Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00941 ATGGCTGCTGAAGTATATTACCAGGCTATTGGCACTTTGCAGTCCCATTCTTATCTGAATAATTTAAATAATCACCAAAAACATCAAAACAATTTAGTAAGATTGGTGGCTAGGGATTTTATCAGCAGTAATGGCTTGTCAACGAGAAGAAGTAACCGCTCTGGCCAGAGGAATTGTTGTGTAATTCAATCCCTAGCTTCGCAAACATCAGTGGTTGATCCAGTGTTGTCCCCTTCAAGAAGCAACATTGGTGACACTCACAAGAAATCAAATGAAGCTGCTTTAATCCTTATTCGCCATGGTGAGTCGTTATGGAATGAGAAGAACTTATTCACAGGGTGTGTTGATGTCCCTCTCAGCAAGAAGGGTATAGATGAGGCAATTGAAGCTGGACAAAGAATTAGCAGCATTCCTGTTGATGTCATATTTACATCGGCTTTGATTCGTGCACAAATGACAGCCATGCTTGCCATGACCCAGCACCGTCGTGGGAAGGTCCCTATCTTTATGCATAATGAGAGTGAACAAGCAAGGTCATGGAGTCAAGTGTTTAGTGAAGATACAAAGAAACAGTCCATTCCAGTCATAGCAGCTTGGCAACTAAATGAAAGAATGTATGGGGAGCTGCAGGGTCTCAATAAGCAAGAAACAGCAGACAGATATGGGAAAGAACAAGTCCATGAGTGGCGACGAAGTTATGACATACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGAGCAGTTGCCTATTTCAGAGATCAAATTGAACCTCAACTTTTATCTGGAAAGAATGTTATGATTTCAGCCCATGGGAATTCATTGAGATCCATTATCATGTACCTTGATAAATTAACTTCCCAAGAGGTCATTAGTTTGGAACTGTCAACTGGAATTCCCATGCTTTACATTTTCAAAGAGGGAAGATTCATTAGGAGGGGGAGTCCCATAGGACCTTCCGAAGCTGGAGTTTATGCCTATACTAGGCGTTTGGCTCTTTACAAGCAGAAGTTGGATGACATGTTCCAATGA 1038 0.4162 MAAEVYYQAIGTLQSHSYLNNLNNHQKHQNNLVRLVARDFISSNGLSTRRSNRSGQRNCCVIQSLASQTSVVDPVLSPSRSNIGDTHKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGQRISSIPVDVIFTSALIRAQMTAMLAMTQHRRGKVPIFMHNESEQARSWSQVFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFRDQIEPQLLSGKNVMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPSEAGVYAYTRRLALYKQKLDDMFQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00941 345 SUPERFAMILY Phosphoglycerate mutase-like 95 311 IPR029033 -
Gma06g00941 345 PANTHER PHOSPHOGLYCERATE MUTASE 1 344 IPR005952 GO:0004619|GO:0006096|GO:0016868
Gma06g00941 345 Gene3D - 84 318 IPR029033 -
Gma06g00941 345 CDD HP_PGM_like 95 314 IPR013078 -
Gma06g00941 345 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 97 106 IPR001345 GO:0003824
Gma06g00941 345 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 1 344 - -
Gma06g00941 345 SMART PGAM_5 94 280 IPR013078 -
Gma06g00941 345 Pfam Histidine phosphatase superfamily (branch 1) 95 162 IPR013078 -
Gma06g00941 345 Pfam Histidine phosphatase superfamily (branch 1) 190 298 IPR013078 -
Gma06g00941 345 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 92 319 IPR005952 GO:0004619|GO:0006096|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00941 Gma-Chr6 8724394 8727061 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00941 K01834 - gmx:100802621 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00941 06 8724394 8727061 Gma06g00941 06 8724394 8727061 ECH
Gma04g00963 04 10052701 10056561 Gma06g00941 06 8724394 8727061 GST
Gma14g01706 14 46347637 46350649 Gma06g00941 06 8724394 8727061 PCT
Gma06g00941 06 8724394 8727061 Gma14g01706 14 46347637 46350649 PCT