Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01106 ATGCCACCAACAGAGTCATCTACTTTTGAGTCTGAGAGGGAACCTGTGAGATATGTGCACACAGTTTCAGAGTCAGGTCGACTTCTTCCTTCAGCGAGCCGCTGGAACTCCATAGCACTAGACTTTAAACTTGCTCCTAATTCTTCCACCGCCTATGAATCTATCCCTTCACAATATCCAAAATCTGTTGACTTCAATCTTGCTATCACTGACAGGAAGCACTTTCATATTTTTATTTTTGTTTTGGTAGCAATAATTTTTGCCATCTTGGCAGCTGTTCTGCTGGCACACTTTTTACCTCAGAAGCACAAGCATCAAGGGTCTTCAATCAATCTCAAACTGGCAATAAACCAGGCTCTAACGTTTTATGATGCTCAAAAATCTGGACACTATCCAAGGAACAGTCCAGTGAAATTTAGAGGAGATTCAGGATTACAGGATGGGAATTTGGCTAAGACTGATCTTACTGGTGGATTTTATGATTCTGGCAACAACATTAAGTTTACCTTCACCACAGCTTATACTATGACCTTGTTGAGTTGGACTGTTATTGAATATCATAGTAAATATGCTGATATTGGTGAGCTTGATCATGTGAGGGACATCATCAGATGGGGTAGTGACTACCTGCTCAAGGTGTTCATTCCCCCAAGTTCAACAGCTGGATCAAACCTTACACTGTATTCCCAGGCAAGTTATAATTTTTTTAATAATAACAATGAGCAAAATGATGTGAGTTGCTGGCAACGACCTGAAGATATGACATATGAGAGACCAGTTTCAATTTGTGATGCCTCTGCTTCAGATTTAGCTGGTGAAATTGTGGCAGCATTATCTGCATCATCGATGGTATTTGAAGAAGACAAGGATTACTCAAGGAGACTTATCCAAGCAGCAGAAAGCCTCTTTGAGGCGATCACAAGTGAAGATCCTACAGAACACGGGACCTACACCATGGTTGATGCATGTGGAAAACAAGCAAGAATGCTTTATAACTCAACTAGCTACAAAGATGAGTTGGCTTGGGGAGCAACTTGGTTATTTCTTGCTACTGAAAACGCTGATTACCTTGCAACTGCAACTGAAATTTTTTTATCAGCCAAGAGTGATGAACCAAGTGTTGACAAAGGGGTTGTTTATTGGAATAACAAGCTCAATGCTGTGGAGATTTTGCTTACCGGTATTCGATTCTTCCGTGATCCTGGCTTCCCACATGAGGATGCTTTGAAACTCTCATCAAACTCTACCGATGCCCTCATGTGTTCTTATCTATTCAATAAATACTTTAGCAGGACACCTGGTGGATTGATTATCCTGAAACCAGATAATGGTCCATTACTCCAGTATGCTGCTACAGCATCCTTTCTCAGTAAATTGTACAGTGATTACCTTGATCATCTCAAAATGTCTGGTGCAAGTTGCAAGACTGATGCATTCTCGGTGGAAATGCTTCACGATTTTGCTACTTCTCAGGTTAGCTACATCTTGGGGCAAAACCCTATGAAAATGAGTTATTTGGTGGGCTATGGTGACAGGTTTCCTCTCCAGGTTCATCACAGAAGTGCATCAATCCCTTGGAATAACCAACCCTACCGTTGTGAAGATGGTAAGAAATGGCTAAACTCTAAAGATCCAAATCCACAGGTTCTTTTGGGAGCCATGGTGGGAGGACCAGACACTAATGACAATTTCGTGGATCAAAGGACCAACCAAAAGTTCACTGAGCCAAACATAGCAAGCAATGCTGGCTTAGTTGCAGCACTTATTGCACTTCAAGATCCTCCTTATAATTCACGTGACTTGAAAAACTCATTGTGGGGATGGACTTGA 1830 0.4148 MPPTESSTFESEREPVRYVHTVSESGRLLPSASRWNSIALDFKLAPNSSTAYESIPSQYPKSVDFNLAITDRKHFHIFIFVLVAIIFAILAAVLLAHFLPQKHKHQGSSINLKLAINQALTFYDAQKSGHYPRNSPVKFRGDSGLQDGNLAKTDLTGGFYDSGNNIKFTFTTAYTMTLLSWTVIEYHSKYADIGELDHVRDIIRWGSDYLLKVFIPPSSTAGSNLTLYSQASYNFFNNNNEQNDVSCWQRPEDMTYERPVSICDASASDLAGEIVAALSASSMVFEEDKDYSRRLIQAAESLFEAITSEDPTEHGTYTMVDACGKQARMLYNSTSYKDELAWGATWLFLATENADYLATATEIFLSAKSDEPSVDKGVVYWNNKLNAVEILLTGIRFFRDPGFPHEDALKLSSNSTDALMCSYLFNKYFSRTPGGLIILKPDNGPLLQYAATASFLSKLYSDYLDHLKMSGASCKTDAFSVEMLHDFATSQVSYILGQNPMKMSYLVGYGDRFPLQVHHRSASIPWNNQPYRCEDGKKWLNSKDPNPQVLLGAMVGGPDTNDNFVDQRTNQKFTEPNIASNAGLVAALIALQDPPYNSRDLKNSLWGWT 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01106 609 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 494 520 IPR018221 -
Gma06g01106 609 Gene3D - 107 602 IPR012341 GO:0005975
Gma06g01106 609 PANTHER ENDOGLUCANASE 26 604 - -
Gma06g01106 609 Pfam Glycosyl hydrolase family 9 115 588 IPR001701 GO:0004553|GO:0005975
Gma06g01106 609 SUPERFAMILY Six-hairpin glycosidases 113 594 IPR008928 GO:0005975
Gma06g01106 609 PANTHER ENDO-1,4-BETA-GLUCANASE 26 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01106 Gma-Chr6 10365488 10368063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01106 61 591 Glycoside Hydrolase AT5G49720 44.751 1.81e-141 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01106 K01179 - gmx:100805472 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01106 06 10365488 10368063 Gma06g01106 06 10365488 10368063 ECH
Gma04g02295 04 53402512 53404845 Gma06g01106 06 10365488 10368063 GST