Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00980 ATGCTGTTGCGCAACCCTGCGTTGACAGCGTCGCTGCTGTCAGCCACCACAAAGAAGCTCTGCAACCACCGTTGTTCTACACCTGCTGCATTAATGGCATCTTCAGGTGTGGCGTGCAGTTTGCTGGTTTTGTGTGGCAAATCACTGGCAGAGAATGAAACTGCTAAAGCTATAAAGACCAGTAGCACACTGAAGCTTCCCGAGGATGAAAAACTCTCGCTCGTTTTGCATTCGGAGATGGATAATTCTGTTATGCAAGGCTTTTTCCAAGTTCATTCCTACATGGATTCTCTTTCCACCAATCAATTTGGCAGGCTTCTCATTTGGTCTCCAGACTTAAATTCAACGCACGATATCGTTTCTCACAACTTTTGTGAGCTTCCCATTGGTACAGTTTCCATTGCTGATGTTCAGACCAAGGGACGAGGTCGGTCGAAGAATGTCTGGGAGTCTCCATTAGGTTGCCTCATGTTTTCTTTTACTATGCAAATGGAGGATGGACGAGTCGTTCCTTTGGTTCAGTATGTGGTTTCCCTTGCTATGACAGAGGCAATCAAGGATATCTGTGACAAAAATGGGTTACCCAGCATAGATGTTAGAATCAAGTGGCCAAATGATCTTTACTTAAATGGCTGTAAAGTTGGAGGCATTCTTTGTACCTCGACATATAAATCAAAGAAGTTCAATGTTAGTGCAGGAATAGGCTTGAATGTCAATAATAAGAACCCAACAACATCCTTAAATACAATTCTAAAAGGGTTCTATACAGGAGCTTACCAATTTCAAAGAGAAGATGTTCTAGCAGCCTTTTTTAACAAATTTGAGAAATTTTATGATTTATTTGTGAATCAAGGATTTCAAACCCTAGAGGAGCTTTATATCAAGACATGGTTGCACAGTGGACAGAGAGTTGTTGTACAGGAGAAGAATGAGGACAAAGTGATCGAACATGTGGTAACTATTCAGGGGTTGACATCCTCGGGATATTTGCTGGCTGTCGGTGATGACAATCATATGTGTGAGCTCCACCCTGATGGTAATAGCTTTGACTTTTTCAAAGGACTGGTCAGAAGGAAACTCCAGTGA 1086 0.4227 MLLRNPALTASLLSATTKKLCNHRCSTPAALMASSGVACSLLVLCGKSLAENETAKAIKTSSTLKLPEDEKLSLVLHSEMDNSVMQGFFQVHSYMDSLSTNQFGRLLIWSPDLNSTHDIVSHNFCELPIGTVSIADVQTKGRGRSKNVWESPLGCLMFSFTMQMEDGRVVPLVQYVVSLAMTEAIKDICDKNGLPSIDVRIKWPNDLYLNGCKVGGILCTSTYKSKKFNVSAGIGLNVNNKNPTTSLNTILKGFYTGAYQFQREDVLAAFFNKFEKFYDLFVNQGFQTLEELYIKTWLHSGQRVVVQEKNEDKVIEHVVTIQGLTSSGYLLAVGDDNHMCELHPDGNSFDFFKGLVRRKLQ 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00980 361 Pfam Biotin protein ligase C terminal domain 299 354 IPR003142 GO:0036211
Gma06g00980 361 PANTHER HOLOCARBOXYLASE SYNTHETASE (BIOTIN-(PROPRIONYL-COA-CARBOXYLASE (ATP-HYDROLYSING)) LIGASE) 44 359 - -
Gma06g00980 361 Pfam Biotin/lipoate A/B protein ligase family 114 237 IPR004143 GO:0036211
Gma06g00980 361 SUPERFAMILY Class II aaRS and biotin synthetases 94 297 IPR045864 -
Gma06g00980 361 Gene3D Bira Bifunctional Protein; Domain 2 95 296 IPR045864 -
Gma06g00980 361 PANTHER BIOTIN PROTEIN LIGASE 44 359 - -
Gma06g00980 361 TIGRFAM birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 111 334 IPR004408 GO:0004077|GO:0036211
Gma06g00980 361 CDD BPL 107 281 IPR004408 GO:0004077|GO:0036211
Gma06g00980 361 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 92 282 IPR004143 GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00980 Gma-Chr6 9154216 9159266 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00980 K01942 - gmx:100813650 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00980 06 9154216 9159266 Gma06g00980 06 9154216 9159266 ECH
Gma04g02416 04 54514434 54519939 Gma06g00980 06 9154216 9159266 GST