Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00963 ATGCTTTGTCAATTTGTCGTGCCACTTGATACTCTTGACAATTACAACTACCTTCGCTTCTGTATTTACATTTTCTCCTTAAACTCATTCTTCGCACTCTTGCATTGCCTCCACCTCCTTTTCTCCATTTATAGTATAATGGCTGCTGAAGTATATTACCAGGCTATTGGTACTTTGCAGTCCCATTCTTATCTGAATAATTTAAATCATCACCAAAAGCATCAAAACAATTTAGTAACATTGGTGTCTAGGGATTTTATCAGCAGTAATGGCTTGTCAACGAGAAGAAGTAACTGCACTGGCCAGAGGAATTGTAGTGTAATTCGATCTCTAGCTTCGCAAACATCAGTCGTTGATCCAGTGTTGTCCCCTTCAAGAAGCAATGCTGGTGACACTTACAAGAAATCAAATGAAGCAGCTTTAATCCTTATTCGGCATGGTGAGTCGTTATGGAATGAGAAGAACTTATTCACAGGGTGTGTTGATGTCCCTCTAAGCAAGAAGGGTATAGATGAGGCAATTGAAGCTGGAAAAAGAATTAGCAGCATTCCTGTTGATGTAATATTTACATCAGCTTTGATTCGTGCACAAATGACAGCCATGCTTGCCATGACCCAGCACCGTCGTGGGAAGGTCCCTATCATGATGCACAATGAGAGTGAACAAGCAAGGTCATGGAGTCAAGTGTTTAGTGAAGATACAAAAAAGCAGTCCATTCCAGTCATAGCATCTTGGCAACTAAATGAAAGAATGTATGGGGAGCTGCAGGGTCTCAATAAGCAAGAAACAGCAGACAGATATGGGAAAGAACAAGTCCATGAGTGGCGACGAAGTTATGACATACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGAGCAGTTGCCTATTTCAGAGACCAAATTGAACCTCAACTTTTATCTGGAAAGAATGTTATGATTTCAGCCCATGGGAATTCATTGAGATCCATTATCATGTACCTTGATAAATTAACTTCCCAAGAGGTCATTAGTTTGGAACTGTCAACTGGAATTCCCATGCTTTACATTTTCAAAGAGGGAAGATTCATTAGGAGGGGGAGTCCCATAGGACCTTCTGAAGCTGGAGTTTATGCCTATACTAGGCGTTTGGCTCTTTACAAGCAGAAGTTGGACAACATGTTCCAATGA 1176 0.4082 MLCQFVVPLDTLDNYNYLRFCIYIFSLNSFFALLHCLHLLFSIYSIMAAEVYYQAIGTLQSHSYLNNLNHHQKHQNNLVTLVSRDFISSNGLSTRRSNCTGQRNCSVIRSLASQTSVVDPVLSPSRSNAGDTYKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRGKVPIMMHNESEQARSWSQVFSEDTKKQSIPVIASWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFRDQIEPQLLSGKNVMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPSEAGVYAYTRRLALYKQKLDNMFQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00963 391 SMART PGAM_5 140 326 IPR013078 -
Gma04g00963 391 Pfam Histidine phosphatase superfamily (branch 1) 236 344 IPR013078 -
Gma04g00963 391 Pfam Histidine phosphatase superfamily (branch 1) 141 208 IPR013078 -
Gma04g00963 391 Gene3D - 131 363 IPR029033 -
Gma04g00963 391 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 143 152 IPR001345 GO:0003824
Gma04g00963 391 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 31 390 - -
Gma04g00963 391 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 138 365 IPR005952 GO:0004619|GO:0006096|GO:0016868
Gma04g00963 391 PANTHER PHOSPHOGLYCERATE MUTASE 31 390 IPR005952 GO:0004619|GO:0006096|GO:0016868
Gma04g00963 391 SUPERFAMILY Phosphoglycerate mutase-like 141 357 IPR029033 -
Gma04g00963 391 CDD HP_PGM_like 141 360 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00963 Gma-Chr4 10052701 10056561 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00963 K01834 - gmx:100777582 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00963 04 10052701 10056561 Gma04g00963 04 10052701 10056561 ECH
Gma04g00963 04 10052701 10056561 Gma06g00941 06 8724394 8727061 GST
Gma14g01706 14 46347637 46350649 Gma04g00963 04 10052701 10056561 PCT
Gma04g00963 04 10052701 10056561 Gma14g01706 14 46347637 46350649 PCT