Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01036 ATGCCAGCTTCTCCTTCAGAGAACCGAACCAGATGGAGGAAGCGAAAGAGAGATTCGCAAATCAGCCGGCGCCACCAGAAGCACGAGGAGGAGGAGGACGACGACGAAGAAAACCCCAATGCGGCGGAGGAAGACCACGCCGAACGCGACTACGATTCGGAGGATCAGACGCACCACAACCACCCTAATTCGCAACCGCACGTGGAGGCCGAGGTTCTCTCTGACCACGGCGTTCAGATTTCGCAGTTCCCCGCGGTGATTAAGCGCTCCGTGAACCGCCCTCACTCCTCCGTCACCGCAATTGTTGCTCTGGAGCGAGCCCTCGAGTCCGGAGACAACAAGGCACAAAGCGCCCTCGATGCTCCGATTCTCGAGAACGTGTCTCACGGCCAGCTTCAAGCGCTATCGTCTGTTCCCTCTGATAACTTCGCTCTCGACTGTGATTCCTCTTTTGTCATCACTCCCCCTCCCATTTTGGAAGGTCGTGGCGTTGTTAAGCGCTTTGGAACTAAGGTTCTTGTAGTTCCAATGCATTCAGATTGGTTTTCGCCTGCCACGGTGCACAGGTTGGAGAGGCAAGTGGTGCCACATTTCTTTTCAGGGAAATCGCCGGATCATACTCCGGAGAAGTACATGGAATGTAGGAACTGCATTGTTGCTTTGCACATGGAGGACCCTGGGATGAGGATTACGGTTTCTGATTGTCAGGGTTTGTTGGCTGGGGTTAATGTTGAAGATTTGACTCGGATTGTTAGGTTCCTTGATCATTGGGGAATTATTAATTACTGTGTTCGGATACCAAGTCATGAGTCTCCCAATGCTGTGTCTTGCCTGAGGGATGAGCTGAGTGGAGAGGTCCGTGTGCCGTCGGAGGCTTTGAAATCCATAGACAGTTTGATCAAATTTGACAAGCCCAACTGTAAGCTGAAAGCAGACGAAATTTATTCGTCATTGACTGCACATAGTGCCGATGTCTTAGATCTGGAGGATAGAATAAGAGAGCATCTATCGGAGAATCATTGCAATTATTGTTCTTGTCCTCTTCCTGTTGTATACTATCAGTCTCAAAAGGAGGTTGATATTTTACTCTGCACTGATTGCTTTCATGACGGGAGATTTGTCATTGGTCATTCAAGTATAGATTTTGTAAGGGTGGATTCGACAAGGGATTATGGTGAACTAGATGGGGATAATTGGACTGATCAAGAAACTTTGCTGCTTCTTGAAGCAATGGAGATTTACAATGAGAATTGGAATGAAATAGCTGAGCATGTTGGTACCAAGTCAAAAGCACAATGCATTCTTCATTTTCTCCGTCTACCCATGGAAGATGGAAAATTTGAAAATATTAACGTTCCAAGTTTGTCTTTGTCATCCAATGCAATAAATAGAGATGATAGTGGAAGACTGCATTGCTACTCAAATGGAGTTACTGCAGGACCTGTCTATCAAACCAGAGATTCTGACCACCGGCTTCCTTTTGCAAATTCTGGAAATCCTGTTATGGCTTTGGTTGCCTTTTTAGCCTCTGCGGTTGGACCAAGAGTAGCTGCTTCTTGTGCCCATGCAGCGTTAGCAGTATTGTCAGAGGATAATTCTGGCAGCACGTCACAGTTGGAAGCACCAGGACATGATAATAGGACAAATTCAGAAAGCATACATTATCGAGATGGTGGCCCTCATCAAGAAACAGCAGTTTCAAATCATAATGAGGATAAGGCAAAGGTACATGGTTCATGGGGTATATATGAGGGTAGGACAACCCCACTCTCTGCTGAGAAAGTTAAAGATGCGGCTAAAGCTGGCCTTTCTGCTGCAGCCATGAAAGCAAAATTATTTTCCGATCACGAAGAACGAGAAATTCAGAGGTTATGTGCTAATATAGTTAATCATCAGCTGAAAAGATTGGAATTGAAGCTGAAACAGTTTGCAGAAATTGAAACATTGTTGATGAAAGAATGTGAACAACTGGAGAGAACAAAACAAAGGATAGCTGCTGATCGGTCCCGCATGATGTCAGCACGTCTTGGAACTGTGGGAGCCACACCCACAATGAATGCATCGGGTGTTGGTACTTCAATGGCTAGTAATGGCAACAATAGGCAACAAATAATCTCTGCTTCTTCCTCACAACCCAGCATTTCAGGCTATGGCAACAACCAACCAGTTCATCCACATATGTCCTTTGCCCCACGACCTTCAATGTTTGGGTTGGGGCAAAGATTGCCCCTATCTATGATACAACAATCACAATCAGCTTCTTCAACTGCCATGTTCAATGCCCCTAGTAATGTGCAGCCCACTACCAATCATCCATTGTTGAGGCCTGTATCGGGAACTAACTCTGGTTTAGGTTAA 2358 0.461 