Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02361 ATGCCAGCCTCTCCTTCAGAGAACCGAACCAGATGGAGGAAGCGCAAGAGAGATTCGCAAATCAGCCGGCGCCACCAGAAGCACGAGGAGGACGACGACGACGACGACGAAAACCCCAATGCGGAGGAAGACCTCGCCGAACGCGACTACGATTCGGAGGACCAAACGCACCACAACCACCCTAATTCGCAACCTCACGTGGAGACGGAGGTCCTCTCCGACCACGGCGTTCAGATTTCGCAGTTCCCGGCGGTGATAAAGCGCTCCGTGAACCGCCCTCACTCCTCCGTCACCGCAATTGTTGCTCTGGAGCGTGCCCTCGAGTCCGGAGAGAATAAGGCTCCAAGCGCTCTCGCTGCTCCGGTTCTCGAAAACGTGTCTCACGGCCAGCTTCAAGCGCTGTCGTCTGTTCCCTCTGATAGCTTTGCTTTCGACGGTGATTCCTCTTTTGTCATCACTCCCCCTCCCATTTTGGAAGGTCGTGGCGTTGTTAAGCGCTATGGAACTAAGGCTCTTGTAGTTCCAATGCATTCAGATTGGTTTTCGCCTGCCACGGTGCACAGGTTGGAGAGGCAAGTGGTGCCGCATTTCTTTTCAGGGAAATCTCCGGATCATACTCCGGAGAAGTACATGGAGTGTAGGAACTGCATTGTTGCCTTGCACATGGAGGACCCAGGGAAGAGGATTACGGTTTCTGATTGCAAGGGTTTGTTGGCTGGGGTTAATGTTGAAGATTTGACTCGGATTGTTAGGTTCCTTGATCATTGGGGAATTATTAATTACTGTGTTCGGATGCCGAGTCATGAGTCTCCCAATGCTGTGTCTTGCCTAAGGGAGGAGACGAGTGGAGAGGTCCGTGTACCATCGGAGGCTTTGAAATCTATAGACAGTTTGATCAAATTTGACAAGCCCAACTGTAAACTGAAAGCAGACGAAATTTATTCGTCGTTGTCTGCACATAGTGCCGATGTCTTAGATCTGGAGGACAGAATAAGAGAGCATCTATCAGAGAATCACTGCAATTATTGTTCTTGTCCTCTTCCTGTTGTATACTATCAGTCTCAAAAAGAGGTTGATATTTTACTCTGCACTGATTGCTTTCATGATGGGAGATTTGTCATTGGTCATTCAAGTATAGATTTTGTAAGGGTGGATTCGACTAGGGATTATGGTGAACTAGATGGGGATAGTTGGACTGATCAAGAAACTTTGCTGCTTCTTGAAGCAATGGAGATTTACAATGAGAATTGGAATGAAATTGCTGAGCATGTTGGTACCAAGTCAAAAGCACAATGCATTCTTCATTTTCTCCGTCTACCCATGGAAGATGGAAAATTGGAAAATATTAACGTTCCAAGCATGTCTTTGTCATCCAATGCAATAAATAGAGATCATAGTGGAAGACTGCATTGTTACTCAAATGGAGATACTGCAGGAACTGTCCATCAAACCAGAGATTCTGACAATCGGCTTCCTTTTGCAAATTCTGGAAATCCTGTTATGGCTTTGGTTGCCTTTTTAGCTTCTGCGGTTGGACCAAGAGTAGCTGCTTCTTGTGCTCATGCAGCATTAGCAGTATTGTCAGAGGATAATTCTGGCAGCACGTCACAAATGGAAGCACCGGGACATGATAATAGGACAAATTCAGAAAACATACATTGTCGAGATGGTGGCCCTCATGGAGAAACAGCAGTTTCAAATAATCATAATGAGGATAAGGCAAAGGTGCGTGGTTCATGGGGTCTGAATGAGGGTAGGATAACCCCACTCTCTGCTGAGAAAGTTAAAGATGCGGCTAAAGCAGGCCTTTCTGCTGCAGCAATGAAAGCAAAATTATTTGCCGATCATGAAGAACGTGAAATTCAGAGGTTATGTGCTAATATAGTTAATCATCAGCTGAAAAGATTGGAATTGAAGCTGAAACAGTTTGCAGAAATTGAAACATTGTTGATGAAAGAATGCGAACAACTGGAGAGAACAAAGCAAAGGTGTGCTGCTGATCGGTCCCGCATAATGTCAGCACGTCTTGGAACTGTAGGAGCCACACCCACAATGAATGCATCGGGTGTTGGTCCCTCAATGGCTAGTAATGGCAACAATAGGCAACAGATGATCTCTGCTTCTTCTTCACAGCCCAGCGTCTCAGGGTATGGCAACAACCAACCAGTTCATCCACATATGTCCTTTGCCCCACGACCTTCAATGTTTGGGTTGGGGCAAAGATTGCCCCTATCTATGATACAACAATCACAACCAGCTTCTTCAACTGCCATGTTCAATGCCCCTAGTAATGTGCAGCCCACTACCAATCATCCATTGTTGAGGTCTGTATCGGGAACTAACTCTGGTTTAGGTTAA 2358 0.4648 