Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01022 ATGGTTGCGAAAAGCAGGGGAATTCCATTGACGACGCTTTTACTCATTCTGTTCCTTTCTGCCATTGTCCCAACCTCTCTCTCGGATCAGGTTCTCAACTCCAAGAATCCAAGACCTTCAAGCTCTGCTTCTTCCCTTGGTTCCTCTGTTGCTTTTCAGATTAAAGGAAATGTATATCCACTTGGGTATTACACGGTGAGCCTTGCCATTGGCAATCCCCCCAAGGTTTATGATCTTGACATTGACACAGGTAGTGATCTCACTTGGGTTCAGTGTGATGCACCATGCCAAGGTTGCACCATACCTCGAAATCGACTTTATAAACCCAATGGCAACCTTGTGAAATGTGGGGATCCCTTGTGTAAAGCAATCCAGTCAGCACCAAACCATCACTGTGCTGGACCAAATGAGCAATGCGACTATGAGGTTGAGTATGCAGACCAAGGATCATCTCTCGGTGTGCTACTCAGAGATAATATTCCCCTTAAATTCACTAACGGGTCTTTAGCACGTCCTATCCTGGCTTTCGGGTGTGGATATGATCAAAAACATGTTGGTCATAATCCCTCAGCTTCCACAGCAGGGGTTCTTGGCCTTGGAAATGGCAAGACAAGCATTCTGTCTCAGCTTCACTCTCTTGGCCTAATTCGCAATGTGGTAGGCCACTGCTTAAGTGAAAGAGGAGGAGGCTTTTTATTCTTTGGAGATCAGCTTGTTCCCCAATCTGGAGTTGTTTGGACACCCTTATTGCAGAGTTCCTCCACACAACACTATAAAACAGGACCAGCAGACCTGTTTTTCGATAGAAAGCCTACTTCTGTGAAGGGCCTTCAACTTATCTTTGATAGTGGGAGCTCCTACACATACTTCAATTCCAAAGCTCATAAAGCTCTTGTTAATCTGGTAACTAATGATTTAAGGGGAAAGCCATTGAGTAGAGCAACTGAGGATTCATCACTACCAATTTGTTGGAGGGGTCCAAAGCCTTTCAAATCTCTGCATGATGTCACTAGCAATTTTAAGCCACTATTACTGAGCTTCACAAAATCAAAGAACTCGCTGCTGCAGCTACCACCAGAAGCTTATCTAATTGTCACTAAACATGGCAATGTCTGCTTGGGAATTCTAGATGGCACTGAAATAGGACTAGGAAATACTAACATAATTGGAGATATCTCTTTACAAGATAAGTTAGTGATTTATGACAACGAGAAACAGCAGATTGGATGGGCCTCTGCCAATTGTGATAGATCTTCCAATTCATAA 1266 0.436 MVAKSRGIPLTTLLLILFLSAIVPTSLSDQVLNSKNPRPSSSASSLGSSVAFQIKGNVYPLGYYTVSLAIGNPPKVYDLDIDTGSDLTWVQCDAPCQGCTIPRNRLYKPNGNLVKCGDPLCKAIQSAPNHHCAGPNEQCDYEVEYADQGSSLGVLLRDNIPLKFTNGSLARPILAFGCGYDQKHVGHNPSASTAGVLGLGNGKTSILSQLHSLGLIRNVVGHCLSERGGGFLFFGDQLVPQSGVVWTPLLQSSSTQHYKTGPADLFFDRKPTSVKGLQLIFDSGSSYTYFNSKAHKALVNLVTNDLRGKPLSRATEDSSLPICWRGPKPFKSLHDVTSNFKPLLLSFTKSKNSLLQLPPEAYLIVTKHGNVCLGILDGTEIGLGNTNIIGDISLQDKLVIYDNEKQQIGWASANCDRSSNS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01022 421 Gene3D Acid Proteases 39 236 IPR021109 -
Gma06g01022 421 SUPERFAMILY Acid proteases 57 418 IPR021109 -
Gma06g01022 421 CDD nucellin_like 62 415 IPR033823 GO:0004190
Gma06g01022 421 ProSiteProfiles Peptidase family A1 domain profile. 64 411 IPR033121 -
Gma06g01022 421 Pfam Xylanase inhibitor N-terminal 64 236 IPR032861 -
Gma06g01022 421 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 418 - -
Gma06g01022 421 Pfam Xylanase inhibitor C-terminal 277 411 IPR032799 -
Gma06g01022 421 PANTHER ASPARTYL PROTEASES 2 418 IPR001461 GO:0004190|GO:0006508
Gma06g01022 421 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 279 290 IPR001969 GO:0004190|GO:0006508
Gma06g01022 421 Gene3D Acid Proteases 237 420 IPR021109 -
Gma06g01022 421 PRINTS Pepsin (A1) aspartic protease family signature 70 90 IPR001461 GO:0004190|GO:0006508
Gma06g01022 421 PRINTS Pepsin (A1) aspartic protease family signature 279 290 IPR001461 GO:0004190|GO:0006508
Gma06g01022 421 PRINTS Pepsin (A1) aspartic protease family signature 387 402 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01022 Gma-Chr6 9547582 9550439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01022 48 417 Miscellaneous Gene Families AT1G44130 61.186 1.09e-173 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01022 - - gmx:100783194 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02013 04 50571611 50575242 Gma06g01022 06 9547582 9550439 GST
Gma14g01403 14 29697535 29700542 Gma06g01022 06 9547582 9550439 PCT