCTTATACTGCTACGACTACTTGGGGAAAATCAAAGGGTTCGATGTGGGGCGCGGGGTGTGGGAGGAGCTGAAGGGGTTGGAGAATGCTTTGCCGAGGTTTTTGTGTGGGGCCACCATGGCTGATTTGGGTGGGAAACTGTGCGTGGTTTGGGAGTGCCAATGCAATGGGAAGGAGATGGAGATTTGGTGCGCGGAGATTGGGGTGAAGAAGAATTCGGATGGGGAATTGTGGGGTCAACTTGGTTGGTTTGGGAAGGAGCTGCTCAAGCAGTACTACGCCTGGAAGTGA 1056 0.6278 MMSWACRSEESESPNNLIPYLPNDVALNCLARIPRSHHPTLSLVSKPIRSLLYSPLLFTTRSLLQCTQPLLYLTLRSRDSSLQWFTLHRTNPNPLLAPLPPIPSPAVGSAYAVLGPTIYVLGGSIQDVPSSHVWLLDCRFHRWLRGPPMRVAREFAAAGVLHGKIYVLGGCVADTWSRSANWAEVLDPASGRWERVASPTEVREKWMHASAVVGDRIYAMADRGGIAFEPRSCAWESVGGELDHGWRGRACVVEGILYCYDYLGKIKGFDVGRGVWEELKGLENALPRFLCGATMADLGGKLCVVWECQCNGKEMEIWCAEIGVKKNSDGELWGQLGWFGKELLKQYYAWK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02107 351 SUPERFAMILY F-box domain 11 101 IPR036047 GO:0005515
Gma04g02107 351 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP6 8 339 - -
Gma04g02107 351 SUPERFAMILY Kelch motif 77 326 IPR015915 GO:0005515
Gma04g02107 351 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 8 339 - -
Gma04g02107 351 SMART kelc_smart 164 216 IPR006652 GO:0005515
Gma04g02107 351 SMART kelc_smart 117 163 IPR006652 GO:0005515
Gma04g02107 351 Pfam Kelch motif 106 150 IPR006652 GO:0005515
Gma04g02107 351 Pfam Kelch motif 153 199 IPR006652 GO:0005515
Gma04g02107 351 Gene3D - 62 330 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02107 Gma-Chr4 51551280 51552492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02107 21 344 Miscellaneous Gene Families AT4G33900 36.364 1.23e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02107 - - gmx:100798508 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02107 04 51551280 51552492 Gma06g01306 06 12263753 12265196 GST