Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02354 ATGCAGGTTAATCATGGGGCACTCTACATCAATGGTGTTGCTCAGCAGGAAGATTTCATAGCAGAGCCACCAGCATACACAATGCAATTAACTCATGTGCCCAATGGTCATGTTTATGTGTTGGGGGATAATCGTAACAATAGTTATGATTCCCATGTTTGGGGACCACTTCCTATAAAGAACATAATTGGAAGATATGTCACGTGCTATCTAGACCAAGAAACGGTTGACACAAATATCATTGAGATGTATTGA 255 0.4039 MQVNHGALYINGVAQQEDFIAEPPAYTMQLTHVPNGHVYVLGDNRNNSYDSHVWGPLPIKNIIGRYVTCYLDQETVDTNIIEMY 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02354 84 ProSitePatterns Signal peptidases I signature 3. 38 51 IPR019758 GO:0004252|GO:0016021
Gma04g02354 84 Gene3D Umud Fragment, subunit A 1 74 - -
Gma04g02354 84 CDD S26_SPase_I 38 65 IPR019533 GO:0004252|GO:0006465
Gma04g02354 84 TIGRFAM sigpep_I_bact: signal peptidase I 2 70 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma04g02354 84 PANTHER CHLOROPLAST PROCESSING PEPTIDASE-LIKE 2 70 - -
Gma04g02354 84 PANTHER SIGNAL PEPTIDASE I 2 70 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gma04g02354 84 Pfam Signal peptidase, peptidase S26 2 69 IPR019533 GO:0004252|GO:0006465
Gma04g02354 84 SUPERFAMILY LexA/Signal peptidase 3 72 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02354 Gma-Chr4 53963878 53965106 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02354 K03100 - gmx:100306121 149.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02354 04 53963878 53965106 Gma06g01042 06 9744505 9749855 GST