MPASPSENRTRWRKRKRDSQISRRHQKHEEDDDDDDENPNAEEDLAERDYDSEDQTHHNHPNSQPHVETEVLSDHGVQISQFPAVIKRSVNRPHSSVTAIVALERALESGENKAPSALAAPVLENVSHGQLQALSSVPSDSFAFDGDSSFVITPPPILEGRGVVKRYGTKALVVPMHSDWFSPATVHRLERQVVPHFFSGKSPDHTPEKYMECRNCIVALHMEDPGKRITVSDCKGLLAGVNVEDLTRIVRFLDHWGIINYCVRMPSHESPNAVSCLREETSGEVRVPSEALKSIDSLIKFDKPNCKLKADEIYSSLSAHSADVLDLEDRIREHLSENHCNYCSCPLPVVYYQSQKEVDILLCTDCFHDGRFVIGHSSIDFVRVDSTRDYGELDGDSWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSMSLSSNAINRDHSGRLHCYSNGDTAGTVHQTRDSDNRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSEDNSGSTSQMEAPGHDNRTNSENIHCRDGGPHGETAVSNNHNEDKAKVRGSWGLNEGRITPLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQLERTKQRCAADRSRIMSARLGTVGATPTMNASGVGPSMASNGNNRQQMISASSSQPSVSGYGNNQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQPASSTAMFNAPSNVQPTTNHPLLRSVSGTNSGLG 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02361 785 Pfam SWIRM domain 175 261 IPR007526 GO:0005515
Gma04g02361 785 MobiDBLite consensus disorder prediction 695 716 - -
Gma04g02361 785 CDD SANT 397 439 IPR001005 -
Gma04g02361 785 SMART sant 394 442 IPR001005 -
Gma04g02361 785 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C 60 784 - -
Gma04g02361 785 ProSiteProfiles Myb-like domain profile. 390 440 IPR001005 -
Gma04g02361 785 Coils Coil 614 634 - -
Gma04g02361 785 MobiDBLite consensus disorder prediction 530 579 - -
Gma04g02361 785 MobiDBLite consensus disorder prediction 748 785 - -
Gma04g02361 785 ProSiteProfiles SANT domain profile. 393 444 IPR017884 -
Gma04g02361 785 MobiDBLite consensus disorder prediction 1 68 - -
Gma04g02361 785 Pfam Myb-like DNA-binding domain 397 439 IPR001005 -
Gma04g02361 785 MobiDBLite consensus disorder prediction 32 49 - -
Gma04g02361 785 MobiDBLite consensus disorder prediction 530 545 - -
Gma04g02361 785 Gene3D - 394 444 - -
Gma04g02361 785 Gene3D - 178 265 IPR036388 -
Gma04g02361 785 Pfam SWIRM-associated region 1 601 676 IPR032451 -
Gma04g02361 785 ProSiteProfiles SWIRM domain profile. 172 270 IPR007526 GO:0005515
Gma04g02361 785 SUPERFAMILY Homeodomain-like 395 448 IPR009057 -
Gma04g02361 785 SUPERFAMILY Homeodomain-like 171 265 IPR009057 -
Gma04g02361 785 PANTHER SWI/SNF COMPLEX-RELATED 60 784 - -
Gma04g02361 785 MobiDBLite consensus disorder prediction 50 64 - -
Gma04g02361 785 ProSiteProfiles Zinc finger ZZ-type profile. 335 389 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02361 Gma-Chr4 53999977 54007438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02361 340 436 EF-hand Containing Proteins AT3G07740 33.962 3.15e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02361 K11649 - gmx:100780440 1553.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02361 04 53999977 54007438 Gma04g02361 04 53999977 54007438 ECH
Gma04g02361 04 53999977 54007438 Gma06g01036 06 9691489 9697758 GST
Gma14g01410 14 29946086 29951364 Gma04g02361 04 53999977 54007438 PCT
Gma04g02361 04 53999977 54007438 Gma14g01410 14 29946086 29951364 PCT