MPASPSENRTRWRKRKRDSQISRRHQKHEEEEDDDEENPNAAEEDHAERDYDSEDQTHHNHPNSQPHVEAEVLSDHGVQISQFPAVIKRSVNRPHSSVTAIVALERALESGDNKAQSALDAPILENVSHGQLQALSSVPSDNFALDCDSSFVITPPPILEGRGVVKRFGTKVLVVPMHSDWFSPATVHRLERQVVPHFFSGKSPDHTPEKYMECRNCIVALHMEDPGMRITVSDCQGLLAGVNVEDLTRIVRFLDHWGIINYCVRIPSHESPNAVSCLRDELSGEVRVPSEALKSIDSLIKFDKPNCKLKADEIYSSLTAHSADVLDLEDRIREHLSENHCNYCSCPLPVVYYQSQKEVDILLCTDCFHDGRFVIGHSSIDFVRVDSTRDYGELDGDNWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKFENINVPSLSLSSNAINRDDSGRLHCYSNGVTAGPVYQTRDSDHRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSEDNSGSTSQLEAPGHDNRTNSESIHYRDGGPHQETAVSNHNEDKAKVHGSWGIYEGRTTPLSAEKVKDAAKAGLSAAAMKAKLFSDHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQLERTKQRIAADRSRMMSARLGTVGATPTMNASGVGTSMASNGNNRQQIISASSSQPSISGYGNNQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSASSTAMFNAPSNVQPTTNHPLLRPVSGTNSGLG 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01036 785 Pfam SWIRM-associated region 1 601 676 IPR032451 -
Gma06g01036 785 SMART sant 395 443 IPR001005 -
Gma06g01036 785 MobiDBLite consensus disorder prediction 42 65 - -
Gma06g01036 785 SUPERFAMILY Homeodomain-like 172 267 IPR009057 -
Gma06g01036 785 Gene3D - 395 445 - -
Gma06g01036 785 MobiDBLite consensus disorder prediction 531 546 - -
Gma06g01036 785 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C 61 784 - -
Gma06g01036 785 SUPERFAMILY Homeodomain-like 396 449 IPR009057 -
Gma06g01036 785 MobiDBLite consensus disorder prediction 531 551 - -
Gma06g01036 785 ProSiteProfiles SWIRM domain profile. 173 271 IPR007526 GO:0005515
Gma06g01036 785 ProSiteProfiles Myb-like domain profile. 391 441 IPR001005 -
Gma06g01036 785 MobiDBLite consensus disorder prediction 748 785 - -
Gma06g01036 785 ProSiteProfiles Zinc finger ZZ-type profile. 336 390 IPR000433 GO:0008270
Gma06g01036 785 Pfam Myb-like DNA-binding domain 398 440 IPR001005 -
Gma06g01036 785 Gene3D - 179 266 IPR036388 -
Gma06g01036 785 PANTHER SWI/SNF COMPLEX-RELATED 61 784 - -
Gma06g01036 785 Pfam SWIRM domain 176 262 IPR007526 GO:0005515
Gma06g01036 785 MobiDBLite consensus disorder prediction 1 66 - -
Gma06g01036 785 ProSiteProfiles SANT domain profile. 394 445 IPR017884 -
Gma06g01036 785 CDD SANT 398 440 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01036 Gma-Chr6 9691489 9697758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01036 341 437 EF-hand Containing Proteins AT3G07740 33.962 2.87e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01036 K11649 - gmx:100790286 1545.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01036 06 9691489 9697758 Gma06g01036 06 9691489 9697758 ECH
Gma04g02361 04 53999977 54007438 Gma06g01036 06 9691489 9697758 GST
Gma14g01410 14 29946086 29951364 Gma06g01036 06 9691489 9697758 PCT
Gma06g01036 06 9691489 9697758 Gma14g01410 14 29946086 29951364 PCT