Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g02013 ATGAAGTCAGGGAAGTTGGGAATTTTGGTTCTGCTCGTCTTGTTCAGCTCTTCTACTTGTTCCGCTTGGTTTGGTAGTAAACACAAAAGTTCAAGTGGAAGGAGCTCCTTTCGTCCAGATGAAGCATCGTCATCGTCATCGTCGTCGTCGTCGTCACCATACATACTAAACCGTTTTCGTGCTGGCTCATCGGTCGTGTTCCCGGTTCACGGCAATGTTTACCCAGTTGGGTTTTATAATGTTACTCTCAACATCGGCCAACCACCCAGGCCATATTTTCTAGATATTGACACGGGTAGCGATCTCACCTGGCTTCAATGTGATGCCCCTTGTTCCCGTTGCTCTCAGACACCACATCCACTATACAGACCCAGCAATGACTTAGTGCCCTGCAGGCATGCCCTCTGTGCATCCTTGCACCTCAGTGATAACTACGACTGTGAAGTCCCACATCAATGTGACTACGAAGTTCAGTATGCAGATCATTACTCATCCCTTGGTGTACTTCTCCATGATGTCTACACTCTCAACTTTACAAATGGAGTCCAACTCAAAGTTCGTATGGCACTTGGGTGTGGATATGATCAGATTTTTCCAGATCCTTCTCACCACCCATTAGATGGAATGCTTGGCCTTGGCAGGGGAAAAACCAGCTTGACATCACAGCTGAATAGTCAGGGTTTGGTAAGAAATGTGATTGGGCACTGTTTGAGTGCACAAGGAGGAGGGTATATCTTCTTTGGAGATGTGTATGATTCTTTTAGACTAACTTGGACTCCAATGTCATCCAGAGATTACAAACATTACTCAGTCGCAGGGGCAGCTGAACTCCTTTTTGGAGGGAAGAAAAGTGGGGTTGGAAATCTTCATGCTGTTTTTGACACTGGGAGTTCTTACACCTATTTTAACTCTTATGCTTACCAAGTACTAATTTCTTGGTTGAAGAAGGAATCAGGTGGAAAGCCCCTAAAAGAAGCACATGATGATCAAACTCTCCCTCTTTGTTGGCGTGGTAGAAGACCTTTCAGAAGCATATACGAAGTGAGAAAATACTTCAAGCCAATTGTGCTTAGTTTCACCAGCAACGGGAGAAGTAAAGCTCAATTTGAAATGCTTCCTGAAGCATATCTGATAGTATCAAACATGGGAAATGTTTGCTTGGGCATTCTAAACGGCTCTGAAGTAGGGATGGGGGATCTGAACCTAATCGGAGACATATCCATGCTAAACAAAGTGATGGTATTTGACAACGACAAGCAGTTGATTGGTTGGGCACCAGCAGATTGTGACCAGGTTCCAAAATCCAGAGATGTCAGCATTTGA 1323 0.4467 MKSGKLGILVLLVLFSSSTCSAWFGSKHKSSSGRSSFRPDEASSSSSSSSSSPYILNRFRAGSSVVFPVHGNVYPVGFYNVTLNIGQPPRPYFLDIDTGSDLTWLQCDAPCSRCSQTPHPLYRPSNDLVPCRHALCASLHLSDNYDCEVPHQCDYEVQYADHYSSLGVLLHDVYTLNFTNGVQLKVRMALGCGYDQIFPDPSHHPLDGMLGLGRGKTSLTSQLNSQGLVRNVIGHCLSAQGGGYIFFGDVYDSFRLTWTPMSSRDYKHYSVAGAAELLFGGKKSGVGNLHAVFDTGSSYTYFNSYAYQVLISWLKKESGGKPLKEAHDDQTLPLCWRGRRPFRSIYEVRKYFKPIVLSFTSNGRSKAQFEMLPEAYLIVSNMGNVCLGILNGSEVGMGDLNLIGDISMLNKVMVFDNDKQLIGWAPADCDQVPKSRDVSI 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g02013 440 Gene3D Acid Proteases 57 249 IPR021109 -
Gma04g02013 440 Pfam Xylanase inhibitor N-terminal 79 249 IPR032861 -
Gma04g02013 440 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 434 - -
Gma04g02013 440 Gene3D Acid Proteases 250 433 IPR021109 -
Gma04g02013 440 PRINTS Pepsin (A1) aspartic protease family signature 85 105 IPR001461 GO:0004190|GO:0006508
Gma04g02013 440 PRINTS Pepsin (A1) aspartic protease family signature 291 302 IPR001461 GO:0004190|GO:0006508
Gma04g02013 440 PRINTS Pepsin (A1) aspartic protease family signature 401 416 IPR001461 GO:0004190|GO:0006508
Gma04g02013 440 PANTHER ASPARTYL PROTEASES 2 434 IPR001461 GO:0004190|GO:0006508
Gma04g02013 440 Pfam Xylanase inhibitor C-terminal 288 425 IPR032799 -
Gma04g02013 440 ProSiteProfiles Peptidase family A1 domain profile. 79 425 IPR033121 -
Gma04g02013 440 SUPERFAMILY Acid proteases 71 432 IPR021109 -
Gma04g02013 440 MobiDBLite consensus disorder prediction 25 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g02013 Gma-Chr4 50571611 50575242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g02013 63 435 Miscellaneous Gene Families AT1G44130 52.381 1.10e-143 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g02013 - - gmx:100812524 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02013 04 50571611 50575242 Gma04g02013 04 50571611 50575242 ECH
Gma04g02013 04 50571611 50575242 Gma06g01022 06 9547582 9550439 GST
Gma14g01403 14 29697535 29700542 Gma04g02013 04 50571611 50575242 PCT