Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02295 ATGAGAGCGACACTGAGATATGTGCACACAGTTTCTGAGGCAGGTCGCCTTCTTCCATCCGCTAGCCGCTGGAACTTCATAGTACTTGACTTTAAACTTGCTCCTAATTCTTCCACTGCCTATGAATCTATCCCTTCACAATATCCAAAATCTGTTGACTTCAATCTTGCTATCACTGACAGGAAGCACTTTCATATTTTTATTTTTGTATTGGTAGCAATAATTTTTGCCATCTTAGCAGCTGTTCTGCTGGCACACTTTTTACCACAGCAGCACAAGCATCAAGGGTCTTCAATCAATCTAAAACTGGCAATAAACCAGGCTCTAACATTTTATGATGCTCAAAAATCTGGACACTATCCAAGGAACAGTCCAGGTAAATTCCGCAGAGATTCAGGATTACAGGATGGGGATTTGTCTAAGACTGATTTTACTGGTGGATTTTATGATTCTGGCAACAACATTAAGTTTACCTTCACCACAGCTTATACTGTGACCTTGTTGAGTTGGACTGTTGTGGAGTATCGAAGTAAATATGCTGATATTGGTGAGCTTGATCATGTGAGTGATATCATCAGATGGGGTAGTGATTACCTGCTCAAGCAACGACCTGAAGATATGAAATATGAGAGACCAGTTTCAATTTGCGATGGCTCTGCTTCAGATTTAGCTGGTGAAATTGTGGCAGCATTATCTGCATCATCGATGGTATTCAAAGAAGACAAAGATTACTCAAGGAGACTTGTCCAAGCAGCAGAAAGCCTCTTTGAGGCGATCACAAGTGAAGATCCTTCAAAACAAGGGACCTACACCGTGGCTGAATGTGGGAAACAAGCAAGAATGCTTTACAACTCAACTAGCTACAAAGATGAGTTGGCTTGGGGAGCAACATGGTTATTTCTTGCCACTGAAAACGCTGATTACCTTGCAACTGCAACTGAAATTTTTTTATCAGCCAAGGGTTTTGCTTACCGTATTCGATACTTCCGTGATCCTGGCTTCCCACTTGAGGATGCTTTGAAACTCTCATCAAACTCTACCGATGCTCTCATGTGTTCTTATCTATTCAATAAATACTTTAGCAGGACATCTGCATCTTTTCTCAGTAAATTGTACAGTGATTACCATGATCATCTCAAAATATCTGGTGCAAGTTGCAAGACTGATGCATTCTCCATGGAAATGCTTCGTGATTTTTCAACTTCTCAGGCAAATTCTTAG 1221 0.4079 MRATLRYVHTVSEAGRLLPSASRWNFIVLDFKLAPNSSTAYESIPSQYPKSVDFNLAITDRKHFHIFIFVLVAIIFAILAAVLLAHFLPQQHKHQGSSINLKLAINQALTFYDAQKSGHYPRNSPGKFRRDSGLQDGDLSKTDFTGGFYDSGNNIKFTFTTAYTVTLLSWTVVEYRSKYADIGELDHVSDIIRWGSDYLLKQRPEDMKYERPVSICDGSASDLAGEIVAALSASSMVFKEDKDYSRRLVQAAESLFEAITSEDPSKQGTYTVAECGKQARMLYNSTSYKDELAWGATWLFLATENADYLATATEIFLSAKGFAYRIRYFRDPGFPLEDALKLSSNSTDALMCSYLFNKYFSRTSASFLSKLYSDYHDHLKISGASCKTDAFSMEMLRDFSTSQANS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02295 406 SUPERFAMILY Six-hairpin glycosidases 99 321 IPR008928 GO:0005975
Gma04g02295 406 PANTHER ENDOGLUCANASE 202 404 - -
Gma04g02295 406 PANTHER ENDO-1,4-BETA-GLUCANASE 202 404 - -
Gma04g02295 406 PANTHER ENDOGLUCANASE 15 201 - -
Gma04g02295 406 Pfam Glycosyl hydrolase family 9 104 314 IPR001701 GO:0004553|GO:0005975
Gma04g02295 406 PANTHER ENDO-1,4-BETA-GLUCANASE 15 201 - -
Gma04g02295 406 Gene3D - 98 329 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02295 Gma-Chr4 53402512 53404845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02295 50 403 Glycoside Hydrolase AT5G49720 34.396 4.69e-68 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02295 K01179 - gmx:100805472 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02295 04 53402512 53404845 Gma04g02295 04 53402512 53404845 ECH
Gma04g02295 04 53402512 53404845 Gma06g01106 06 10365488 10368063 GST