Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01042 ATGAGCTTCTTGAGGCCTTCTGCGTTGTACAACTTTCTGATCAGTTATCCTGCGCTGCGATGGCTGCCATGTCAGAGTTGGGGCTTCCTTCGATGGCCCGGCCTTGATGGGTTCTTCAGGCTTTTCGTGGTTGTGCTTCTGTGGTCTACACTATCCGAGCTTCGCTTCATACCCTCATCTTCTATGTACCCCACCCTTCGTGTTGGCGACCGAATTATTGTCGAAAAGGCTTCATATTACATCAGGAGTCCAGCTATACATGATATTGTAACATTTAAGGATCCAACACAGTCCTCTGGGGAAAACACAGATGCTGTTTTTATCAAGAGAATTGTTGCAAAAGCAGGAGACACTGTTGAGGTTAATCATGGGGCACTCTACATCAATGGTGTTGCTCAGCAGGAAGATTTCATAGCCGAGCCACCAGCATACGCAATGCAATTAACTGGGACCGCTTCCTGTGAAGAACATAGTTGGAAGATATGTCACGTGCTATCATAG 501 0.4671 MSFLRPSALYNFLISYPALRWLPCQSWGFLRWPGLDGFFRLFVVVLLWSTLSELRFIPSSSMYPTLRVGDRIIVEKASYYIRSPAIHDIVTFKDPTQSSGENTDAVFIKRIVAKAGDTVEVNHGALYINGVAQQEDFIAEPPAYAMQLTGTASCEEHSWKICHVLS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01042 166 CDD S26_SPase_I 53 113 IPR019533 GO:0004252|GO:0006465
Gma06g01042 166 PANTHER CHLOROPLAST PROCESSING PEPTIDASE-LIKE 1 149 - -
Gma06g01042 166 PANTHER SIGNAL PEPTIDASE I 1 149 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma06g01042 166 Pfam Signal peptidase, peptidase S26 40 143 IPR019533 GO:0004252|GO:0006465
Gma06g01042 166 ProSitePatterns Signal peptidases I serine active site. 59 66 IPR019756 GO:0004252|GO:0016021
Gma06g01042 166 SUPERFAMILY LexA/Signal peptidase 51 146 IPR036286 -
Gma06g01042 166 Gene3D Umud Fragment, subunit A 59 161 - -
Gma06g01042 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 50 66 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma06g01042 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 107 119 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma06g01042 166 TIGRFAM sigpep_I_bact: signal peptidase I 40 141 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01042 Gma-Chr6 9744505 9749855 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01042 K03100 - gmx:100306121 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01042 06 9744505 9749855 Gma06g01042 06 9744505 9749855 ECH
Gma04g02354 04 53963878 53965106 Gma06g01042 06 9744505 9749855 GST